Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E11
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D31885-1|BAA06683.1|  226|Homo sapiens KIAA0069 protein.              112   9e-25
BC010281-1|AAH10281.1|  203|Homo sapiens ADP-ribosylation factor...   112   9e-25

>D31885-1|BAA06683.1|  226|Homo sapiens KIAA0069 protein.
          Length = 226

 Score =  112 bits (270), Expect = 9e-25
 Identities = 45/165 (27%), Positives = 92/165 (55%)
 Frame = +3

Query: 159 QVRKVKRTLXGWRVALLSLKSVILWEQQWHPCAIVGSMTIMYLLIWLLDLNTLASIAIVG 338
           +   ++  L GW   +L    V+ WE+ W P AI+G +++++L+I+ LD + L+ ++   
Sbjct: 38  ETASLEEQLQGWGEVMLMADKVLRWERAWFPPAIMGVVSLVFLIIYYLDPSVLSGVSCFV 97

Query: 339 LILNFVDFMVPVICNQLYGSSSWTGQHEKTFEEICXSIVISYNKLVIYIHSFYSLRDTSP 518
           + L   D++VP++  +++GS+ WT + ++ F EIC ++V +  + V +    ++L++  P
Sbjct: 98  MFLCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNLVKTRRRAVGWWKRLFTLKEEKP 157

Query: 519 FMYYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQRSGI 653
            MY+   I +L  VAW+   ++N+             PG+ + GI
Sbjct: 158 KMYFMTMIVSLAAVAWVGQQVHNLLLTYLIVTSLLLLPGLNQHGI 202


>BC010281-1|AAH10281.1|  203|Homo sapiens ADP-ribosylation
           factor-like 6 interacting protein 1 protein.
          Length = 203

 Score =  112 bits (270), Expect = 9e-25
 Identities = 45/165 (27%), Positives = 92/165 (55%)
 Frame = +3

Query: 159 QVRKVKRTLXGWRVALLSLKSVILWEQQWHPCAIVGSMTIMYLLIWLLDLNTLASIAIVG 338
           +   ++  L GW   +L    V+ WE+ W P AI+G +++++L+I+ LD + L+ ++   
Sbjct: 15  ETASLEEQLQGWGEVMLMADKVLRWERAWFPPAIMGVVSLVFLIIYYLDPSVLSGVSCFV 74

Query: 339 LILNFVDFMVPVICNQLYGSSSWTGQHEKTFEEICXSIVISYNKLVIYIHSFYSLRDTSP 518
           + L   D++VP++  +++GS+ WT + ++ F EIC ++V +  + V +    ++L++  P
Sbjct: 75  MFLCLADYLVPILAPRIFGSNKWTTEQQQRFHEICSNLVKTRRRAVGWWKRLFTLKEEKP 134

Query: 519 FMYYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQRSGI 653
            MY+   I +L  VAW+   ++N+             PG+ + GI
Sbjct: 135 KMYFMTMIVSLAAVAWVGQQVHNLLLTYLIVTSLLLLPGLNQHGI 179


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,744,671
Number of Sequences: 237096
Number of extensions: 1700898
Number of successful extensions: 7067
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7067
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)