Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E11
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094659-1|AAM11012.1|  197|Drosophila melanogaster AT23634p pro...   104   9e-23
AE014297-2249|AAF55348.1|  197|Drosophila melanogaster CG10326-P...   104   9e-23
BT011173-1|AAR88534.1|  471|Drosophila melanogaster SD13830p pro...    28   9.6  
AE013599-3836|AAF47179.1| 2175|Drosophila melanogaster CG3363-PA...    28   9.6  

>AY094659-1|AAM11012.1|  197|Drosophila melanogaster AT23634p
           protein.
          Length = 197

 Score =  104 bits (250), Expect = 9e-23
 Identities = 45/169 (26%), Positives = 93/169 (55%)
 Frame = +3

Query: 147 DQEQQVRKVKRTLXGWRVALLSLKSVILWEQQWHPCAIVGSMTIMYLLIWLLDLNTLASI 326
           DQ++ + K+K  L  +R A++    V+ WE+Q++   + G ++ +YL++W LDL+ +  +
Sbjct: 7   DQKRALNKLKHDLEPFRTAIVGAYGVLTWEKQYYAGVVFGVISCLYLVLWYLDLSLITLL 66

Query: 327 AIVGLILNFVDFMVPVICNQLYGSSSWTGQHEKTFEEICXSIVISYNKLVIYIHSFYSLR 506
           +++G+I   +++  P++   ++G  +W G  E  FE++C  +      LV++    ++ R
Sbjct: 67  SLLGVISILLNYAFPMVSRLIFGGVNWDGDQEAKFEDVCGQVCAVKGSLVVWYEYLFNER 126

Query: 507 DTSPFMYYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQRSGI 653
            ++ F+   +S+  L  +AWI + INN+            WPG+Q   I
Sbjct: 127 KSTVFV-IVMSLG-LLAMAWIGAIINNLLLMYLATLLILMWPGLQNKDI 173


>AE014297-2249|AAF55348.1|  197|Drosophila melanogaster CG10326-PA
           protein.
          Length = 197

 Score =  104 bits (250), Expect = 9e-23
 Identities = 45/169 (26%), Positives = 93/169 (55%)
 Frame = +3

Query: 147 DQEQQVRKVKRTLXGWRVALLSLKSVILWEQQWHPCAIVGSMTIMYLLIWLLDLNTLASI 326
           DQ++ + K+K  L  +R A++    V+ WE+Q++   + G ++ +YL++W LDL+ +  +
Sbjct: 7   DQKRALNKLKHDLEPFRTAIVGAYGVLTWEKQYYAGVVFGVISCLYLVLWYLDLSLITLL 66

Query: 327 AIVGLILNFVDFMVPVICNQLYGSSSWTGQHEKTFEEICXSIVISYNKLVIYIHSFYSLR 506
           +++G+I   +++  P++   ++G  +W G  E  FE++C  +      LV++    ++ R
Sbjct: 67  SLLGVISILLNYAFPMVSRLIFGGVNWDGDQEAKFEDVCGQVCAVKGSLVVWYEYLFNER 126

Query: 507 DTSPFMYYTISISTLCTVAWISSSINNIFXXXXXXXXXXXWPGIQRSGI 653
            ++ F+   +S+  L  +AWI + INN+            WPG+Q   I
Sbjct: 127 KSTVFV-IVMSLG-LLAMAWIGAIINNLLLMYLATLLILMWPGLQNKDI 173


>BT011173-1|AAR88534.1|  471|Drosophila melanogaster SD13830p
           protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = +2

Query: 113 RKNGREI*YSPRSGTASAKSKANFXRLACSLTLSEVCNIVGTTMASLCHC--GLND-NYV 283
           RK  +    +  +  A+A + A   +++    LSE C +  T +A L HC  GL   + V
Sbjct: 338 RKQKKHAAAAAAAAAAAAAAAAASAKISAP-ALSEPCFVKDTDLAKLKHCFVGLRRLSNV 396

Query: 284 SSHLVIRSQYSSFNCYCGSHS 346
            +       +  + C+CG  S
Sbjct: 397 ENLATFCMTHQLYKCFCGGDS 417


>AE013599-3836|AAF47179.1| 2175|Drosophila melanogaster CG3363-PA
            protein.
          Length = 2175

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = +2

Query: 113  RKNGREI*YSPRSGTASAKSKANFXRLACSLTLSEVCNIVGTTMASLCHC--GLND-NYV 283
            RK  +    +  +  A+A + A   +++    LSE C +  T +A L HC  GL   + V
Sbjct: 909  RKQKKHAAAAAAAAAAAAAAAAASAKISAP-ALSEPCFVKDTDLAKLKHCFVGLRRLSNV 967

Query: 284  SSHLVIRSQYSSFNCYCGSHS 346
             +       +  + C+CG  S
Sbjct: 968  ENLATFCMTHQLYKCFCGGDS 988


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,246,722
Number of Sequences: 53049
Number of extensions: 535297
Number of successful extensions: 1570
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)