Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E10
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0663 - 30991390-30992340 67 1e-11
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 61 7e-10
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 61 9e-10
05_07_0134 - 27911920-27912762 56 2e-08
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 34 0.001
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 40 0.001
06_01_0080 + 644021-645463 36 0.021
04_01_0035 - 433848-434372,434905-435381 31 1.1
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 29 2.4
03_05_0527 + 25220375-25221425,25221513-25222182,25222347-252224... 29 3.2
02_01_0384 - 2781362-2782299,2782320-2782428 29 3.2
06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216 29 4.3
10_08_0633 + 19446075-19446488,19446607-19446975,19447961-194480... 28 5.6
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 28 5.6
11_06_0743 + 26847652-26849424 28 7.5
06_03_0501 + 21476715-21476785,21477045-21477786,21478097-214782... 28 7.5
09_04_0520 + 18286435-18287279,18287818-18288697 27 9.9
07_01_0505 - 3759254-3759490,3759846-3759989,3760135-3760347,376... 27 9.9
>01_06_0663 - 30991390-30992340
Length = 316
Score = 66.9 bits (156), Expect = 1e-11
Identities = 47/147 (31%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Frame = +2
Query: 122 RAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXX 301
R S +T + VA++G G MG MA +L+ G+ + Y+ + G T A S
Sbjct: 13 RPISPDTTR-VAWVGTGVMGQSMAGHLLAAGYALTVYNRTASKAEGLVSRGATLAESPRA 71
Query: 302 XXXXXXXXXSILTSNKVVLDVYLGKD-GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEK 478
++ V L G +A G LL+D +T DP + +I A K
Sbjct: 72 AAAAADVIFLMVGFPSDVRSTSLDPSTGALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAK 131
Query: 479 GLGFTDAPVSGGVMGAXNATLAFMAGG 559
DAPVSGG GA +ATL+ AGG
Sbjct: 132 SCAAVDAPVSGGDRGARSATLSIFAGG 158
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 61.3 bits (142), Expect = 7e-10
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Frame = +2
Query: 92 STQCLYTAARRA----YSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNA 259
++Q +Y A++ A + T K + F+GLG MG MA++L+K GF+V YD K L
Sbjct: 302 ASQQIYDASKLADQLVMACKTAKTIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLAR 361
Query: 260 AAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLD-VYLGKDGVVAHAKKGSLLIDSSTID 436
G +S I+ +N+V + V G G V+ G+ +I SST+
Sbjct: 362 FTDLGGLTKDS-PEEVSKDVEILVIMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVS 420
Query: 437 PN-VPKQIFPIALE-KGLGFTDAPVSGGVMGAXNATL 541
P V K + E + + DAPVSGGV A TL
Sbjct: 421 PGFVIKLKERLEAECRDIKLVDAPVSGGVKRAAEGTL 457
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 60.9 bits (141), Expect = 9e-10
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Frame = +2
Query: 188 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 367
MA NLV G+ V +D +++ + + +G+ S ++L S+ VLDVY
Sbjct: 1 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 60
Query: 368 LGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQIFP----IALEKGLGFT------DAPVSG 511
G++G++A+ G L IDSST+DP ++I L++ + DAPVSG
Sbjct: 61 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 120
Query: 512 GVMGAXNATLAFMAGGRKEDF 574
GV A L FM GG +E +
Sbjct: 121 GVPAAEAGKLTFMVGGSEEAY 141
>05_07_0134 - 27911920-27912762
Length = 280
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +2
Query: 188 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 367
MAA L+ GF V Y + A G + A S +++ + V V
Sbjct: 1 MAARLLAAGFAVTAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVV 60
Query: 368 L-GKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAXNATLA 544
L GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA + LA
Sbjct: 61 LDAASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALA 120
Query: 545 FMAGG 559
+AGG
Sbjct: 121 LLAGG 125
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 33.9 bits (74), Expect(2) = 0.001
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2
Query: 152 VAFLGLGNMGGFMAANLVKKGFTV 223
V FLGLG MG MAANL++ GF V
Sbjct: 3 VGFLGLGIMGKAMAANLLRHGFRV 26
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 473 EKGLGFTDAPVSGGVMGAXNATLAFMAGGRK 565
+KG F +APVSG A + L +A G K
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDK 140
Score = 25.8 bits (54), Expect(2) = 0.001
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 344 NKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 436
N+ + V KDGV+ +G +D ST+D
Sbjct: 30 NRTLSKVVFDKDGVLEQIGEGKGYVDMSTVD 60
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/140 (23%), Positives = 54/140 (38%)
Frame = +2
Query: 77 ARTILSTQCLYTAARRAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALN 256
AR + S C +++ + V FLGLG MG MA+NL+ G V ++ ++ +
Sbjct: 30 ARLVFS--CSASSSSPSGEGGFSGKVGFLGLGIMGAPMASNLINAGCDVTVWNRTRSKCD 87
Query: 257 AAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 436
G S ++L + ++V G +G G +D ST+D
Sbjct: 88 PLLSLGAKYEPSPADVASSCDVTFAMLADPESAVEVACGANGAAQGMAPGKGYVDVSTVD 147
Query: 437 PNVPKQIFPIALEKGLGFTD 496
K I G F +
Sbjct: 148 AATSKLIGKHITSTGASFLE 167
>06_01_0080 + 644021-645463
Length = 480
Score = 36.3 bits (80), Expect = 0.021
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 7/149 (4%)
Frame = +2
Query: 152 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPAN-SIXXXXXXXXXXX 328
+ GL MG +A N+ +KGF + Y+ + ++ + N +
Sbjct: 6 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPASFVN 65
Query: 329 SILTSNKVVLDVYLGKD------GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 490
SI V++ V G + AH ++G +ID ++ E+GL +
Sbjct: 66 SIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERGLLY 125
Query: 491 TDAPVSGGVMGAXNATLAFMAGGRKEDFE 577
VSGG GA N + M GG E ++
Sbjct: 126 LGMGVSGGEEGARNGP-SLMPGGSFEAYK 153
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +2
Query: 113 AARRAY---SSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTP 283
AAR Y S + K+V +GLG++G +A L G T+ Y+ S+ ++ + N
Sbjct: 149 AARGDYPLGSKLSGKHVGIIGLGSIGSLIAKRLQAFGCTI-SYN-SRRPKDSVSYNYFPD 206
Query: 284 ANSIXXXXXXXXXXXSILTSNKVVLDVY----LGKDGVVAHAKKGSLLIDSSTI 433
+ ++ + ++D LGKDGVV + +G ++ ++ I
Sbjct: 207 VTDLAAASDVLIVACALNDETRHIVDSSVLEALGKDGVVVNIARGGIVDEAELI 260
>02_02_0184 -
7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 188 MAANLVKKGFTVRGYDPSKDALN 256
+A L+K+G RGYD SKD+ N
Sbjct: 251 VARRLLKQGLPFRGYDESKDSYN 273
>03_05_0527 +
25220375-25221425,25221513-25222182,25222347-25222440,
25222688-25222870
Length = 665
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -3
Query: 606 SHHFEERKDLSKSSLRPPAMKARVAX*APMTPPDTGASVNPSPFSKAIGKICLGTF 439
SHH + + + +S RPP + A AP PP GA N + ++A ++ LGTF
Sbjct: 314 SHHGQGQHNRGVAS-RPPMAPVQQA--AP-APPKPGAGFNCAEEAQAAPEVVLGTF 365
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -3
Query: 579 LSKSSLRPPAMKARVAX*APMTPPDTGASVNPSPFSKAIGKICLGTFG 436
LS ++ PA +R P +PP GAS P S A C G G
Sbjct: 206 LSPTTSASPASPSRTRLAPPRSPPAGGASGAPRRSSSAASPSCAGVEG 253
>06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216
Length = 218
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 401 FSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 282
F E + G A L WS W R R +H R Q W WL
Sbjct: 68 FMQEEGGKVFTGRMCATLPWWSTW-RGRWIHLRDQPWLWL 106
>10_08_0633 +
19446075-19446488,19446607-19446975,19447961-19448054,
19448137-19448174,19448770-19448916,19449580-19449679,
19449786-19450744,19451143-19451295
Length = 757
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 362 VYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAXNATL 541
V +G DG+V G L D + +VP I P + L +T GV +A +
Sbjct: 295 VCVGGDGIVNEVLNGLLCRDDQNVAVSVPIGIIPAGSDNSLVWTVL----GVKDPISAAM 350
Query: 542 AFMAGG 559
+ + GG
Sbjct: 351 SIVRGG 356
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 152 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 280
+A +G GN G F+A ++G T+ + S D + AA G +
Sbjct: 704 IAIVGFGNFGQFLARTFARQGHTLLAHSRS-DYSSLAASVGAS 745
>11_06_0743 + 26847652-26849424
Length = 590
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 353 RLYCWSIWKRPRRLHQRLQQWSWLAS-LRSWPLRS 252
R + W+ KR RL +RL+Q W+A+ +R + RS
Sbjct: 94 RRWSWTRGKRTPRLPERLKQRLWMANKIREFSTRS 128
>06_03_0501 +
21476715-21476785,21477045-21477786,21478097-21478246,
21478350-21478589,21479968-21480048,21480144-21480185,
21480953-21481033,21481271-21481368,21482574-21482667,
21482733-21482861,21483881-21483931,21484023-21484049,
21484280-21484387,21484956-21485201
Length = 719
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 8 WSCSGARAHGRTLN*EKNKFKMAARTILSTQCLYTAARRAYSSNTDKNVAFLGLGNMG 181
W CS A + + N++ TI + Q + R + NT+ + LG GNMG
Sbjct: 550 WWCSRAAKEQLSQSIRLNEYD----TITAFQVSFVCGTRHHVMNTEHTIISLGSGNMG 603
>09_04_0520 + 18286435-18287279,18287818-18288697
Length = 574
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 644 CXEPICPQWNCLAPITLRRGRTFRS 570
C EP C Q +C+AP T R F+S
Sbjct: 359 CIEPSCIQPSCVAPTTCFGPRFFKS 383
>07_01_0505 -
3759254-3759490,3759846-3759989,3760135-3760347,
3760439-3760990,3761339-3761806,3761959-3762023,
3762133-3762265,3763798-3764022
Length = 678
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 473 EKGLGFTDAPVSGGVMGAXNATLAFMAGG-RKEDFERSFLSSK*WELNSSTAD 628
++G+G T APV G + A +++L+ M + DF ++ +K + + S + D
Sbjct: 387 QQGVGATVAPVKGQELSASDSSLSVMKDQYNRADFVETYSDAKFFIIKSYSED 439
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,024,029
Number of Sequences: 37544
Number of extensions: 460818
Number of successful extensions: 1453
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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