Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E08
(642 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 65 7e-12
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 8e-05
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 41 1e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.020
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 33 0.035
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.14
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.14
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 29 0.43
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.57
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.3
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 27 1.7
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 5.3
SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces po... 25 7.0
SPBC2G2.06c |apl1||AP-2 adaptor complex subunit Apl1 |Schizosacc... 25 9.3
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 65.3 bits (152), Expect = 7e-12
Identities = 26/34 (76%), Positives = 32/34 (94%)
Frame = +2
Query: 440 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 541
G++S WRGN ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 86 GVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF 119
Score = 64.1 bits (149), Expect = 2e-11
Identities = 50/127 (39%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 265 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 441
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 442 SPFILAW*LRQRHQVLPDPGAQLRLQGQVQAGVPRRR*QERRSSGVTSLVIWPPGGAAGA 621
I W + + P L + + +ER GGAAGA
Sbjct: 87 --VISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAKWFAGNLASGGAAGA 144
Query: 622 TSLCFVY 642
SL FVY
Sbjct: 145 ASLLFVY 151
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +1
Query: 265 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 441
FA + +GG + A S V ++ + L S + ++++ G+VD + + + G
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDG 190
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.9 bits (94), Expect = 8e-05
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 441
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +G
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREG 71
Score = 32.7 bits (71), Expect = 0.046
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 440 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 535
GL+ F+RGN N +R FP A+ FA + KQ
Sbjct: 71 GLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ 102
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 41.1 bits (92), Expect = 1e-04
Identities = 36/124 (29%), Positives = 54/124 (43%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGSPF 450
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I G
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 451 ILAW*LRQRHQVLPDPGAQLRLQGQVQAGVPRRR*QERRSSGVTSLVIWPPGGAAGATSL 630
+ ++V P G + QV+ + R E + S G AG S+
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLS------GSLAGTCSV 131
Query: 631 CFVY 642
F Y
Sbjct: 132 FFTY 135
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.020
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 253 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 351
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 2.3
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +1
Query: 277 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 372
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.1 bits (72), Expect = 0.035
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 277 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 441
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEG 82
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.1 bits (67), Expect = 0.14
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 256 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 435
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 436 QG 441
G
Sbjct: 164 YG 165
Score = 29.9 bits (64), Expect = 0.33
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 262 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 438
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 439 G 441
G
Sbjct: 70 G 70
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 31.1 bits (67), Expect = 0.14
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGSP 447
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G P
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIP 263
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.5 bits (63), Expect = 0.43
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 220 IT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 354
+T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 34 LTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.57
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 369
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 360
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 440 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 562
G+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 66 GIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 268 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQ 438
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQE 155
Score = 25.4 bits (53), Expect = 7.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 455 WRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKDAVLAL 580
+RG ++ P +AL FA D Y +++ +KD+ AL
Sbjct: 65 YRGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPAL 106
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 419 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 312
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 351
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -1
Query: 621 GSGGT---TRRPDYQRSNARTASFLSTPPRNTCLYLSLKAK 508
G+GGT + ++S+ R ASF++ PP + LY +K K
Sbjct: 190 GTGGTFAGVTKYLKEKSDGRVASFVADPP-GSVLYSHIKTK 229
>SPBC2G2.06c |apl1||AP-2 adaptor complex subunit Apl1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 677
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 6 YCXPTPLGRTATRT*SDSNFQKRHTXXXXXXXXHYETYSK 125
YC P+P+ R TR + SN R + H ++ ++
Sbjct: 589 YCEPSPVLRLRTRDSNPSNTDSRESNHKKYNHFHQKSQTR 628
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,322,543
Number of Sequences: 5004
Number of extensions: 40257
Number of successful extensions: 146
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -