Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_E08
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 52 4e-07
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.016
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.028
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 33 0.26
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.46
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 32 0.46
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 0.60
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 31 1.1
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.4
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.8
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025) 29 3.2
SB_10896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_1493| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_912| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 440 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 541
G LSFWRGN AN IRYFPTQALNFAFKD+ K +F
Sbjct: 68 GFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF 101
Score = 59.7 bits (138), Expect = 2e-09
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Frame = +1
Query: 265 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 441
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 442 SPFILAW--*LRQRHQVLPDPGAQLRLQGQVQAGVPRRR*QERRSSGVTSLVIWPPGGAA 615
F+ W L + P + QV+A ++ S+ + GGAA
Sbjct: 69 --FLSFWRGNLANCIRYFPTQALNFAFKDQVKALFKPKK---TDSNAIKFSKNIASGGAA 123
Query: 616 GATSLCFVY 642
GA SL FVY
Sbjct: 124 GAMSLFFVY 132
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/57 (45%), Positives = 41/57 (71%)
Frame = +1
Query: 271 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 441
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEG 86
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 440 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 535
G+L +++GN NVIR FP A+ FA ++YK+
Sbjct: 86 GILGYFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 238 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDA 414
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 415 FVRIPKEQG 441
+R + +G
Sbjct: 61 TMRTYRAEG 69
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 235 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGI 405
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 406 VDAFVRIPKEQGS 444
D F I KE+G+
Sbjct: 79 KDCFRTILKEEGA 91
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +1
Query: 286 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 441
GG A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGG 188
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 440 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 562
G+ S WRGN ANVI+ P + F +K K+ L G D K
Sbjct: 188 GIKSLWRGNGANVIKIAPESGIKFFAYEKAKK--LVGSDTK 226
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 36.7 bits (81), Expect = 0.016
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Frame = +1
Query: 253 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGI 405
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGM 69
Query: 406 VDAFVRIPKEQGSPFILAW*LRQRHQVLPDPGAQLRLQGQVQA 534
+ V + K +G + + H+ L ++ L QV+A
Sbjct: 70 LGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKA 112
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 280 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 441
LAG S ++ V P E +K L VQHV+K ++ YKG+ A I +E+G
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTILREEG 207
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 259 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 438
+ + + FL GG SA ++++ +P+E VK+L QV + G++ F + K +
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108
Query: 439 G 441
G
Sbjct: 109 G 109
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 440 GLLSFWRGNFANVIRYFPTQALNFA 514
G+ +FW+GN + IR FP A+ +A
Sbjct: 109 GIKAFWKGNGVSCIRLFPYSAVQYA 133
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +1
Query: 292 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGSPFILAW*LR 471
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + L
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 472 QRHQVLPDPGAQL 510
Q V P+ +L
Sbjct: 980 QLLGVSPEKAIKL 992
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 31.9 bits (69), Expect = 0.46
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 202 IFT*LKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA 381
+F+ + S K+ DP + AG I+ + + P++RVK +LQ++ +
Sbjct: 117 LFSCVSFVKSYKLPVSKDP-ELLRSLAAGMIAGVATSFVLTPLDRVKCILQIE----KAF 171
Query: 382 ADQRYKGIVDAFVRIPKEQG 441
Y G VD RI +E G
Sbjct: 172 GGSSYGGPVDCLRRIYREAG 191
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 322 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 441
AP ERVK LLQVQ K+ RY+G+ D +++ + G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGG 215
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 289 GISAAVSKTAVAPIERVKLLLQVQH 363
G+S +KT AP+ER+K+L Q Q+
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN 87
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 440 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 535
GL +++GN N++R P A+ FA +++K+
Sbjct: 606 GLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 440 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 538
GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 25 GLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +1
Query: 277 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 441
F+ GG++ AVS+T P++ V+ +Q ++ + +Y ++ V + K+ G
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDG 227
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 241 SNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFV 420
SNL A +AGG + VS + P + +K +Q + RYKG++D +
Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179
Query: 421 RIPKEQG 441
+ KE+G
Sbjct: 180 QSYKEEG 186
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 283 AGGISAAVSKTAVAPIERVKLLLQ 354
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 455 WRGNFANVIRYFPTQALNFAFKDKYKQV 538
W G F++VI F A+N AF+++YK++
Sbjct: 282 WIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025)
Length = 1616
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = -2
Query: 623 VAPAAPPGGQITSEVTPELRLSCQRRRGTPACTCP*RRS*APGSGST**RWRSYHARMKG 444
V PA P + + P LR +C R T + TC GSG+ R ++ R
Sbjct: 1156 VEPAIPEWRNLKEVLVPSLRTTCPRTWQTTSRTCTYACGCRDGSGA---RLTNHEPRTAR 1212
Query: 443 DPCS 432
DP S
Sbjct: 1213 DPTS 1216
>SB_10896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 582 SNARTASFLSTPPRNTCLYLSLKAKLSAWVGKYLMTLAKLP 460
++A TAS TPP + +S L W ++TL ++P
Sbjct: 265 ASAETASHAQTPPTAGIMKISFHLNLVVWRDLKMLTLIRVP 305
>SB_1493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 132 GRVWSKFRNAAGAAEGRVC 76
G V+ K+R + GA EGRVC
Sbjct: 34 GNVFFKYRKSCGAYEGRVC 52
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 443 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 538
+L W G ++VI F A+N F+D+YK++
Sbjct: 145 VLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 605 PGGQITSEVTPELRLSCQRRRGT 537
P + +E P+L LSC +RRGT
Sbjct: 13 PSAVVNNEKHPQLPLSCGQRRGT 35
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,920,142
Number of Sequences: 59808
Number of extensions: 356952
Number of successful extensions: 1147
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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