Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E05
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.5  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    22   6.0  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    22   6.0  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   6.0  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   6.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 392 ETDIFGIHMYTGRSGGRPLAK 330
           ++ ++G H+Y GR+ G PL K
Sbjct: 632 DSPVWGRHIYDGRAMGFPLDK 652


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 392 ETDIFGIHMYTGRSGGRPLAK 330
           ++ ++G H+Y GR+ G PL K
Sbjct: 632 DSPVWGRHIYDGRAMGFPLDK 652


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 440  SEGIPRKPGRLHSSQSRAGGSDKXGQXSP 526
            S+ +PR+ GR     S+ GGS      SP
Sbjct: 1777 SQSMPRQNGRYSRVPSQGGGSGTHNVFSP 1805


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 78  FKIKCKAEINITVFEDIFCELLY 10
           FK  CK +I    F+D  CE+ +
Sbjct: 144 FKSTCKIDITWFPFDDQRCEMKF 166


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 78  FKIKCKAEINITVFEDIFCELLY 10
           FK  CK +I    F+D  C++ +
Sbjct: 107 FKSTCKIDITWFPFDDQHCDMKF 129


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 78  FKIKCKAEINITVFEDIFCELLY 10
           FK  CK +I    F+D  C++ +
Sbjct: 107 FKSTCKIDITWFPFDDQHCDMKF 129


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 78  FKIKCKAEINITVFEDIFCELLY 10
           FK  CK +I    F+D  C++ +
Sbjct: 175 FKSTCKIDITWFPFDDQHCDMKF 197


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 78  FKIKCKAEINITVFEDIFCELLY 10
           FK  CK +I    F+D  C++ +
Sbjct: 175 FKSTCKIDITWFPFDDQHCDMKF 197


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 14  SNSQKISSKTVIFISALHFILN*ALNAPYGSF 109
           S+ + IS+   + +SAL F +  + +A +G+F
Sbjct: 536 SDIKSISNNEQVKVSALGFFILISQDAKFGNF 567


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 14  SNSQKISSKTVIFISALHFILN*ALNAPYGSF 109
           S+ + IS+   + +SAL F +  + +A +G+F
Sbjct: 536 SDIKSISNNEQVKVSALGFFILISQDAKFGNF 567


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,116
Number of Sequences: 438
Number of extensions: 3155
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)