Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E02
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.10 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.72 
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       24   1.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   1.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.3  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    24   1.3  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   1.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   1.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   5.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   6.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   6.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 481 ENEDQITKKHVLKRKRMISSSSSDCDPPVEKKP-WKNDSEVCESKKFG 621
           E+ED+ TKK   K+K+ I    ++ +   + KP W  +++    +++G
Sbjct: 252 EDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKPIWTRNADDISQEEYG 299


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +2

Query: 23  FXDFSHCRSVIKNYLLNKLVINSINFGVLIEF*TINATSQTQTKKLSLK 169
           F   S  R V+  YLL  +V+  +   +L +  T        TKKL +K
Sbjct: 278 FFHLSDVRYVMVVYLLKNVVLYGLELFILAKIVTDLCQEANSTKKLIVK 326


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 457 TSSQFNELENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPW 582
           T ++F  LE E +    H L R+R I  + + C    + K W
Sbjct: 12  TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIW 53


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 457 TSSQFNELENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPW 582
           T +++  LE E +    H L R+R I  + + C    + K W
Sbjct: 229 TYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIW 270


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 258 NCWNNLILASIIQTKSTCNKQLWIDLYST 172
           NC+++ +L  I+        QLW + Y T
Sbjct: 147 NCFHSTLLLMILSRYQRLKAQLWQNRYET 175


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 457 TSSQFNELENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPW 582
           T +++  LE E +    H L R+R I  + + C    + K W
Sbjct: 11  TYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIW 52


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 457 TSSQFNELENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPW 582
           T ++F  LE E +    H L R+R I  + + C    + K W
Sbjct: 163 TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIW 204


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 457 TSSQFNELENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPW 582
           T ++F  LE E +    H L R+R I  + + C    + K W
Sbjct: 222 TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIW 263


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 553 CDPPVEKKPWK 585
           C+ P E+KPW+
Sbjct: 237 CEEPTEEKPWR 247



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +1

Query: 463 SQFNELENED--QITKKHVLKRKRMISSSSSDCDPPVEKK 576
           ++ ++LE  D  ++T KH+   +R  ++ S+  DP V  K
Sbjct: 70  ARHSKLEKADILEMTVKHLQNLQRQQAAMSAATDPSVVSK 109


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = -3

Query: 267 LFLNCWNNLILASIIQTKSTCNKQLWIDLYSTHFKDNFFVW--VWLVALIV 121
           L +N W N+           C K   + L + HF +  FV   V L  LIV
Sbjct: 601 LMINQWENVTNIQCPNADLPCPKDGHVILETFHFSEADFVMDVVMLAVLIV 651


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = -3

Query: 267 LFLNCWNNLILASIIQTKSTCNKQLWIDLYSTHFKDNFFVW--VWLVALIV 121
           L +N W N+           C K   + L + HF +  FV   V L  LIV
Sbjct: 601 LMINQWENVTNIQCPNADLPCPKDGHVILETFHFSEADFVMDVVMLAVLIV 651


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 241 DTGQYHPNKVD 209
           D G+YHP  +D
Sbjct: 39  DKGEYHPKNID 49


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 282 KTKFNLFLNCWN 247
           ++K ++F NCWN
Sbjct: 105 ESKCDVFWNCWN 116


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 282 KTKFNLFLNCWN 247
           ++K ++F NCWN
Sbjct: 105 ESKCDVFWNCWN 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,976
Number of Sequences: 336
Number of extensions: 3027
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)