Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_E02
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   1.6  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   4.8  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    24   4.8  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    24   4.8  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   6.4  
AY745223-1|AAU93490.1|   83|Anopheles gambiae cytochrome P450 pr...    23   8.4  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 238 YQIVPTVQEQIKFCFDILVEPFDGLPQLI 324
           Y+ + T+ EQI  CF+ ++E    LP+ I
Sbjct: 486 YKKLITIHEQIAACFNTVLEDSRKLPKFI 514


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 457 TSSQFNELENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPW 582
           T ++F  LE E +    H L R+R I  + + C    + K W
Sbjct: 144 TYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIW 185


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 457 TSSQFNELENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPW 582
           T +++  LE E +    H L R+R I  + + C    + K W
Sbjct: 225 TYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIW 266


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 457 TSSQFNELENEDQITKKHVLKRKRMISSSSSDCDPPVEKKPW 582
           T +++  LE E +    H L R+R I  + + C    + K W
Sbjct: 242 TYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIW 283


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 154 FCLGLASRINRLKFNKHTK 98
           FCLGL S +NR +  + T+
Sbjct: 350 FCLGLLSNVNRNEVVEQTR 368


>AY745223-1|AAU93490.1|   83|Anopheles gambiae cytochrome P450
           protein.
          Length = 83

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 178 IQVDPKLFVTCRL 216
           IQ+DPK F+ C L
Sbjct: 71  IQLDPKAFIVCPL 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,558
Number of Sequences: 2352
Number of extensions: 11845
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)