Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D21
         (550 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54348| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_47771| Best HMM Match : Annexin (HMM E-Value=0)                     28   5.8  
SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_30370| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.6  

>SB_54348| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 457 VHIKKKMLQATIEHRTNTPQNHNSTITITYKHY 359
           VH+ K+ +    + RTN P+NHNS +    K+Y
Sbjct: 112 VHMSKQPVNR--DPRTNIPKNHNSQVQSEMKNY 142


>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 529

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = -1

Query: 526 AITSVLLMLINLNLPFIYVDRLGVHIKKKMLQATIEHRTNTPQNHNSTITITYKHYVY 353
           A+TS+LL     ++  +Y    G+  K+  L  T+  R+NT    ++ + + Y   VY
Sbjct: 108 AVTSLLLPATQADVRSLYYAMKGLGTKEAQLIETLCTRSNTGDLRDALLLLAYGPNVY 165


>SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1400

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 108  VHNTISDWLTPR-KRLGXRFHRLLHSWVRLL 19
            +H+T  DW+TPR K L  R  R L  +V+ L
Sbjct: 930  LHDTDKDWITPRIKSLVARRQRALSRYVKPL 960


>SB_30370| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 129

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 1   WYKIRGQQPHPAMQQAMEPRSKSLSRRQPI 90
           W +++ Q   P  +   EPR   L+RRQ +
Sbjct: 47  WREVKNQDKKPKNKTVNEPRGMKLARRQSV 76


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,655,520
Number of Sequences: 59808
Number of extensions: 192465
Number of successful extensions: 376
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)