Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D20
         (522 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   4.7  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   6.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   6.2  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 147 RPFDEEESSLK*HGLSCTGASSKRAKRKNKQ 239
           RPFDE E  L   G+S    +  +A  + KQ
Sbjct: 730 RPFDERELELLISGISKIDVNDWKANTRLKQ 760


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 240 FACSSSWPFLNLRLYRTVHVTLARIPPHQMGGFT 139
           F CS S+  LNLR+  T H   A  P   + GFT
Sbjct: 312 FWCSISYYELNLRVGETFH---ASQPSITVDGFT 342


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 194  LYRRKFKKGQEEEQAKKRTXRTQKF 268
            LY+++ +KG   + + K   +T KF
Sbjct: 2017 LYKQQIRKGVNPDMSNKSVTKTVKF 2041


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,285
Number of Sequences: 2352
Number of extensions: 7383
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)