Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D19
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   0.97 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   3.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   3.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.8  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.8  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 0.97
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 241 FRRNFVEFVFFIHGFNPIPACLRASRQRSVKDXVIIF 131
           F++NF   V   H      A +R   Q+ + D  +IF
Sbjct: 81  FQKNFTNIVNLTHLLETQYAKIRTENQKKIFDESVIF 117


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 60  CRNDPNGDQVVSKFC 104
           C +DPNG+  + K C
Sbjct: 156 CNDDPNGNVPLGKSC 170



 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 312 DETNPPKQTPTNAPHN 265
           D++N P+  P N  HN
Sbjct: 222 DDSNIPQNNPKNKQHN 237


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 500 DMQILLWLSX*TFL*K*LISIPTCRHLWQIQ 408
           D  +  WLS      K  +S+P   H W +Q
Sbjct: 226 DSSVQSWLSGGASASKVTLSVPFYGHSWYLQ 256


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 247 YSCAIHIVRCICWCLF 294
           +S    IVR +C CLF
Sbjct: 324 WSFGFLIVRTVCLCLF 339


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 247 YSCAIHIVRCICWCLF 294
           +S    IVR +C CLF
Sbjct: 324 WSFGFLIVRTVCLCLF 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,931
Number of Sequences: 336
Number of extensions: 2830
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)