Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_D19
(535 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21274| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_54445| Best HMM Match : CMV_US (HMM E-Value=3.9) 33 0.19
SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_615| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_53670| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 29 2.4
SB_50758| Best HMM Match : DUF1545 (HMM E-Value=3.6) 29 2.4
SB_37136| Best HMM Match : PI3Ka (HMM E-Value=1.7) 29 2.4
SB_32887| Best HMM Match : DUF1545 (HMM E-Value=3.6) 29 2.4
SB_11924| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 29 2.4
SB_9784| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.36) 29 2.4
SB_8618| Best HMM Match : zf-C2H2 (HMM E-Value=5.7) 29 2.4
SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_4537| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 29 2.4
SB_58184| Best HMM Match : DUF1545 (HMM E-Value=3.6) 29 2.4
SB_11739| Best HMM Match : DUF1545 (HMM E-Value=3.6) 29 2.4
SB_21527| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_6527| Best HMM Match : CMV_US (HMM E-Value=3.1) 29 3.2
SB_59790| Best HMM Match : VWA (HMM E-Value=0) 24 3.2
SB_32712| Best HMM Match : PAN (HMM E-Value=0.18) 28 4.2
SB_45202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_31559| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37) 28 5.5
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_43080| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_41350| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_35757| Best HMM Match : Extensin_2 (HMM E-Value=4.7) 27 7.3
SB_50380| Best HMM Match : PMC2NT (HMM E-Value=2.4) 27 9.6
SB_45113| Best HMM Match : CemA (HMM E-Value=6) 27 9.6
SB_9718| Best HMM Match : Metallothio_2 (HMM E-Value=1.3) 27 9.6
SB_7559| Best HMM Match : Metallothio_2 (HMM E-Value=2) 27 9.6
>SB_21274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/120 (24%), Positives = 57/120 (47%)
Frame = +2
Query: 176 QTGWDRVKAMYKKNEFDEVSPELHTVVQSTLCGAXXXXXXXXXXSSREAYLYFIENNQAT 355
++GWDRVKA+ + ++ ++++ E+ + G+ R F+ N+ T
Sbjct: 6 KSGWDRVKALVQLDDNNQLAEEVQDIPTIICVGSIFGFLLGGQYGVRIRADSFLRQNKLT 65
Query: 356 AYKTVXDAXKKLQXYVTIGFAKGAYKWGWKLTIFTGMFXLIATTISAYRGDTTLIXYTTA 535
YK+ A + Q T+GF + +WGW++ F G++ + ++YR + Y A
Sbjct: 66 VYKSAMHAQRSFQSAKTLGFVRYGCRWGWRVGWFAGLYSFMLAATTSYRNKEDALNYVAA 125
>SB_54445| Best HMM Match : CMV_US (HMM E-Value=3.9)
Length = 460
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C+ND Q+VSK CL F K+ +T+ + D CL
Sbjct: 112 LKGSGGGCKNDRQAQQLVSK-CLRFLKFCSKDEDHLTLDIVDFCL 155
>SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 31.1 bits (67), Expect = 0.59
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 364 NSXRCKXKTAXLCNNWICQRCLQVGMEINYFYRNVXFDSHNNICISWRYNTHRXHNC 534
NS + L +N + C+ G + NY +N+ NNIC WR +T +NC
Sbjct: 368 NSLHDNALSMYLESNNDLRLCINNGYK-NYLTQNLRIGQWNNICTQWR-STDGEYNC 422
>SB_615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 112 LKSSGGGCKSDRQAQQLVSK-CLKFLRFCSEDEDHLTLDIVDFCL 155
>SB_53670| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 428
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 40 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 83
>SB_50758| Best HMM Match : DUF1545 (HMM E-Value=3.6)
Length = 410
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 112 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 155
>SB_37136| Best HMM Match : PI3Ka (HMM E-Value=1.7)
Length = 477
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 31 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 74
>SB_32887| Best HMM Match : DUF1545 (HMM E-Value=3.6)
Length = 264
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 110 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 153
>SB_11924| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 511
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 31 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 74
>SB_9784| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.36)
Length = 534
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 112 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 155
>SB_8618| Best HMM Match : zf-C2H2 (HMM E-Value=5.7)
Length = 293
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 112 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 155
>SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 82 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 125
>SB_4537| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 593
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 112 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 155
>SB_58184| Best HMM Match : DUF1545 (HMM E-Value=3.6)
Length = 251
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 112 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 155
>SB_11739| Best HMM Match : DUF1545 (HMM E-Value=3.6)
Length = 540
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 112 LKGSGGGCKSDRQAQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 155
>SB_21527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 527
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q++SK CL F ++ +T+ + D CL
Sbjct: 90 LKGSGGGCKSDRQAQQLISK-CLKFLKFCSEDEDHLTLDIVDFCL 133
>SB_6527| Best HMM Match : CMV_US (HMM E-Value=3.1)
Length = 340
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q++SK CL F ++ +T+ + D CL
Sbjct: 90 LKGSGGGCKSDRQAQQLISK-CLKFLKFCSEDEDHLTLDIVDFCL 133
>SB_59790| Best HMM Match : VWA (HMM E-Value=0)
Length = 4151
Score = 23.8 bits (49), Expect(2) = 3.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -1
Query: 307 DKSSETNTNKCTAQCGLHNCMQFRRNFVEFVFFIHGFNPIP 185
D+ S + + + M R+ V F+F I+ NPIP
Sbjct: 3842 DRWSTRTPSSSVGHVVVRDIMVDERHRVSFIFAIYAPNPIP 3882
Score = 23.0 bits (47), Expect(2) = 3.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 196 NPIPACLRASRQRSVK 149
NPI AC RA+ +R K
Sbjct: 3918 NPITACFRAALKRGYK 3933
>SB_32712| Best HMM Match : PAN (HMM E-Value=0.18)
Length = 542
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSK-FCLTNFFVKEMKMITMSLTDLCL 167
+K +G C++D Q+VSK + + ++ +T+ + D CL
Sbjct: 366 LKGSRGGCKSDRQAQQLVSKCWKILKICSEDEDHLTLDIVDFCL 409
>SB_45202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 253 CAIHIVRCICWCLFRRICLI 312
C + V+ +CWC +CL+
Sbjct: 275 CLLSDVQAVCWCTMSAVCLV 294
>SB_31559| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.37)
Length = 554
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 39 IKKGKGSCRNDPNGDQVVSKFCL--TNFFVKEMKMITMSLTDLCL 167
+K G C++D Q+VSK CL F ++ +T+ + D CL
Sbjct: 73 LKGSGGGCKSDRQVQQLVSK-CLKFLKFCSEDEDHLTLDIVDFCL 116
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +2
Query: 317 EAYLYFIENNQATAYKTVXDAXKKLQXYVTIGFAKGAYKWGWKLTIFTGMFXLIATTISA 496
EA+ F + A KT A L VTIG +W W T G++ IA + +
Sbjct: 162 EAFRDFTHSTMAGRIKTASIAASFLATMVTIGILIN--RWFWFETTNGGLYSWIAFSPAD 219
Query: 497 YR 502
+R
Sbjct: 220 FR 221
>SB_43080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 410 GFAKGAYKWGWKLTIFTGMFXLIATTISAYRG 505
G A A+KWGW+ I F + TI + G
Sbjct: 26 GTANTAWKWGWEFHIALFCFSFLVLTIYSLCG 57
>SB_41350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -3
Query: 302 ILRNKHQQMHRTMWIAQLYAVQEKLRRIRFFY 207
I + +H HRT W+ L + ++R R+++
Sbjct: 27 ITKERHHHFHRTSWLLLLNVIIIAIQRHRYYH 58
>SB_35757| Best HMM Match : Extensin_2 (HMM E-Value=4.7)
Length = 211
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 144 MSLTDLCLEALRQAGIGLKPCIKKTNSTKFLLN-CIQLCNPHCAVHLLVFVS 296
+ LT+ CL+ Q C++ TN L+N C+QL N + + V+ S
Sbjct: 2 LQLTNQCLQLSNQCLQLTSQCLQLTNQCLHLINQCLQLTNSVYNLQISVYNS 53
>SB_50380| Best HMM Match : PMC2NT (HMM E-Value=2.4)
Length = 362
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 311 MRQILRNKHQQMHRTMWIAQLYAVQEKLR 225
M ++L KHQQ + W+ Y V++ +R
Sbjct: 248 MGEVLHYKHQQGTKDSWLNTFYEVRDAIR 276
>SB_45113| Best HMM Match : CemA (HMM E-Value=6)
Length = 363
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 311 MRQILRNKHQQMHRTMWIAQLYAVQEKLR 225
M ++L KHQQ + W+ Y V++ +R
Sbjct: 248 MGEVLEYKHQQGTKDSWLNTFYEVRDAIR 276
>SB_9718| Best HMM Match : Metallothio_2 (HMM E-Value=1.3)
Length = 279
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 311 MRQILRNKHQQMHRTMWIAQLYAVQEKLR 225
M ++L KHQQ + W+ Y V++ +R
Sbjct: 165 MGEVLHYKHQQGTKDSWLNTFYEVRDAIR 193
>SB_7559| Best HMM Match : Metallothio_2 (HMM E-Value=2)
Length = 532
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 311 MRQILRNKHQQMHRTMWIAQLYAVQEKLR 225
M ++L KHQQ + W+ Y V++ +R
Sbjct: 418 MGEVLHYKHQQGTKDSWLNTFYEVRDAIR 446
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,316,034
Number of Sequences: 59808
Number of extensions: 352053
Number of successful extensions: 1011
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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