Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_D15
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 261 2e-69
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 260 2e-69
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 260 2e-69
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 260 2e-69
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 260 2e-69
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 260 2e-69
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 260 2e-69
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 260 2e-69
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 260 4e-69
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 260 4e-69
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 252 1e-66
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 252 1e-66
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 252 1e-66
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 252 1e-66
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 252 1e-66
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 252 1e-66
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 238 1e-62
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 94 4e-19
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.5
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.6
BC063500-1|AAH63500.2| 591|Homo sapiens tigger transposable ele... 30 6.2
BC035143-1|AAH35143.2| 591|Homo sapiens tigger transposable ele... 30 6.2
AK056329-1|BAB71153.1| 591|Homo sapiens protein ( Homo sapiens ... 30 6.2
AC092165-4|AAY24104.1| 591|Homo sapiens unknown protein. 30 6.2
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 8.2
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 8.2
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 8.2
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 261 bits (639), Expect = 2e-69
Identities = 121/185 (65%), Positives = 140/185 (75%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 89.0 bits (211), Expect = 1e-17
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIF 47
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 260 bits (638), Expect = 2e-69
Identities = 121/185 (65%), Positives = 140/185 (75%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 260 bits (638), Expect = 2e-69
Identities = 121/185 (65%), Positives = 140/185 (75%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 260 bits (638), Expect = 2e-69
Identities = 121/185 (65%), Positives = 140/185 (75%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 260 bits (638), Expect = 2e-69
Identities = 121/185 (65%), Positives = 140/185 (75%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 260 bits (638), Expect = 2e-69
Identities = 121/185 (65%), Positives = 140/185 (75%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 260 bits (638), Expect = 2e-69
Identities = 121/185 (65%), Positives = 140/185 (75%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 260 bits (638), Expect = 2e-69
Identities = 121/185 (65%), Positives = 140/185 (75%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P +IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 260 bits (636), Expect = 4e-69
Identities = 117/165 (70%), Positives = 136/165 (82%)
Frame = +1
Query: 157 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 336
P P +IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+K
Sbjct: 16 PHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDK 75
Query: 337 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 516
T E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLI
Sbjct: 76 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 135
Query: 517 KVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGTIVSRE 651
KVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G I +RE
Sbjct: 136 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRE 180
Score = 51.2 bits (117), Expect = 3e-06
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +3
Query: 108 MLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MLDKL GV+APRPS GPHKLRECLPL F
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIF 28
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 260 bits (636), Expect = 4e-69
Identities = 117/165 (70%), Positives = 136/165 (82%)
Frame = +1
Query: 157 PTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 336
P P +IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+K
Sbjct: 15 PHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDK 74
Query: 337 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 516
T E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLI
Sbjct: 75 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 134
Query: 517 KVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGTIVSRE 651
KVND+IQ+D+ T I DFIKF++GNLCM+TGG NLGR+G I +RE
Sbjct: 135 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRE 179
Score = 54.0 bits (124), Expect = 4e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +3
Query: 114 DKLGGVYAPRPSTGPHKLRECLPLADF 194
DKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIF 27
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 115/185 (62%), Positives = 138/185 (74%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T I++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 252 bits (616), Expect = 1e-66
Identities = 115/185 (62%), Positives = 138/185 (74%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 14 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 73
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 74 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 133
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T I++FIKF++GNLCM+ GG NLGRVG
Sbjct: 134 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 193
Query: 637 IVSRE 651
I +RE
Sbjct: 194 ITNRE 198
Score = 89.0 bits (211), Expect = 1e-17
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +3
Query: 57 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 46
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 115/185 (62%), Positives = 138/185 (74%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T I++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 115/185 (62%), Positives = 138/185 (74%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T I++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 115/185 (62%), Positives = 138/185 (74%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T I++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 252 bits (616), Expect = 1e-66
Identities = 115/185 (62%), Positives = 138/185 (74%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P ++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T I++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 238 bits (583), Expect = 1e-62
Identities = 109/185 (58%), Positives = 133/185 (71%)
Frame = +1
Query: 97 PKHGCWTNLAVCMHRDRQPVPTSCASACPWLIFLRNRLKYALTGNEVLKIVKQRLIKVDG 276
PKH L P P ++FLRNRLKYALTG+EV KI Q +K+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDG 74
Query: 277 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 456
KVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTK 134
Query: 457 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTXIMDFIKFESGNLCMITGGRNLGRVGT 636
+P+LVTHD RTIRYPDPLIKVND++Q+D+ T I FIKF++GN+CM+ G NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGV 194
Query: 637 IVSRE 651
I +RE
Sbjct: 195 ITNRE 199
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADF 194
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 93.9 bits (223), Expect = 4e-19
Identities = 42/59 (71%), Positives = 46/59 (77%)
Frame = +3
Query: 54 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLADFPEESSEVCFDRK 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F + DR+
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALDRR 59
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 295 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 441
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 295 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 441
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>BC063500-1|AAH63500.2| 591|Homo sapiens tigger transposable
element derived 1 protein.
Length = 591
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = -2
Query: 414 LSLLRGDTVDCESALNIID*TKQFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQD 235
++++ T D E +N++D ++ N +SS + ++ N I Y +FH +
Sbjct: 482 VNIVEMTTKDLEYYINLVDKAAAGFERID-SNFERSSTVGKMLSN-SIACYREIFHERKS 539
Query: 234 FV----SGQSILQTIPQENQPGASTRAT 163
+ S S + +PQ QP A+T T
Sbjct: 540 QLMRKASPMSYFRKLPQPPQPSAATTLT 567
>BC035143-1|AAH35143.2| 591|Homo sapiens tigger transposable
element derived 1 protein.
Length = 591
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = -2
Query: 414 LSLLRGDTVDCESALNIID*TKQFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQD 235
++++ T D E +N++D ++ N +SS + ++ N I Y +FH +
Sbjct: 482 VNIVEMTTKDLEYYINLVDKAAAGFERID-SNFERSSTVGKMLSN-SIACYREIFHERKS 539
Query: 234 FV----SGQSILQTIPQENQPGASTRAT 163
+ S S + +PQ QP A+T T
Sbjct: 540 QLMRKASPMSYFRKLPQPPQPSAATTLT 567
>AK056329-1|BAB71153.1| 591|Homo sapiens protein ( Homo sapiens
cDNA FLJ31767 fis, clone NT2RI2007884, weakly similar to
ARS BINDING PROTEIN 1. ).
Length = 591
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = -2
Query: 414 LSLLRGDTVDCESALNIID*TKQFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQD 235
++++ T D E +N++D ++ N +SS + ++ N I Y +FH +
Sbjct: 482 VNIVEMTTKDLEYYINLVDKAAAGFERID-SNFERSSTVGKMLSN-SIACYREIFHERKS 539
Query: 234 FV----SGQSILQTIPQENQPGASTRAT 163
+ S S + +PQ QP A+T T
Sbjct: 540 QLMRKASPMSYFRKLPQPPQPSAATTLT 567
>AC092165-4|AAY24104.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 30.3 bits (65), Expect = 6.2
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = -2
Query: 414 LSLLRGDTVDCESALNIID*TKQFISLLN*DNIHKSSRISRVSPNFPINLYEALFHNFQD 235
++++ T D E +N++D ++ N +SS + ++ N I Y +FH +
Sbjct: 482 VNIVEMTTKDLEYYINLVDKAAAGFERID-SNFERSSTVGKMLSN-SIACYREIFHERKS 539
Query: 234 FV----SGQSILQTIPQENQPGASTRAT 163
+ S S + +PQ QP A+T T
Sbjct: 540 QLMRKASPMSYFRKLPQPPQPSAATTLT 567
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 205 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 381
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 39 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 97
Query: 382 TIHRI 396
HRI
Sbjct: 98 KKHRI 102
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 286 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 450
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 205 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 381
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 784 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 842
Query: 382 TIHRI 396
HRI
Sbjct: 843 KKHRI 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,190,446
Number of Sequences: 237096
Number of extensions: 2228925
Number of successful extensions: 13773
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 13554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13771
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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