Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D14
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   136   4e-34
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.39 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   6.4  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  136 bits (330), Expect = 4e-34
 Identities = 63/111 (56%), Positives = 78/111 (70%)
 Frame = +2

Query: 281 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXGKHEEXKDEHGYISRQFVRRY 460
           D GS++   KDKFQ+NLDVQ FSPEEISVK  D  ++V GKHEE +D+HGY+SR FVRRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 461 ALPEGAAPXTVESRLSSDGVLTITAPRKVPDAVKGERKVPIAXTGXVRKEI 613
            LP+G     + S LSSDG+LTIT PRK  +    ER +PI  TG   K++
Sbjct: 63  MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQV 113


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = +3

Query: 489 LWNRGCHQTGFSPSPRRGRYPTPSRERERCPSHXPVPFARRSXTXAREP 635
           LW + C     SP   R    +P        S  P P   RS T A++P
Sbjct: 341 LWMKNCKSCSISPVSDRSESVSPVPSLPVRSSPEPSPVLLRSPTPAKKP 389


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 222 QATAASMSFGVSANPKS*STRRLGQWL*RTRG 127
           ++ A   S G  A PK+   + +G W   TRG
Sbjct: 139 RSMAGFRSLGSGAPPKAQGGKHVGNWEQHTRG 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,790
Number of Sequences: 2352
Number of extensions: 12831
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)