Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D11
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    28   0.077
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.8  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   5.1  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   5.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.1  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 27.9 bits (59), Expect = 0.077
 Identities = 14/78 (17%), Positives = 33/78 (42%)
 Frame = +3

Query: 354 ICWGISFSNDFPGANKLYAATTCSPXHGYSIRQPARGSRQGGCATRIAQVCASLEAAVLF 533
           + WG+    +F  + ++      +  +  S+ +PA G+  G   T I  +  S+  +V  
Sbjct: 252 LVWGVKDQAEFTLSGQVMKYAALATENFSSLLEPAVGTMTGAGGTAIVSISTSVSTSVYL 311

Query: 534 CGRYKICYKETNAHSLPL 587
              +   + E +   +P+
Sbjct: 312 AIVFNGLFTEEDVADVPI 329


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 461 RLKARRLCNENCTSLCQSRGC 523
           ++ A+  CNE+  S C++  C
Sbjct: 483 QIDAKMFCNESSVSNCENEYC 503


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 423 YRLLQHRAYLRRGSHWRRKSPSKSKI 346
           +R+  H     +GSHW  +  S S++
Sbjct: 99  HRIYMHPESPSKGSHWMNQDISFSRV 124


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 388 GKSLEKEIPQQIQN 347
           G+ L+K+IP+ +QN
Sbjct: 57  GEELKKDIPEALQN 70


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 388 GKSLEKEIPQQIQN 347
           G+ L+K+IP+ +QN
Sbjct: 57  GEELKKDIPEALQN 70


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 203 LPWVLQHLTLHLVP 244
           LP+ + H+ +H+VP
Sbjct: 54  LPFAIYHIFMHIVP 67


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 388 GKSLEKEIPQQIQN 347
           G+ L+K+IP  +QN
Sbjct: 56  GEELKKDIPDALQN 69


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -2

Query: 316 WHLIGSFPG 290
           WH++G+F G
Sbjct: 254 WHIVGTFSG 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,172
Number of Sequences: 336
Number of extensions: 3268
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)