Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_D11
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC091477-1|AAH91477.2| 314|Homo sapiens Yip1 interacting factor... 88 3e-17
BC014974-1|AAH14974.1| 294|Homo sapiens YIF1B protein protein. 88 3e-17
BC007644-1|AAH07644.1| 310|Homo sapiens YIF1B protein protein. 88 3e-17
AY358965-1|AAQ89324.1| 283|Homo sapiens ADPH3073 protein. 88 3e-17
AF258578-1|AAG23781.1| 283|Homo sapiens PP4519 protein. 88 3e-17
CR456710-1|CAG32991.1| 293|Homo sapiens YIF1 protein. 84 5e-16
BC001299-1|AAH01299.1| 293|Homo sapiens Yip1 interacting factor... 84 5e-16
AF004876-1|AAD01206.1| 293|Homo sapiens 54TMp protein. 84 5e-16
S83365-1|AAB50850.1| 123|Homo sapiens putative Rab5-interacting... 71 4e-12
X96586-1|CAA65405.1| 917|Homo sapiens FAN protein protein. 31 3.6
BC041124-1|AAH41124.1| 917|Homo sapiens neutral sphingomyelinas... 31 3.6
>BC091477-1|AAH91477.2| 314|Homo sapiens Yip1 interacting factor
homolog B (S. cerevisiae) protein.
Length = 314
Score = 87.8 bits (208), Expect = 3e-17
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +1
Query: 361 GGFPSPMTSPAQISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAV 540
GG P SP ++ L PV +MA+ YG+ LAAQGKE V + + +F+P+++L+YYFAV
Sbjct: 57 GGLSYPAASPTPHAAFLADPV-SNMAMAYGSSLAAQGKELVDKNIDRFIPITKLKYYFAV 115
Query: 541 DTRYVIRKLMLIVFPYTH 594
DT YV RKL L+ FPY H
Sbjct: 116 DTMYVGRKLGLLFFPYLH 133
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 584 PILIXEWMVKYDQDTPVQPRYDI 652
P L +W V+Y QDTPV PR+D+
Sbjct: 130 PYLHQDWEVQYQQDTPVAPRFDV 152
>BC014974-1|AAH14974.1| 294|Homo sapiens YIF1B protein protein.
Length = 294
Score = 87.8 bits (208), Expect = 3e-17
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +1
Query: 361 GGFPSPMTSPAQISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAV 540
GG P SP ++ L PV +MA+ YG+ LAAQGKE V + + +F+P+++L+YYFAV
Sbjct: 54 GGLSYPAASPTPHAAFLADPV-SNMAMAYGSSLAAQGKELVDKNIDRFIPITKLKYYFAV 112
Query: 541 DTRYVIRKLMLIVFPYTH 594
DT YV RKL L+ FPY H
Sbjct: 113 DTMYVGRKLGLLFFPYLH 130
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 584 PILIXEWMVKYDQDTPVQPRYDI 652
P L +W V+Y QDTPV PR+D+
Sbjct: 127 PYLHQDWEVQYQQDTPVAPRFDV 149
>BC007644-1|AAH07644.1| 310|Homo sapiens YIF1B protein protein.
Length = 310
Score = 87.8 bits (208), Expect = 3e-17
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +1
Query: 361 GGFPSPMTSPAQISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAV 540
GG P SP ++ L PV +MA+ YG+ LAAQGKE V + + +F+P+++L+YYFAV
Sbjct: 53 GGLSYPAASPTPHAAFLADPV-SNMAMAYGSSLAAQGKELVDKNIDRFIPITKLKYYFAV 111
Query: 541 DTRYVIRKLMLIVFPYTH 594
DT YV RKL L+ FPY H
Sbjct: 112 DTMYVGRKLGLLFFPYLH 129
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 584 PILIXEWMVKYDQDTPVQPRYDI 652
P L +W V+Y QDTPV PR+D+
Sbjct: 126 PYLHQDWEVQYQQDTPVAPRFDV 148
>AY358965-1|AAQ89324.1| 283|Homo sapiens ADPH3073 protein.
Length = 283
Score = 87.8 bits (208), Expect = 3e-17
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +1
Query: 361 GGFPSPMTSPAQISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAV 540
GG P SP ++ L PV +MA+ YG+ LAAQGKE V + + +F+P+++L+YYFAV
Sbjct: 26 GGLSYPAASPTPHAAFLADPV-SNMAMAYGSSLAAQGKELVDKNIDRFIPITKLKYYFAV 84
Query: 541 DTRYVIRKLMLIVFPYTH 594
DT YV RKL L+ FPY H
Sbjct: 85 DTMYVGRKLGLLFFPYLH 102
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 584 PILIXEWMVKYDQDTPVQPRYDI 652
P L +W V+Y QDTPV PR+D+
Sbjct: 99 PYLHQDWEVQYQQDTPVAPRFDV 121
>AF258578-1|AAG23781.1| 283|Homo sapiens PP4519 protein.
Length = 283
Score = 87.8 bits (208), Expect = 3e-17
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +1
Query: 361 GGFPSPMTSPAQISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAV 540
GG P SP ++ L PV +MA+ YG+ LAAQGKE V + + +F+P+++L+YYFAV
Sbjct: 26 GGLSYPAASPTPHAAFLADPV-SNMAMAYGSSLAAQGKELVDKNIDRFIPITKLKYYFAV 84
Query: 541 DTRYVIRKLMLIVFPYTH 594
DT YV RKL L+ FPY H
Sbjct: 85 DTMYVGRKLGLLFFPYLH 102
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 584 PILIXEWMVKYDQDTPVQPRYDI 652
P L +W V+Y QDTPV PR+D+
Sbjct: 99 PYLHQDWEVQYQQDTPVAPRFDV 121
>CR456710-1|CAG32991.1| 293|Homo sapiens YIF1 protein.
Length = 293
Score = 83.8 bits (198), Expect = 5e-16
Identities = 38/79 (48%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +1
Query: 361 GGFPSPMTSPA-QISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFA 537
GG+P+ A ++ +L P+ ++A+ YG+ +A+ GK+ V +ELH+FV VS+L+Y+FA
Sbjct: 38 GGYPATGADVAFSVNHLLGDPMA-NVAMAYGSSIASHGKDMVHKELHRFVSVSKLKYFFA 96
Query: 538 VDTRYVIRKLMLIVFPYTH 594
VDT YV +KL L+VFPYTH
Sbjct: 97 VDTAYVAKKLGLLVFPYTH 115
>BC001299-1|AAH01299.1| 293|Homo sapiens Yip1 interacting factor
homolog A (S. cerevisiae) protein.
Length = 293
Score = 83.8 bits (198), Expect = 5e-16
Identities = 38/79 (48%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +1
Query: 361 GGFPSPMTSPA-QISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFA 537
GG+P+ A ++ +L P+ ++A+ YG+ +A+ GK+ V +ELH+FV VS+L+Y+FA
Sbjct: 38 GGYPATGADVAFSVNHLLGDPMA-NVAMAYGSSIASHGKDMVHKELHRFVSVSKLKYFFA 96
Query: 538 VDTRYVIRKLMLIVFPYTH 594
VDT YV +KL L+VFPYTH
Sbjct: 97 VDTAYVAKKLGLLVFPYTH 115
>AF004876-1|AAD01206.1| 293|Homo sapiens 54TMp protein.
Length = 293
Score = 83.8 bits (198), Expect = 5e-16
Identities = 38/79 (48%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Frame = +1
Query: 361 GGFPSPMTSPA-QISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFA 537
GG+P+ A ++ +L P+ ++A+ YG+ +A+ GK+ V +ELH+FV VS+L+Y+FA
Sbjct: 38 GGYPATGADVAFSVNHLLGDPMA-NVAMAYGSSIASHGKDMVHKELHRFVSVSKLKYFFA 96
Query: 538 VDTRYVIRKLMLIVFPYTH 594
VDT YV +KL L+VFPYTH
Sbjct: 97 VDTAYVAKKLGLLVFPYTH 115
>S83365-1|AAB50850.1| 123|Homo sapiens putative Rab5-interacting
protein protein.
Length = 123
Score = 70.9 bits (166), Expect = 4e-12
Identities = 35/80 (43%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = +1
Query: 361 GGFPSPMTSPA-QISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFA 537
GG+P+ A ++ +L P+ ++A+ YG+ +A+ GK+ V +ELH+FV VS+L+Y+FA
Sbjct: 29 GGYPATGADVAFSVNHLLGDPMA-NVAMAYGSSIASHGKDMVHKELHRFVSVSKLKYFFA 87
Query: 538 VDTRYVIRKLML-IVFPYTH 594
VDT YV ++ VFPYTH
Sbjct: 88 VDTAYVGQEARAGWVFPYTH 107
>X96586-1|CAA65405.1| 917|Homo sapiens FAN protein protein.
Length = 917
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 465 SRELVAVLNSHVXDYRLLQHRA--YLRRGSHWRRKSPSKSKICRSMCI 328
S+E ++L ++ +Y QHRA L +GSH RK KIC I
Sbjct: 17 SKERFSLLLLNLEEYYFEQHRANHILHKGSHHERKIRGSLKICSKSVI 64
>BC041124-1|AAH41124.1| 917|Homo sapiens neutral sphingomyelinase
(N-SMase) activation associated factor protein.
Length = 917
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 465 SRELVAVLNSHVXDYRLLQHRA--YLRRGSHWRRKSPSKSKICRSMCI 328
S+E ++L ++ +Y QHRA L +GSH RK KIC I
Sbjct: 17 SKERFSLLLLNLEEYYFEQHRANHILHKGSHHERKIRGSLKICSKSVI 64
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,646,674
Number of Sequences: 237096
Number of extensions: 2138206
Number of successful extensions: 4424
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4424
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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