Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D11
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70781-7|CAJ55254.1|  380|Caenorhabditis elegans Hypothetical pr...    48   4e-06
Z70781-6|CAA94831.2|  349|Caenorhabditis elegans Hypothetical pr...    48   4e-06
Z98866-25|CAL22710.1|  325|Caenorhabditis elegans Hypothetical p...    28   6.7  
Z50742-1|CAA90614.2|  605|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>Z70781-7|CAJ55254.1|  380|Caenorhabditis elegans Hypothetical
           protein F57A8.2b protein.
          Length = 380

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 26/67 (38%), Positives = 40/67 (59%)
 Frame = +1

Query: 394 QISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAVDTRYVIRKLML 573
           Q   ++  P++ + A Q+G Q A Q KE    +L K++    L+YYFAVD  YV +KL +
Sbjct: 90  QPQQLMSDPML-NAAKQFGGQFAEQQKE----KLTKYLGTFNLKYYFAVDNAYVGKKLGI 144

Query: 574 IVFPYTH 594
           + FP+ H
Sbjct: 145 LFFPFFH 151


>Z70781-6|CAA94831.2|  349|Caenorhabditis elegans Hypothetical
           protein F57A8.2a protein.
          Length = 349

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 26/67 (38%), Positives = 40/67 (59%)
 Frame = +1

Query: 394 QISSMLQQPVVXDMAIQYGNQLAAQGKEAVQRELHKFVPVSRLRYYFAVDTRYVIRKLML 573
           Q   ++  P++ + A Q+G Q A Q KE    +L K++    L+YYFAVD  YV +KL +
Sbjct: 90  QPQQLMSDPML-NAAKQFGGQFAEQQKE----KLTKYLGTFNLKYYFAVDNAYVGKKLGI 144

Query: 574 IVFPYTH 594
           + FP+ H
Sbjct: 145 LFFPFFH 151


>Z98866-25|CAL22710.1|  325|Caenorhabditis elegans Hypothetical
           protein Y49E10.28 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 417 LLQHRAYLRRGSHWRRKSPSKSKICR 340
           LL     L +  HW R++ S+S+ICR
Sbjct: 230 LLPQLDELHKTDHWNRENASRSEICR 255


>Z50742-1|CAA90614.2|  605|Caenorhabditis elegans Hypothetical
           protein K09A11.1 protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 472 KEAVQRELHKFVPVSRLRYYFAVDTRY 552
           KE ++RELHK+     L++   +D RY
Sbjct: 406 KEHMERELHKYTSCQYLKFSTLLDPRY 432


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,210,391
Number of Sequences: 27780
Number of extensions: 315961
Number of successful extensions: 722
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)