Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D10
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...   104   6e-23
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   3.8  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   3.8  
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score =  104 bits (249), Expect = 6e-23
 Identities = 57/140 (40%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
 Frame = +2

Query: 203 DIQIEGFNPSAEEA--DEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLV 376
           +I + G NPSAEE   D+G+D  VE G+DIVLNH+LVE   + D   +  Y+K +MK ++
Sbjct: 41  EIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVI 100

Query: 377 XKLEEKAPDQ--VEVFKTNMNKVMKDILG--RFKELQFFTGESM---DCDGMVAMMEYRD 535
             +E+   D+  V+ FK  +   +  +L   RFK L FF GE       +G VA++EYRD
Sbjct: 101 DHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRD 160

Query: 536 FDGTQIPIMMFFKHGLXXEK 595
            DGT++P +M  K  +  EK
Sbjct: 161 VDGTEVPTLMLVKEAIIEEK 180



 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +1

Query: 82  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQG 201
           M IYKDI T DE+ SD++ MKLVD+++YE  G+ V R +G
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEG 40


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 311   TYAFG--DKKSYTLYLKDYMKKLVXKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 475
             T+ FG  D++ Y++ +KD  KKL  +  E+      +  TN  K    + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 311   TYAFG--DKKSYTLYLKDYMKKLVXKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 475
             T+ FG  D++ Y++ +KD  KKL  +  E+      +  TN  K    + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 221  FNPSAEEADEGTDSAVESG-VDIVLNH 298
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 221  FNPSAEEADEGTDSAVESG-VDIVLNH 298
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical
           protein ZK945.3 protein.
          Length = 766

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +2

Query: 326 DKKSYTLYLKDYMKKLVXKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 469
           +KK+  L L    +K + K+EEKA       K+ ++K +KD L R K+
Sbjct: 22  EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLKK 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,279,486
Number of Sequences: 27780
Number of extensions: 254608
Number of successful extensions: 761
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)