Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_D08
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100934-1|AAI00935.1| 288|Homo sapiens apolipoprotein A-I bind... 157 2e-38
BC100933-1|AAI00934.1| 288|Homo sapiens apolipoprotein A-I bind... 157 2e-38
BC100931-1|AAI00932.1| 288|Homo sapiens apolipoprotein A-I bind... 157 2e-38
AL365181-7|CAI13051.1| 288|Homo sapiens apolipoprotein A-I bind... 157 2e-38
AL365181-5|CAI13049.1| 245|Homo sapiens apolipoprotein A-I bind... 157 2e-38
AJ315849-1|CAC86580.1| 288|Homo sapiens apoA-I binding protein ... 157 2e-38
BC056917-1|AAH56917.1| 260|Homo sapiens APOA1BP protein protein. 148 2e-35
AL365181-6|CAI13050.1| 260|Homo sapiens apolipoprotein A-I bind... 148 2e-35
BC020948-1|AAH20948.1| 254|Homo sapiens FLJ44968 protein protein. 97 4e-20
BC100932-1|AAI00933.1| 185|Homo sapiens APOA1BP protein protein. 90 6e-18
BC032112-1|AAH32112.1| 552|Homo sapiens integrin alpha FG-GAP r... 31 3.6
BC013047-1|AAH13047.1| 552|Homo sapiens integrin alpha FG-GAP r... 31 3.6
BC010521-1|AAH10521.1| 526|Homo sapiens ITFG3 protein protein. 31 3.6
AK057165-1|BAB71374.1| 540|Homo sapiens protein ( Homo sapiens ... 31 3.6
AE006462-12|AAK61220.1| 636|Homo sapiens unknown function protein. 31 3.6
>BC100934-1|AAI00935.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 157 bits (382), Expect = 2e-38
Identities = 74/148 (50%), Positives = 106/148 (71%), Gaps = 5/148 (3%)
Frame = +2
Query: 221 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 400
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 401 STHS----SALIVCGPXNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRF 568
++ S + L++CGP NNGGDGLV ARH++LFGY +++YPKR KPL+ L+ QC +
Sbjct: 102 TSMSRSPPTVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQKM 161
Query: 569 NVNIIDKLP-HTKDLNNEYKVLVDALFG 649
++ + ++P ++ Y+++VDA+FG
Sbjct: 162 DIPFLGEMPAEPMTIDELYELVVDAIFG 189
>BC100933-1|AAI00934.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 157 bits (382), Expect = 2e-38
Identities = 74/148 (50%), Positives = 106/148 (71%), Gaps = 5/148 (3%)
Frame = +2
Query: 221 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 400
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 401 STHS----SALIVCGPXNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRF 568
++ S + L++CGP NNGGDGLV ARH++LFGY +++YPKR KPL+ L+ QC +
Sbjct: 102 TSMSRSPPTVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQKM 161
Query: 569 NVNIIDKLP-HTKDLNNEYKVLVDALFG 649
++ + ++P ++ Y+++VDA+FG
Sbjct: 162 DIPFLGEMPAEPMTIDELYELVVDAIFG 189
>BC100931-1|AAI00932.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 157 bits (382), Expect = 2e-38
Identities = 74/148 (50%), Positives = 106/148 (71%), Gaps = 5/148 (3%)
Frame = +2
Query: 221 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 400
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 401 STHS----SALIVCGPXNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRF 568
++ S + L++CGP NNGGDGLV ARH++LFGY +++YPKR KPL+ L+ QC +
Sbjct: 102 TSMSRSPPTVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQKM 161
Query: 569 NVNIIDKLP-HTKDLNNEYKVLVDALFG 649
++ + ++P ++ Y+++VDA+FG
Sbjct: 162 DIPFLGEMPAEPMTIDELYELVVDAIFG 189
>AL365181-7|CAI13051.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 157 bits (382), Expect = 2e-38
Identities = 74/148 (50%), Positives = 106/148 (71%), Gaps = 5/148 (3%)
Frame = +2
Query: 221 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 400
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 401 STHS----SALIVCGPXNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRF 568
++ S + L++CGP NNGGDGLV ARH++LFGY +++YPKR KPL+ L+ QC +
Sbjct: 102 TSMSRSPPTVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQKM 161
Query: 569 NVNIIDKLP-HTKDLNNEYKVLVDALFG 649
++ + ++P ++ Y+++VDA+FG
Sbjct: 162 DIPFLGEMPAEPMTIDELYELVVDAIFG 189
>AL365181-5|CAI13049.1| 245|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 245
Score = 157 bits (382), Expect = 2e-38
Identities = 74/148 (50%), Positives = 106/148 (71%), Gaps = 5/148 (3%)
Frame = +2
Query: 221 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 400
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 401 STHS----SALIVCGPXNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRF 568
++ S + L++CGP NNGGDGLV ARH++LFGY +++YPKR KPL+ L+ QC +
Sbjct: 102 TSMSRSPPTVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQKM 161
Query: 569 NVNIIDKLP-HTKDLNNEYKVLVDALFG 649
++ + ++P ++ Y+++VDA+FG
Sbjct: 162 DIPFLGEMPAEPMTIDELYELVVDAIFG 189
>AJ315849-1|CAC86580.1| 288|Homo sapiens apoA-I binding protein
protein.
Length = 288
Score = 157 bits (382), Expect = 2e-38
Identities = 74/148 (50%), Positives = 106/148 (71%), Gaps = 5/148 (3%)
Frame = +2
Query: 221 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 400
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 401 STHS----SALIVCGPXNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRF 568
++ S + L++CGP NNGGDGLV ARH++LFGY +++YPKR KPL+ L+ QC +
Sbjct: 102 TSMSRSPPTVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQKM 161
Query: 569 NVNIIDKLP-HTKDLNNEYKVLVDALFG 649
++ + ++P ++ Y+++VDA+FG
Sbjct: 162 DIPFLGEMPAEPMTIDELYELVVDAIFG 189
>BC056917-1|AAH56917.1| 260|Homo sapiens APOA1BP protein protein.
Length = 260
Score = 148 bits (358), Expect = 2e-35
Identities = 68/129 (52%), Positives = 94/129 (72%), Gaps = 4/129 (3%)
Frame = +2
Query: 221 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 400
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 401 STHS----SALIVCGPXNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRF 568
++ S + L++CGP NNGGDGLV ARH++LFGY +++YPKR KPL+ L+ QC +
Sbjct: 102 TSMSRSPPTVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQKM 161
Query: 569 NVNIIDKLP 595
++ + ++P
Sbjct: 162 DIPFLGEMP 170
>AL365181-6|CAI13050.1| 260|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 260
Score = 148 bits (358), Expect = 2e-35
Identities = 68/129 (52%), Positives = 94/129 (72%), Gaps = 4/129 (3%)
Frame = +2
Query: 221 NIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPP 400
N G S +TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP
Sbjct: 42 NSGGRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPP 101
Query: 401 STHS----SALIVCGPXNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRF 568
++ S + L++CGP NNGGDGLV ARH++LFGY +++YPKR KPL+ L+ QC +
Sbjct: 102 TSMSRSPPTVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQKM 161
Query: 569 NVNIIDKLP 595
++ + ++P
Sbjct: 162 DIPFLGEMP 170
>BC020948-1|AAH20948.1| 254|Homo sapiens FLJ44968 protein protein.
Length = 254
Score = 97.5 bits (232), Expect = 4e-20
Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Frame = +2
Query: 284 SEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHS----SALIVCGPXNNGG 451
+EAAAL+++L +Y+F QL+EL G + A A+ K FP S + L+VCGP NG
Sbjct: 79 AEAAALERELLEDYRFGRQQLVELCGHASAVAVTKAFPLPALSRKQRTVLVVCGPEQNGA 138
Query: 452 DGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRFNVNIIDKLPHTKDLNNE-YKV 628
GLV ARH+++F Y ++ YP R+ L+ +L QC + ++ + LP L NE Y +
Sbjct: 139 VGLVCARHLRVFEYEPTIFYPTRSLDLLHRDLTTQCEKMDIPFLSYLPTEVQLINEAYGL 198
Query: 629 LVDALFG 649
+VDA+ G
Sbjct: 199 VVDAVLG 205
>BC100932-1|AAI00933.1| 185|Homo sapiens APOA1BP protein protein.
Length = 185
Score = 90.2 bits (214), Expect = 6e-18
Identities = 36/80 (45%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +2
Query: 413 SALIVCGPXNNGGDGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRFNVNIIDKL 592
+ L++CGP NNGGDGLV ARH++LFGY +++YPKR KPL+ L+ QC + ++ + ++
Sbjct: 7 TVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQKMDIPFLGEM 66
Query: 593 P-HTKDLNNEYKVLVDALFG 649
P ++ Y+++VDA+FG
Sbjct: 67 PAEPMTIDELYELVVDAIFG 86
>BC032112-1|AAH32112.1| 552|Homo sapiens integrin alpha FG-GAP
repeat containing 3 protein.
Length = 552
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 344 LMELAGLS--VASAIAKVFPPSTHSSALIVCGPXNNGGDGLVA 466
L+ELA +S + + A +F PS H++ +++ GP ++ GLV+
Sbjct: 468 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 510
>BC013047-1|AAH13047.1| 552|Homo sapiens integrin alpha FG-GAP
repeat containing 3 protein.
Length = 552
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 344 LMELAGLS--VASAIAKVFPPSTHSSALIVCGPXNNGGDGLVA 466
L+ELA +S + + A +F PS H++ +++ GP ++ GLV+
Sbjct: 468 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 510
>BC010521-1|AAH10521.1| 526|Homo sapiens ITFG3 protein protein.
Length = 526
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 344 LMELAGLS--VASAIAKVFPPSTHSSALIVCGPXNNGGDGLVA 466
L+ELA +S + + A +F PS H++ +++ GP ++ GLV+
Sbjct: 442 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 484
>AK057165-1|BAB71374.1| 540|Homo sapiens protein ( Homo sapiens
cDNA FLJ32603 fis, clone STOMA1000117. ).
Length = 540
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 344 LMELAGLS--VASAIAKVFPPSTHSSALIVCGPXNNGGDGLVA 466
L+ELA +S + + A +F PS H++ +++ GP ++ GLV+
Sbjct: 468 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 510
>AE006462-12|AAK61220.1| 636|Homo sapiens unknown function protein.
Length = 636
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 344 LMELAGLS--VASAIAKVFPPSTHSSALIVCGPXNNGGDGLVA 466
L+ELA +S + + A +F PS H++ +++ GP ++ GLV+
Sbjct: 525 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 567
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,690,429
Number of Sequences: 237096
Number of extensions: 1943905
Number of successful extensions: 3293
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3284
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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