Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D08
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical ...   112   2e-25
U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AC024830-7|AAV34782.1|  580|Caenorhabditis elegans Hypothetical ...    28   5.0  
AC024830-6|AAF59601.3|  603|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>AL034393-3|CAA22319.1|  348|Caenorhabditis elegans Hypothetical
           protein Y18D10A.3 protein.
          Length = 348

 Score =  112 bits (270), Expect = 2e-25
 Identities = 57/126 (45%), Positives = 80/126 (63%)
 Frame = +2

Query: 272 YLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHSSALIVCGPXNNGG 451
           ++ Q  AA +D+ LFT+Y F V+QLMELAGL+ A AIA  +P S   +  ++CGP NNGG
Sbjct: 125 FIGQKLAAQIDEQLFTKYGFKVEQLMELAGLAAAQAIAAHYPKS---NVAVLCGPGNNGG 181

Query: 452 DGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRFNVNIIDKLPHTKDLNNEYKVL 631
           DG V ARH+Q FG+  S+ YPK +   L ++L+ QC   ++ I   LP        + ++
Sbjct: 182 DGFVCARHLQQFGFTPSIVYPKESRNELMKSLVVQCETSSIPITATLPTNL---QAFPLI 238

Query: 632 VDALFG 649
           VDALFG
Sbjct: 239 VDALFG 244


>U28928-9|AAN63431.1|  471|Caenorhabditis elegans Hypothetical
           protein C44B7.10 protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +2

Query: 488 GYNVSVHYPKRTPKPLYENLLEQCIRFNVNIIDKLPH 598
           G NV VH    TP PL ++L E  +  N+N I KL H
Sbjct: 53  GDNVFVHGIAATPTPLLQSLSEHAVANNLNKI-KLHH 88


>AC024830-7|AAV34782.1|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.8b protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
 Frame = +2

Query: 212 KLYNIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKV 391
           +LY  G    ++ + N +  YLN  +    D  L    KF    ++ +  L+  SA  + 
Sbjct: 170 RLYGTGADDVTLRKINILDSYLNTPDKGNSDTPLHFASKFGKIGVVRV--LTENSATDRT 227

Query: 392 FPPSTHSSALIVCGPXNNGGDGLVAAR--HMQLFGYNVSVH 508
               +  SAL   G    G D  +  R  H+ + G+ V +H
Sbjct: 228 LLNKSGKSALDCAGERYTGEDKDMVQRDIHLAIEGFYVFLH 268


>AC024830-6|AAF59601.3|  603|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.8a protein.
          Length = 603

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
 Frame = +2

Query: 212 KLYNIGTMTSSVNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKV 391
           +LY  G    ++ + N +  YLN  +    D  L    KF    ++ +  L+  SA  + 
Sbjct: 193 RLYGTGADDVTLRKINILDSYLNTPDKGNSDTPLHFASKFGKIGVVRV--LTENSATDRT 250

Query: 392 FPPSTHSSALIVCGPXNNGGDGLVAAR--HMQLFGYNVSVH 508
               +  SAL   G    G D  +  R  H+ + G+ V +H
Sbjct: 251 LLNKSGKSALDCAGERYTGEDKDMVQRDIHLAIEGFYVFLH 291


>Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical
           protein F16A11.1 protein.
          Length = 673

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
 Frame = +2

Query: 332 SVDQLMELAGLSVASAIAKVFPPSTHSSALIVCG--PXNNGGDGLVAARHMQLFGYNVSV 505
           SV  L+   GLS     +K  PPS H +  IV G       G   V   + ++ GY + +
Sbjct: 186 SVQTLLLSLGLSSEFVDSKHLPPSWHKNMCIVLGSLAEKMAGSAAVTMFNDKIKGYLMKI 245

Query: 506 ------HYPKRTPKPLYENLLEQCIR-FNVNIIDKLPHTKD 607
                 ++P    K L E     C+R F +  ++K   T++
Sbjct: 246 ICYGLTYFPPNYGKTLKEK-NTHCVRMFALLALEKFAQTRE 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,974,029
Number of Sequences: 27780
Number of extensions: 320068
Number of successful extensions: 724
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)