Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D05
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118945-1|AAM50805.1|  166|Drosophila melanogaster LD31024p pro...   219   4e-57
AE014296-3728|AAF51870.1|  166|Drosophila melanogaster CG11137-P...   219   4e-57
AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p pro...    29   4.2  
AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-P...    29   4.2  

>AY118945-1|AAM50805.1|  166|Drosophila melanogaster LD31024p
           protein.
          Length = 166

 Score =  219 bits (534), Expect = 4e-57
 Identities = 103/162 (63%), Positives = 127/162 (78%)
 Frame = +2

Query: 170 MSQLKSNKKLKWALDFNQKNKQLSTELPSPPGYSQSSNANYAESSKDSDSNLLLIKKLWD 349
           MS  ++ KKLKWALDFN      + ++PSP GY+ S+  N +E  +D     L+IKK WD
Sbjct: 1   MSAKQNPKKLKWALDFNGSK---NADIPSPLGYNPSALVNQSEVVRDQR---LVIKKSWD 54

Query: 350 VALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKALFATQSTFKMVEGTQAIGQ 529
           +ALGPLK +PMNLFIMYM+GNSISIFPIMMVGM+++RP+KA+F TQ T KM EG Q  GQ
Sbjct: 55  LALGPLKNIPMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQVTSKMAEGAQGTGQ 114

Query: 530 KIVYCIGNIVNILLALYKCQSMGLLPTHSSDWLAFEEPQTRL 655
           +IVY +GN+ N+ LALYKCQSMGLLPTH+SDWLAF +PQTRL
Sbjct: 115 RIVYFLGNLANVALALYKCQSMGLLPTHASDWLAFVQPQTRL 156


>AE014296-3728|AAF51870.1|  166|Drosophila melanogaster CG11137-PA
           protein.
          Length = 166

 Score =  219 bits (534), Expect = 4e-57
 Identities = 103/162 (63%), Positives = 127/162 (78%)
 Frame = +2

Query: 170 MSQLKSNKKLKWALDFNQKNKQLSTELPSPPGYSQSSNANYAESSKDSDSNLLLIKKLWD 349
           MS  ++ KKLKWALDFN      + ++PSP GY+ S+  N +E  +D     L+IKK WD
Sbjct: 1   MSAKQNPKKLKWALDFNGSK---NADIPSPLGYNPSALVNQSEVVRDQR---LVIKKSWD 54

Query: 350 VALGPLKQVPMNLFIMYMAGNSISIFPIMMVGMLIVRPVKALFATQSTFKMVEGTQAIGQ 529
           +ALGPLK +PMNLFIMYM+GNSISIFPIMMVGM+++RP+KA+F TQ T KM EG Q  GQ
Sbjct: 55  LALGPLKNIPMNLFIMYMSGNSISIFPIMMVGMMLIRPIKAIFTTQVTSKMAEGAQGTGQ 114

Query: 530 KIVYCIGNIVNILLALYKCQSMGLLPTHSSDWLAFEEPQTRL 655
           +IVY +GN+ N+ LALYKCQSMGLLPTH+SDWLAF +PQTRL
Sbjct: 115 RIVYFLGNLANVALALYKCQSMGLLPTHASDWLAFVQPQTRL 156


>AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p
           protein.
          Length = 1478

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 505 NHFESTLCSKQRLHRPHY*HANHHYWKYRDRVTSHVHNKKIHG 377
           NH +      Q+ H  H  H NHH  + + +   H+H  ++HG
Sbjct: 25  NHQQHHAGHHQQQHMHHQHHQNHHQ-QLQQQQLPHLHTLQLHG 66


>AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-PA
           protein.
          Length = 1843

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 505 NHFESTLCSKQRLHRPHY*HANHHYWKYRDRVTSHVHNKKIHG 377
           NH +      Q+ H  H  H NHH  + + +   H+H  ++HG
Sbjct: 390 NHQQHHAGHHQQQHMHHQHHQNHHQ-QLQQQQLPHLHTLQLHG 431


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,205,559
Number of Sequences: 53049
Number of extensions: 564362
Number of successful extensions: 1566
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)