Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_D04
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   5.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.9  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 254 LELRYQDRGDTKDETELRH 198
           LE  Y+D  +  DETEL H
Sbjct: 380 LEKLYKDLLELSDETELFH 398



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 505 NDVLIPIEIPWRNLAAKMKYVLEAL 431
           N V IP+ I W +  +K  Y+ + L
Sbjct: 445 NGVKIPLVIIWSSNLSKRPYIYKYL 469


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 455 DEVCVGGACD*QPADDYGQNTDDIGDFSSIFAHD 354
           DE      C+ +PAD+Y + T + GD   +   D
Sbjct: 26  DEATADELCENRPADEYFRLTTE-GDCRDVVRCD 58


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 416 LAVNHKRLQHILHLGCKISPRDLYGNEHIIGTDLDWRI 529
           L V+  R   +    C+++  DL      + TD+ WRI
Sbjct: 71  LLVSKSRKSRMNFFICQLAIADLAVGLISVSTDIAWRI 108


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 156 FVKQCFVTSGVAISMAQFGLVFGITAILI 242
           F K C++   ++ S+  F  VFG++ +++
Sbjct: 223 FSKICYLHQHLSKSVKLFNEVFGVSLLVL 251


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 156 FVKQCFVTSGVAISMAQFGLVFGITAILI 242
           F K C++   ++ S+  F  VFG++ +++
Sbjct: 241 FSKICYLHQHLSKSVKLFNEVFGVSLLVL 269


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 455 DEVCVGGACD*QPADDYGQNTDDIGD 378
           DE      C+ +PAD+Y + T + GD
Sbjct: 26  DEATADELCENRPADEYFRLTTE-GD 50


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 302 SCYTWFRAVIW 334
           SC+  F+AV+W
Sbjct: 392 SCWAQFKAVLW 402


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 302 SCYTWFRAVIW 334
           SC+  F+AV+W
Sbjct: 392 SCWAQFKAVLW 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,130
Number of Sequences: 336
Number of extensions: 3663
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)