Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_D04
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 45 5e-05
U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified vi... 44 1e-04
Z70037-1|CAA93878.1| 493|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 39 0.004
AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.005
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 38 0.005
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 38 0.006
AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical ... 37 0.011
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 37 0.011
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical pr... 35 0.044
AF125971-4|AAD14766.1| 381|Caenorhabditis elegans Hypothetical ... 35 0.058
Z82278-4|CAB05257.2| 487|Caenorhabditis elegans Hypothetical pr... 33 0.23
U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical p... 32 0.31
U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical p... 32 0.31
AF067222-2|AAC17018.2| 458|Caenorhabditis elegans Hypothetical ... 32 0.31
U64853-5|AAB04978.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.71
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 30 1.6
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81557-7|CAB04538.1| 421|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 29 2.2
U64844-12|AAB18312.4| 417|Caenorhabditis elegans Hypothetical p... 29 2.2
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm... 29 2.9
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm... 29 2.9
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF125952-2|AAD14700.1| 478|Caenorhabditis elegans Hypothetical ... 29 2.9
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ... 29 2.9
AC006722-8|AAK68418.2| 478|Caenorhabditis elegans Hypothetical ... 29 2.9
Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical p... 29 3.8
Z92781-1|CAB07180.2| 250|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z50016-14|CAI06050.2| 177|Caenorhabditis elegans Hypothetical p... 28 5.0
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 28 5.0
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 28 5.0
Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z36752-5|CAA85328.2| 533|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z19158-3|CAA79572.2| 305|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF099000-1|AAK71876.1| 334|Caenorhabditis elegans Serpentine re... 27 8.8
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +3
Query: 318 FALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMS 497
F +L G+ I +GRK+ + ++ L +++GWL++ + N +R + G G S
Sbjct: 137 FGVLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLIVVQSRNLLHFTISRTIVGFFTGGS 196
Query: 498 TSLGPILIGEYTSPKYR 548
S+ + I E K+R
Sbjct: 197 ISIINVFIMENIPKKHR 213
>U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 7 protein.
Length = 357
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Frame = +3
Query: 318 FALLFGNFTIPTIMGKYGRKVANIISVLPVIVG---WLLITSASNTYFI-LAARFLQGIS 485
+ L G F + ++GRK+ ++ + ++G LLITS + + R + GI
Sbjct: 111 YGLAIGCFVAVLMSHRHGRKLPVVVGTILDVIGVVLTLLITSVPHGVTVATVGRLINGIG 170
Query: 486 MGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSV------GSYVTWQW 635
GM + G +++ E K RG L++L + M L ++ G+ WQW
Sbjct: 171 QGMVQTAGSVMLSELPPLKTRGTVLATLTMWACMGELGGMTISLDEFFGTPELWQW 226
>Z70037-1|CAA93878.1| 493|Caenorhabditis elegans Hypothetical
protein T27D12.1 protein.
Length = 493
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Frame = +3
Query: 285 STESWIA-AIPGFALLFGNFTIPTIMGKYG-RKVANIISVLPVIVGWLL-ITSASNTYFI 455
ST++ +A AI A L GNF I ++G G R V + +L + L+ ++ Y+
Sbjct: 75 STQNSLAMAIVAIAALLGNFPIVQLVGMVGIRTVFAGLGILSAVSTLLIPLSIRMGFYYF 134
Query: 456 LAARFLQGISMGMSTSLGPILIGEYTSPKYRGAFLSSL-CLVMAMATLTVHSVGSYVT-W 629
LA RFLQG + + + +++ K G F+SSL V +T+ + G+ + +
Sbjct: 135 LAVRFLQGFAFAANFPVIGSFCAKWSYFKQNGLFVSSLVAYVQLSPAITMPASGALCSAF 194
Query: 630 QW 635
+W
Sbjct: 195 KW 196
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +3
Query: 300 IAAIPGFALLFGNFTIPTIMG-KYGRKVANIIS-VLPVIVGW--LLITSASNTYFILAAR 467
+++I A+L +FT I+G KYGR+ + +L V L+ S+ ++ R
Sbjct: 63 VSSIAIGAILGASFT--RIIGEKYGRRNGMFFNGILNVFAALFELVAKRFSSPELLIFGR 120
Query: 468 FLQGISMGMSTSLGPILIGEYTSPKYRG 551
F+ GI+MG+S+ L P+ + E T KYRG
Sbjct: 121 FVYGINMGLSSGLVPMYLMEITPYKYRG 148
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Frame = +3
Query: 306 AIPGFALLFGNFTIPTIMGKYG-RKVANIISVLPVIVGWLLITSASNTY-FILAARFLQG 479
A G ++FG+F ++ K+G RKV +I V I+ L + +Y F+L RFL G
Sbjct: 204 AASGLGVIFGSFVTINLIKKFGVRKVFSICMVQSTILILLFLYVQKRSYIFLLLTRFLLG 263
Query: 480 ISM-GMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSY 620
S + +G +LI ++ K + F++S+ + +++ + + Y
Sbjct: 264 FSFSSVFPVMGNLLI-QWGPLKEQLIFITSMFMFLSIGPVVSWPIAHY 310
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Frame = +3
Query: 318 FALLFGNFTIPTIMGKYGRKV----ANIISVLPVIVGWLLITSASNTYFILAARFLQGIS 485
F + G F I + KYG ++ A ++S V G +A + + +A RFLQG++
Sbjct: 72 FGTMVGTFPINILYVKYGARIPFFSAGVLSA--VTTGLTPWAAAQSMWIFVALRFLQGVA 129
Query: 486 MGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYVT----WQWTAF 644
+ I+I ++ F+++L ++A++ + + WQW+ +
Sbjct: 130 YSADFAAIGIVISKWAPLDETAIFIATLTSFTSIASIITNGASGVICDTLGWQWSFY 186
>AL132841-2|CAB60332.1| 469|Caenorhabditis elegans Hypothetical
protein Y15E3A.4 protein.
Length = 469
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +3
Query: 381 ANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSLGPILIGEYTSPKYRGAF- 557
A ++S L V + + + + F++ ARF QG+S G + +++ + S K G F
Sbjct: 104 AGVVSTLSTAV--MPLAAEVHFNFLVVARFFQGVSFGADFAAIGLIVVNWASLKQHGLFI 161
Query: 558 --LSSLCLVMAMATLTVHSVGSYVTWQW 635
LSS + M T+ V TW W
Sbjct: 162 SLLSSFSQISVMFTMPVAGELCESTWGW 189
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +3
Query: 321 ALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTY----FILAARFLQGISM 488
A +FG F + ++GRK +I+ I G LL +A + + R + ++
Sbjct: 102 ATIFGQFLAGWMCSQFGRKHTALIASFLYIPGALLCAAAKWCFPAFELLFVGRIIWSLAN 161
Query: 489 GMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVG 614
G++T + I E P+ RG + MA+ +L +VG
Sbjct: 162 GVNTVNATVWIVECAPPQIRGRMAAMQEFFMALGSLLTQAVG 203
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 294 SWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISV-LPVIVGWLLITSASNTYF--ILAA 464
S++ A+ L G+F+IP I GRK IS+ + V+ G + I S F + +
Sbjct: 64 SFVVAVLFLGALAGSFSIPFIAEGVGRKNGLYISISVGVLAGGMSIASKFIPLFELYIIS 123
Query: 465 RFLQGISMGMSTSLGPILIGEYTSPKYRGA 554
R + G S+ +S L I + E + + RGA
Sbjct: 124 RVVMGWSVSVSLGLSGIFLSEASPKQNRGA 153
>AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical
protein Y51B9A.6 protein.
Length = 516
Score = 37.1 bits (82), Expect = 0.011
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +3
Query: 300 IAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQG 479
IAA+ + L F + +M G ++ + P+++ W S F++ R LQG
Sbjct: 114 IAAVVPMSRLTARFGVHKVMTLSGILGTFLVVITPIVITW------SFPVFVIL-RVLQG 166
Query: 480 ISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAM-ATLTVHSVGSYVT---WQWTAFV 647
I++ + +++ E+ + +G F+S L + M A T+ G+ T W W ++
Sbjct: 167 ITLANLFTTAGVVVNEWAAVNEKGLFISVLSAHVEMGAVFTMPVSGALATSAGWPWVFYL 226
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 37.1 bits (82), Expect = 0.011
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 294 SWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISV-LPVIVGWLLITSASNTYF--ILAA 464
S++ AI L G+F+I I GRK IS+ + V+ G + I S F +A+
Sbjct: 64 SFVVAILFLGALAGSFSIRLIADWIGRKNGLYISIAVGVLAGGMSIASKFIPLFELYIAS 123
Query: 465 RFLQGISMGMSTSLGPILIGEYTSPKYRGA 554
R + G S+ +S L + + E + + RGA
Sbjct: 124 RIVMGWSVSVSLGLSALFLSEASPKQNRGA 153
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 291 ESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARF 470
+S+ + + +L G T+ KYGRK I+ ++ I+ L + N + ARF
Sbjct: 85 QSFFSLVQYLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLSPNRQLLFIARF 144
Query: 471 LQGISM 488
G+S+
Sbjct: 145 CSGLSI 150
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +3
Query: 327 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTSL 506
L GN + + KYGR+ + S+L I +L + +N Y R L GIS+ + ++
Sbjct: 127 LLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIGISVSGTLTV 186
Query: 507 GPILIGEYTSPKYR 548
G E SP R
Sbjct: 187 GWTYATEMISPNRR 200
>Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical
protein C14A6.2 protein.
Length = 422
Score = 35.1 bits (77), Expect = 0.044
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Frame = +3
Query: 243 PQLQSQKPVML-IDESTESWIAAIPGFALLFGNFTIPTIMGKYG-RKVANIISVLPVIVG 416
P+L K + ++W+ + +FG F + + YG RKV +L
Sbjct: 8 PELTGNKTQYIGYSRQEKTWLFSTVAVGAMFGLFPVIIGISTYGLRKVFFAAGMLTSFTT 67
Query: 417 WLL-ITSASNTYFILAARFLQGIS-MGMSTSLGPILIGEYTSPKYRGAFLSSL 569
+L+ I + N L RFLQG+S G ++G I + S +G F+++L
Sbjct: 68 FLIPIVATMNFNLFLLMRFLQGMSYAGCMPAVGAI-TSSWASLTQQGLFIAAL 119
>AF125971-4|AAD14766.1| 381|Caenorhabditis elegans Hypothetical
protein Y4C6B.3 protein.
Length = 381
Score = 34.7 bits (76), Expect = 0.058
Identities = 23/117 (19%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Frame = +3
Query: 318 FALLFGNFTIPTIMGKYGRKVANIISVL--PVIVGWLLITSASNTYFILAARFLQGISMG 491
F + G F I + + G ++A + L + + ++ + +F++A RFLQG++
Sbjct: 26 FGTIVGIFPINMLYVQCGARLAFFSAGLLSAMTTAFTPWAASQSMWFLVALRFLQGVAYS 85
Query: 492 MSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVG-----SYVTWQWTAFV 647
+ I+I ++ F+++L A++++ + V S++ W+W+ ++
Sbjct: 86 ADFAAIGIIISKWAPLDETAVFIATLTSFTAISSIITNGVSGVICESHLGWRWSFYL 142
>Z82278-4|CAB05257.2| 487|Caenorhabditis elegans Hypothetical
protein M162.5 protein.
Length = 487
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +3
Query: 291 ESWIAAIPGFALLFGNFTIPTIMGKYG-RKVANIISVLPVIVGWLL-ITSASNTYFILAA 464
++W+ + +FG F + + YG RKV +L + +L+ I + + L
Sbjct: 89 KTWLFSTVAVGAMFGLFPVIIGISTYGLRKVFFAAGMLTSLTTFLIPIVAPMDFNLFLLM 148
Query: 465 RFLQGIS-MGMSTSLGPILIGEYTSPKYRGAFLSSL 569
RFLQG+S G ++G I + S +G F+++L
Sbjct: 149 RFLQGMSYAGCMPAVGAI-TSSWASLTQQGLFIAAL 183
>U64844-14|AAO25986.1| 375|Caenorhabditis elegans Hypothetical
protein T22F3.11b protein.
Length = 375
Score = 32.3 bits (70), Expect = 0.31
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Frame = +3
Query: 285 STESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSAS--NTYFIL 458
S + WI + G I + KYG ++ I+ L I+ LI A+ N + ++
Sbjct: 62 SEKKWILWAVALGTMLGTVPINMLYVKYGARLPFFIAGLTSIISTALIPWAAGFNYWILI 121
Query: 459 AARFLQGISMGMS-TSLGPILI--GEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYVTW 629
RF QG++ ++G I + T A ++S + ++AT +V V ++
Sbjct: 122 LLRFCQGLAYSADFAAIGLITVRWAPLTETATFIAVMTSFTGISSVATNSVTGVICESSY 181
Query: 630 QW 635
W
Sbjct: 182 GW 183
>U64844-13|AAD56301.1| 453|Caenorhabditis elegans Hypothetical
protein T22F3.11a protein.
Length = 453
Score = 32.3 bits (70), Expect = 0.31
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Frame = +3
Query: 285 STESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSAS--NTYFIL 458
S + WI + G I + KYG ++ I+ L I+ LI A+ N + ++
Sbjct: 62 SEKKWILWAVALGTMLGTVPINMLYVKYGARLPFFIAGLTSIISTALIPWAAGFNYWILI 121
Query: 459 AARFLQGISMGMS-TSLGPILI--GEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYVTW 629
RF QG++ ++G I + T A ++S + ++AT +V V ++
Sbjct: 122 LLRFCQGLAYSADFAAIGLITVRWAPLTETATFIAVMTSFTGISSVATNSVTGVICESSY 181
Query: 630 QW 635
W
Sbjct: 182 GW 183
>AF067222-2|AAC17018.2| 458|Caenorhabditis elegans Hypothetical
protein H11E01.2 protein.
Length = 458
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +3
Query: 450 FILAARFLQGISMGMSTSLGPILIGEYTSPKYRGAF---LSSLCLVMAMATLTV 602
F++ ARF QG+S G + +++ + S K G F LSS + M T+ V
Sbjct: 114 FLVVARFFQGVSFGADFAAIGLIVVNWASLKQHGLFISLLSSFSQISVMFTMPV 167
>U64853-5|AAB04978.2| 460|Caenorhabditis elegans Hypothetical
protein K11G9.5 protein.
Length = 460
Score = 31.1 bits (67), Expect = 0.71
Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +3
Query: 264 PVMLID--ESTESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSA 437
PV L D + + +I + G F + + ++G + ++ + ++ LI A
Sbjct: 54 PVSLFDYTPNEKKYIMWAVAAGTIIGTFPVNYVFVRFGGRWTFFLAGVISVIATTLIPLA 113
Query: 438 SNTYF--ILAARFLQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSV 611
+ T F +LAARF QG++ + +L + FL +L +++ ++V
Sbjct: 114 AQTSFHALLAARFCQGLAFAADFAAIGLLTVRWAPLSETAIFLGALTSFTNFSSVLTNAV 173
Query: 612 GSYV 623
+
Sbjct: 174 SGAI 177
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +3
Query: 324 LLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTS 503
LL G + ++GR+ II +L + L + A N +L ARF+QG T+
Sbjct: 141 LLIGQL-FAVVADRFGRRPIIIICLLLTGIVGSLGSLAPNFPLLLVARFIQGSCYTPLTT 199
Query: 504 LGPILIGEYTSPKYRGAFLSSL 569
+ +L GE S +R L+S+
Sbjct: 200 VNYVLSGE--SIPHRSQSLTSI 219
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/121 (20%), Positives = 53/121 (43%)
Frame = +3
Query: 291 ESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARF 470
+S + I +L G F+ + GRK + ++ I+ + A N +L RF
Sbjct: 84 KSLFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRF 143
Query: 471 LQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYVTWQWTAFVC 650
G+S+G + + + E P+ R A + +A +T+ ++ + W+ ++ C
Sbjct: 144 FLGLSVGGTLVVVCTFVMEMLLPQQRMALRAFFNWGVARLMMTLIAM-ALPEWRMSSIAC 202
Query: 651 S 653
+
Sbjct: 203 A 203
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +3
Query: 150 TPFV-KQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKPVMLIDESTESWIAAIPGFAL 326
TP V K CF+ S + F + GI IL + + + T WI+ I
Sbjct: 274 TPHVLKACFIGS----MLQAFQQLAGINTILYYTADIIRSAGIENYHTIIWISVILSICN 329
Query: 327 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLI 428
L G F + K GR+ + S V+V +LI
Sbjct: 330 LIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVLI 363
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/121 (20%), Positives = 53/121 (43%)
Frame = +3
Query: 291 ESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARF 470
+S + I +L G F+ + GRK + ++ I+ + A N +L RF
Sbjct: 84 KSLFSQIQFAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRF 143
Query: 471 LQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYVTWQWTAFVC 650
G+S+G + + + E P+ R A + +A +T+ ++ + W+ ++ C
Sbjct: 144 FLGLSVGGTLVVVCTFVMEMLLPQQRMALRAFFNWGVARLMMTLIAM-ALPEWRMSSIAC 202
Query: 651 S 653
+
Sbjct: 203 A 203
>Z81557-7|CAB04538.1| 421|Caenorhabditis elegans Hypothetical
protein F59A1.13 protein.
Length = 421
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/62 (20%), Positives = 30/62 (48%)
Frame = +3
Query: 438 SNTYFILAARFLQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGS 617
SN Y ++ R LQG+ + + ++ ++ G + G F++ L V ++ + V
Sbjct: 88 SNIYAVIFCRVLQGLGVSVIMTVVGVIPGTWAPTSETGTFMAILSCVFQLSMIICMPVSG 147
Query: 618 YV 623
++
Sbjct: 148 FL 149
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 500 CAHSHRDPLEKSCSQDEVCVGGACD 426
C H +PL K+CS + +GGACD
Sbjct: 932 CNHGICEPLTKTCSCAKGWMGGACD 956
>U64844-12|AAB18312.4| 417|Caenorhabditis elegans Hypothetical
protein T22F3.10 protein.
Length = 417
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/111 (18%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +3
Query: 285 STESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNT--YFIL 458
S + WI + G I + KYG + +I+ + + L+ A+ +F++
Sbjct: 25 SGKKWIMWAVAAGTIIGTIPINLLYVKYGARYPFLIAGVVSCLATALVPLAAKISFFFLI 84
Query: 459 AARFLQGISMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSV 611
RFLQG++ + ++ + F++ L ++++ +S+
Sbjct: 85 VLRFLQGLAYSADFAAIGLMTVRWAPLSETATFVAILTAFTGISSVATNSL 135
>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform a protein.
Length = 1117
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -3
Query: 466 LAAKMKYVLEALVINSQPTITGRTLMILATFRPYLPMMVGIVKLPNNSAKP 314
LA KY+L+ +I P R + + Y + VG+V P +SA P
Sbjct: 976 LATFHKYILQPTLIEHDPGELPRRVQSQSALNTYGSVNVGVVPTPPSSAAP 1026
>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
morphology protein1, isoform b protein.
Length = 1122
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -3
Query: 466 LAAKMKYVLEALVINSQPTITGRTLMILATFRPYLPMMVGIVKLPNNSAKP 314
LA KY+L+ +I P R + + Y + VG+V P +SA P
Sbjct: 981 LATFHKYILQPTLIEHDPGELPRRVQSQSALNTYGSVNVGVVPTPPSSAAP 1031
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = +3
Query: 294 SWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFL 473
+W+A I +L G T + +GRK + + I+ + A + A RF+
Sbjct: 97 AWVATIQFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVASGFAPSWEVFAAFRFI 156
Query: 474 QGISMGMSTSLGPILIGEYTSPKYRGAFLSS 566
G S+ + I E+ P+ R FL S
Sbjct: 157 VGTSIASILIVFYAYILEFIEPEQR-VFLRS 186
>AF125952-2|AAD14700.1| 478|Caenorhabditis elegans Hypothetical
protein C01B4.8 protein.
Length = 478
Score = 29.1 bits (62), Expect = 2.9
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 7/126 (5%)
Frame = +3
Query: 279 DESTESWIAAIPGFALLFGNFTIPTIMGKYG-RKVANIISVLPVIVGWLLITSAS--NTY 449
D + +S + + L G +M + G R V +I V ++ G +L A N +
Sbjct: 82 DSNMKSLVFSSMAVGGLLGLLIAMPLMHRVGVRLVLSICGVFSIL-GTILFPLAVEWNFF 140
Query: 450 FILAARFLQGISMGM-STSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYV- 623
+L RFLQG+ + M T LG + + G FL+ L + + + ++
Sbjct: 141 SVLVVRFLQGLGISMVFTVLGSVPTA-WAPNNESGTFLAVLSCAFQWSNVICMPISGFLC 199
Query: 624 --TWQW 635
+W W
Sbjct: 200 ESSWGW 205
>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
tyrosine kinase protein.
Length = 1122
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -3
Query: 466 LAAKMKYVLEALVINSQPTITGRTLMILATFRPYLPMMVGIVKLPNNSAKP 314
LA KY+L+ +I P R + + Y + VG+V P +SA P
Sbjct: 981 LATFHKYILQPTLIEHDPGELPRRVQSQSALNTYGSVNVGVVPTPPSSAAP 1031
>AC006722-8|AAK68418.2| 478|Caenorhabditis elegans Hypothetical
protein Y19D10A.5 protein.
Length = 478
Score = 29.1 bits (62), Expect = 2.9
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 7/126 (5%)
Frame = +3
Query: 279 DESTESWIAAIPGFALLFGNFTIPTIMGKYG-RKVANIISVLPVIVGWLLITSAS--NTY 449
D + +S + + L G +M + G R V +I V ++ G +L A N +
Sbjct: 82 DSNMKSLVFSSMAVGGLLGLLIAMPLMHRVGVRLVLSICGVFSIL-GTILFPLAVEWNFF 140
Query: 450 FILAARFLQGISMGM-STSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHSVGSYV- 623
+L RFLQG+ + M T LG + + G FL+ L + + + ++
Sbjct: 141 SVLVVRFLQGLGISMVFTVLGSVPTA-WAPNNESGTFLAVLSCAFQWSNVICMPISGFLC 199
Query: 624 --TWQW 635
+W W
Sbjct: 200 ESSWGW 205
>Z71185-12|CAA94906.3| 460|Caenorhabditis elegans Hypothetical
protein C35A5.3 protein.
Length = 460
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +3
Query: 315 GFALLFGNFTIPT--IMGKYGRKVANIISVLPVIVGWLLITSASNT--YFILAARFLQGI 482
G +FG TIPT ++ KYG K +++ L + LI A+ T L R LQG+
Sbjct: 72 GAGTIFG--TIPTNWVVVKYGAKWPFLVAGLVSLFSTALIPIAAKTSLTLFLFLRVLQGL 129
Query: 483 SMGMSTSLGPILIGEYTSPKYRGAFLSSLCLVMAMATLTVHS 608
+ + I+ + K F++ L +A++ +S
Sbjct: 130 AYSTDFAAIGIMTVRWAPLKETAFFIALLTCFTGVASMITNS 171
>Z92781-1|CAB07180.2| 250|Caenorhabditis elegans Hypothetical
protein F09C3.2 protein.
Length = 250
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 307 AAIQDSVDSSISITGFCDWSCGIRIAVIPKTRPNCAMLI 191
AA D ++ I D CG + ++PK P+CA+ I
Sbjct: 138 AATMDQMNKMNVIPFLDDIICGNDVGIVPKPSPHCAIQI 176
>Z50016-14|CAI06050.2| 177|Caenorhabditis elegans Hypothetical
protein T21C12.8 protein.
Length = 177
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 346 YLPSWANMDEKSPISSVFCP 405
Y+ +N D K+PIS+VFCP
Sbjct: 6 YIEMLSNGDIKAPISAVFCP 25
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +3
Query: 150 TPFV-KQCFVTSGVAISMAQFGLVFGITAILIPQLQSQKPVMLIDESTESWIAAIPGFAL 326
TP V K CF+ S + F + GI IL + + + T WI+ +
Sbjct: 273 TPHVLKACFIGS----MLQAFQQLAGINTILYYTADIIRSSGISNNHTTIWISVLLSLCN 328
Query: 327 LFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLI 428
G F +++ K GR++ + S V++ + I
Sbjct: 329 FIGPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFI 362
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +3
Query: 291 ESWIAAIPGFALLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARF 470
+S+ + + +L G ++ ++GR+ I+ + I A + + RF
Sbjct: 85 QSFFSQVQYVGVLIGTLLFGSLSDRFGRRPIGILVISNAICSTFASGLAPSVKILFPLRF 144
Query: 471 LQGISMG 491
L G+S+G
Sbjct: 145 LVGLSIG 151
>Z74042-3|CAA98529.2| 523|Caenorhabditis elegans Hypothetical
protein T11F9.4 protein.
Length = 523
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 396 VLPVIVGWLLITSASNTYFILAARFLQGIS 485
V+PV+V LLI S ++T F A+R+LQ +S
Sbjct: 298 VVPVMVAILLIGSLNSTMF-SASRYLQAVS 326
>Z36752-5|CAA85328.2| 533|Caenorhabditis elegans Hypothetical
protein F35H8.6 protein.
Length = 533
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 240 IPQLQSQKPVMLIDESTESWIAAIP-GFALLFGNFTI 347
I +Q +KP L E T SWI+A P GF +L FT+
Sbjct: 268 IGAIQCRKPKELPKEFT-SWISAYPDGFVVLSTGFTV 303
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +3
Query: 324 LLFGNFTIPTIMGKYGRKVANIISVLPVIVGWLLITSASNTYFILAARFLQGISMGMSTS 503
+L GN + + + GRK I+S+L I L + ++ R L GI + +
Sbjct: 119 VLIGNIILGYVADQIGRKKTFILSMLIGIPSLSLSATFNSIAAFYIFRALTGIGIAGTMI 178
Query: 504 LGPILIGEYTSPKYR 548
+G E SP R
Sbjct: 179 VGWAYFSELVSPHQR 193
>Z19158-3|CAA79572.2| 305|Caenorhabditis elegans Hypothetical
protein T23G5.6 protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 149 HAICEAVLRNIRCGYQHGAVRSRLWYHRDPDTAAPITKTGN 271
H + E+VL + C A + Y +DP+ PI GN
Sbjct: 86 HVVDESVLNGLYCNILEAAKKP---YQKDPEPMPPICTNGN 123
>AF099000-1|AAK71876.1| 334|Caenorhabditis elegans Serpentine
receptor, class i protein60 protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = -3
Query: 445 VLEALVINSQPTITGRTLMILATFRPYLPMMVGIVKLPNNSAKPGIAAI 299
++E L++ + + L+++ATF PY ++ +VK A+ G++ +
Sbjct: 278 IVEYLLVIACSHSSLNVLVLIATFPPYRKYVLSLVKRKKKIARTGLSVL 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,443,837
Number of Sequences: 27780
Number of extensions: 332621
Number of successful extensions: 1024
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -