Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C21
(370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical pr... 57 5e-09
AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical... 47 4e-06
AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical ... 44 3e-05
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 29 1.4
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 29 1.4
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 29 1.4
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 29 1.4
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 29 1.4
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 29 1.4
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 29 1.4
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 29 1.4
U58742-1|AAB36857.2| 170|Caenorhabditis elegans Hypothetical pr... 27 4.2
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 27 4.2
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 27 4.2
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 27 4.2
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 27 4.2
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical... 27 5.5
U58758-2|AAB93428.1| 424|Caenorhabditis elegans Hypothetical pr... 26 9.7
U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical pr... 26 9.7
>Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical
protein B0513.3 protein.
Length = 62
Score = 56.8 bits (131), Expect = 5e-09
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +3
Query: 57 MAKSKNHTNHNQNRKAHRNGIKKPRK 134
MAKSKNHTNHNQN+KAHRNGI KP+K
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGITKPKK 26
>AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical
protein Y47H9C.14 protein.
Length = 87
Score = 47.2 bits (107), Expect = 4e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 63 KSKNHTNHNQNRKAHRNGIKKPRK 134
K +NHTNHN+N KAHRNGI KP+K
Sbjct: 14 KPENHTNHNRNNKAHRNGITKPKK 37
>AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical
protein Y37H9A.5 protein.
Length = 167
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 63 KSKNHTNHNQNRKAHRNGIKKPR 131
KSKNHTNHNQN AHR GI KP+
Sbjct: 80 KSKNHTNHNQNNTAHRIGITKPK 102
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 657 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 716
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 717 GKRDNKDPSK 726
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 784
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 785 GKRDNKDPSK 794
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 784
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 785 GKRDNKDPSK 794
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 784
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 785 GKRDNKDPSK 794
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 784
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 785 GKRDNKDPSK 794
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 784
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 785 GKRDNKDPSK 794
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 725 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 784
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 785 GKRDNKDPSK 794
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 283 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 342
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 343 GKRDNKDPSK 352
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 305 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 364
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 365 GKRDNKDPSK 374
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 LSSDSKWIENSSKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLRMDPKFLRNQRF 192
+ S+ +++EN+ ++Q++ IIQ + ++TEM+ + + G P L + + + +
Sbjct: 657 VESEKQYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCS 716
Query: 193 CKKGNLKPAK 222
K+ N P+K
Sbjct: 717 GKRDNKDPSK 726
>U58742-1|AAB36857.2| 170|Caenorhabditis elegans Hypothetical
protein F31A3.3 protein.
Length = 170
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 66 SKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFKESKVLQEG*P 209
++ +N+NQ ++ +KKP K + L +K FKE V+++ P
Sbjct: 17 NRKSSNNNQENAVNQMVVKKPIKRKTALPLQVPAKKFKEVVVVEQPSP 64
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 4.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 117 YHFCELCGFGYDLYDSL 67
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 13 SVLSSDSKWIEN--SSKWQSQRIIQIITKTAKLTE 111
++LS KW+ + S KWQ RI IT+ AK+T+
Sbjct: 272 AILSKCGKWMTDSLSEKWQQHRI--QITEKAKMTK 304
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 13 SVLSSDSKWIEN--SSKWQSQRIIQIITKTAKLTE 111
++LS KW+ + S KWQ RI IT+ AK+T+
Sbjct: 272 AILSKCGKWMTDSLSEKWQQHRI--QITEKAKMTK 304
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 4.2
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 117 YHFCELCGFGYDLYDSL 67
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
protein Y110A7A.16 protein.
Length = 1250
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 7 LASVLSSDSKWIENSSKWQSQRIIQIIT 90
L +VLS + +W+EN SQ I+ +IT
Sbjct: 1144 LLNVLSENYRWLENIGNELSQLILVLIT 1171
>U58758-2|AAB93428.1| 424|Caenorhabditis elegans Hypothetical
protein ZK1127.6 protein.
Length = 424
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 1 KXLASVLSSDSKWIENSSKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPLRMDPKFLR 180
K + SVL +D +W+ ++ S+R ++ E ++ GR GT PP + R
Sbjct: 371 KDILSVLENDKRWVRMTAMSASER--------DRMLEDHIENLGRKGTPPPPTQQERDRR 422
Query: 181 NQ 186
Q
Sbjct: 423 KQ 424
>U41019-2|AAA82328.1| 518|Caenorhabditis elegans Hypothetical
protein C04E7.3 protein.
Length = 518
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 157 RMDPKFLRNQRFCKKGNLK 213
R + FLRN R+ K GNLK
Sbjct: 348 RNEVDFLRNARYSKHGNLK 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,701,899
Number of Sequences: 27780
Number of extensions: 115321
Number of successful extensions: 445
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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