Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_C19
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...   170   1e-42
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...   170   1e-42
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...   170   1e-42

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score =  170 bits (414), Expect = 1e-42
 Identities = 75/113 (66%), Positives = 92/113 (81%)
 Frame = +2

Query: 218 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 397
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105

Query: 398 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHXIRVMLYPSRI 556
             P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGH IR+MLYPSRI
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score =  170 bits (414), Expect = 1e-42
 Identities = 75/113 (66%), Positives = 92/113 (81%)
 Frame = +2

Query: 218 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 397
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105

Query: 398 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHXIRVMLYPSRI 556
             P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGH IR+MLYPSRI
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score =  170 bits (414), Expect = 1e-42
 Identities = 75/113 (66%), Positives = 92/113 (81%)
 Frame = +2

Query: 218 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 397
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK CVYVY+A+ +  +P
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105

Query: 398 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHXIRVMLYPSRI 556
             P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGH IR+MLYPSRI
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,658,099
Number of Sequences: 53049
Number of extensions: 503010
Number of successful extensions: 1455
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)