Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_C17
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001525-1|AAN71280.1|  332|Drosophila melanogaster RE04093p pro...   171   7e-43
AE014134-962|AAF52286.2|  332|Drosophila melanogaster CG11030-PA...   171   7e-43
AY051990-1|AAK93414.1|  776|Drosophila melanogaster LD45682p pro...    29   5.5  
AE014296-2710|AAF49482.1|  776|Drosophila melanogaster CG4925-PA...    29   5.5  
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P...    29   7.3  
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P...    29   7.3  
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P...    28   9.6  

>BT001525-1|AAN71280.1|  332|Drosophila melanogaster RE04093p
           protein.
          Length = 332

 Score =  171 bits (416), Expect = 7e-43
 Identities = 86/121 (71%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
 Frame = +3

Query: 300 MVQACE---ETEQPNIPQAMKLLKEMNVNVQQVSQLVDNMLVRVKNGELSTDKGLTFLEM 470
           MVQA +   E +  +IPQA++LL EMN NV+QV+ LV+ ML RVK GEL+T+ GL+FLE+
Sbjct: 1   MVQALDYDCEAQGQDIPQAIQLLGEMNSNVKQVTDLVEGMLQRVKRGELTTEYGLSFLEV 60

Query: 471 KYQMLLSYLINLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPIDSKLKYQIDKLVK 650
           KY MLL YLINLTY+VLRKCSGE IE DPSI+RLIEIRTVLEKIRPID KL+YQIDKLVK
Sbjct: 61  KYHMLLDYLINLTYVVLRKCSGETIEGDPSIERLIEIRTVLEKIRPIDHKLRYQIDKLVK 120

Query: 651 S 653
           +
Sbjct: 121 T 121


>AE014134-962|AAF52286.2|  332|Drosophila melanogaster CG11030-PA
           protein.
          Length = 332

 Score =  171 bits (416), Expect = 7e-43
 Identities = 86/121 (71%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
 Frame = +3

Query: 300 MVQACE---ETEQPNIPQAMKLLKEMNVNVQQVSQLVDNMLVRVKNGELSTDKGLTFLEM 470
           MVQA +   E +  +IPQA++LL EMN NV+QV+ LV+ ML RVK GEL+T+ GL+FLE+
Sbjct: 1   MVQALDYDCEAQGQDIPQAIQLLGEMNSNVKQVTDLVEGMLQRVKRGELTTEYGLSFLEV 60

Query: 471 KYQMLLSYLINLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPIDSKLKYQIDKLVK 650
           KY MLL YLINLTY+VLRKCSGE IE DPSI+RLIEIRTVLEKIRPID KL+YQIDKLVK
Sbjct: 61  KYHMLLDYLINLTYVVLRKCSGETIEGDPSIERLIEIRTVLEKIRPIDHKLRYQIDKLVK 120

Query: 651 S 653
           +
Sbjct: 121 T 121


>AY051990-1|AAK93414.1|  776|Drosophila melanogaster LD45682p
           protein.
          Length = 776

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
 Frame = +3

Query: 210 QLELYRNFTCSFQKFYPISIINYRSTILINMVQAC-EETEQPNIPQAMKLLK-----EMN 371
           QLE  R  T + QK   I++I   + IL    QAC +E E  N  +   ++K     ++ 
Sbjct: 138 QLEQLR--TSNVQKDNMITLIQRENAILGKEKQACRKEMEMANKEKEATVIKFAMKEKLL 195

Query: 372 VNVQQVSQLVDNMLVRVKNGELSTDKGLTFLEMKYQMLLSYLINLTYIVLRKCSGERIES 551
           ++ ++  + V+  L   K       K +  +  ++  +      +TYI+  KC+  R   
Sbjct: 196 IDAKKEKEAVEKQLAEAK-------KEVKNVSTRFLAVSEEKSRMTYIIDEKCNEVR--- 245

Query: 552 DPSIDRLIEIRTVLEKIRPIDSKLKYQIDKL 644
                R  E      ++  ++SKLKY I+KL
Sbjct: 246 --KYQR--ECEKYKTEMGHLESKLKYHINKL 272


>AE014296-2710|AAF49482.1|  776|Drosophila melanogaster CG4925-PA
           protein.
          Length = 776

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
 Frame = +3

Query: 210 QLELYRNFTCSFQKFYPISIINYRSTILINMVQAC-EETEQPNIPQAMKLLK-----EMN 371
           QLE  R  T + QK   I++I   + IL    QAC +E E  N  +   ++K     ++ 
Sbjct: 138 QLEQLR--TSNVQKDNMITLIQRENAILGKEKQACRKEMEMANKEKEATVIKFAMKEKLL 195

Query: 372 VNVQQVSQLVDNMLVRVKNGELSTDKGLTFLEMKYQMLLSYLINLTYIVLRKCSGERIES 551
           ++ ++  + V+  L   K       K +  +  ++  +      +TYI+  KC+  R   
Sbjct: 196 IDAKKEKEAVEKQLAEAK-------KEVKNVSTRFLAVSEEKSRMTYIIDEKCNEVR--- 245

Query: 552 DPSIDRLIEIRTVLEKIRPIDSKLKYQIDKL 644
                R  E      ++  ++SKLKY I+KL
Sbjct: 246 --KYQR--ECEKYKTEMGHLESKLKYHINKL 272


>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
            isoform A protein.
          Length = 4345

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -2

Query: 652  LLTSLSIWYFNL-ESIGRIFSSTVLISMSLSMEGSDSILSPEHFLNTI*VKFIK*LRSIW 476
            L+ ++   Y NL +++ R F    L+ +S  +E    I   + F+  + +KFIK + ++W
Sbjct: 3439 LIETIKTTYNNLLDAVARFFHGESLVYISGLLE--KGIAKYDSFIKDLHIKFIKYIENLW 3496

Query: 475  Y 473
            +
Sbjct: 3497 H 3497


>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
            isoform B protein.
          Length = 4374

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -2

Query: 652  LLTSLSIWYFNL-ESIGRIFSSTVLISMSLSMEGSDSILSPEHFLNTI*VKFIK*LRSIW 476
            L+ ++   Y NL +++ R F    L+ +S  +E    I   + F+  + +KFIK + ++W
Sbjct: 3468 LIETIKTTYNNLLDAVARFFHGESLVYISGLLE--KGIAKYDSFIKDLHIKFIKYIENLW 3525

Query: 475  Y 473
            +
Sbjct: 3526 H 3526


>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
           protein.
          Length = 4129

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 23/91 (25%), Positives = 42/91 (46%)
 Frame = +3

Query: 228 NFTCSFQKFYPISIINYRSTILINMVQACEETEQPNIPQAMKLLKEMNVNVQQVSQLVDN 407
           NFT     F P+ +I Y +TI I +V+A   +  P  P     +K + V+ + + Q   N
Sbjct: 658 NFTRMPGFFQPLPLIAYETTIEILIVKARPPSPPPPPPPT---IKRVLVHTESLEQKTQN 714

Query: 408 MLVRVKNGELSTDKGLTFLEMKYQMLLSYLI 500
               + +   S+D  L   + K + + S ++
Sbjct: 715 FFEGIYDA-ASSDTSLRNAKQKIRSIKSTVL 744


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,180,575
Number of Sequences: 53049
Number of extensions: 443943
Number of successful extensions: 936
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)