Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C17
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000262-6|AAN60524.1| 318|Caenorhabditis elegans Lipid deplete... 58 7e-09
U41277-8|AAA82479.1| 285|Caenorhabditis elegans Hypothetical pr... 33 0.18
AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical... 31 0.71
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 31 0.71
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 31 0.71
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 30 1.6
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 28 5.0
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 28 5.0
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 27 8.8
L23647-2|AAK29995.1| 773|Caenorhabditis elegans Hypothetical pr... 27 8.8
L23647-1|AAL11102.1| 624|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical ... 27 8.8
>AF000262-6|AAN60524.1| 318|Caenorhabditis elegans Lipid depleted
protein 2 protein.
Length = 318
Score = 57.6 bits (133), Expect = 7e-09
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +3
Query: 318 ETEQPNIPQAMKLLKEMNVNVQQVSQLVDNMLVRVKNGELSTDK-GLTFLEMKYQMLLSY 494
ETEQ L+ E+ + + + R++ E + DK GL+ L++K + +Y
Sbjct: 3 ETEQEAFAD---LVAELETQTAEAVKAFSKVFDRME--ETNDDKEGLSLLKLKNYEMTAY 57
Query: 495 LINLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPIDSKLKYQIDKLV 647
L LT ++ + GE I +PS+ R ++ R +EK++P++ K+K QI+KL+
Sbjct: 58 LGELTVLMSKMMKGESITVEPSVKRALKHRVFIEKMKPVEDKMKPQIEKLL 108
>U41277-8|AAA82479.1| 285|Caenorhabditis elegans Hypothetical
protein C06E4.8 protein.
Length = 285
Score = 33.1 bits (72), Expect = 0.18
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +3
Query: 213 LELYRNFTCSFQKFYPISIINYRSTILINMVQACEETEQPNIPQAMKLLKEMNVNVQQVS 392
L Y N C YP++I ++ T + M+ + ++ PN +L +++ +
Sbjct: 2 LYYYENVYCK----YPLTIFQFQFTNDLEMIHSRQQL--PNKETIAELRRQIGKQRKHYE 55
Query: 393 QLVDNMLVRVKNGELSTDKGLTFLEMKYQMLLSYLINLTYIVLRKCSGERIESDPSIDR- 569
QL+ N+ + + +K L+ L K+ L YL+ L L K +G+ ++ I R
Sbjct: 56 QLIKNVRAKHCKEKEELEKSLSDLYDKFIEKLKYLMELN--ALDKENGKLVDMVFEISRN 113
Query: 570 LIEIRTVLEKIRPIDSKLK 626
+I T+ + ++ LK
Sbjct: 114 WTQINTLFAEFFGMNETLK 132
>AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical
protein Y54G2A.21 protein.
Length = 967
Score = 31.1 bits (67), Expect = 0.71
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +3
Query: 237 CSFQKFYPISIINYRSTILINMVQACEETEQPNIPQAMKLLKEMNVNVQQVSQLVDNMLV 416
C FQ I+ ++ N C + MK+ K+MNV+ + +D
Sbjct: 492 CKFQS----DILGHQGHSSHNFCFKCFAQNPRGAEERMKI-KDMNVDETFHPRTIDLYKA 546
Query: 417 RVKNGELSTDKGLTFLEMKYQMLLSYLINLTYIVL 521
+NG+L KG T L + + ++ YLI L +I++
Sbjct: 547 CCENGDLGVRKGCTPL-LPHVAIMFYLIPLLHIIM 580
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = -2
Query: 634 IWY---FNLESIGRIFSSTVLISMS--LSMEGSDSILSPEHFLNTI*VKFIK*LRSIWYF 470
+WY F L + R ++T ++++S + G + + H +N + F K + +W+F
Sbjct: 308 LWYDIEFILTKVTRTNNATPILTLSGEFCIPGLQAFYNIFHVMNNVLRLFQKVKKEMWHF 367
Query: 469 ISKKVRPLSVESSPF 425
+ V+ L V PF
Sbjct: 368 VCGYVKILEVRLKPF 382
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 31.1 bits (67), Expect = 0.71
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = -2
Query: 634 IWY---FNLESIGRIFSSTVLISMS--LSMEGSDSILSPEHFLNTI*VKFIK*LRSIWYF 470
+WY F L + R ++T ++++S + G + + H +N + F K + +W+F
Sbjct: 342 LWYDIEFILTKVTRTNNATPILTLSGEFCIPGLQAFYNIFHVMNNVLRLFQKVKKEMWHF 401
Query: 469 ISKKVRPLSVESSPF 425
+ V+ L V PF
Sbjct: 402 VCGYVKILEVRLKPF 416
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 357 LKEMNVNVQQVSQLVDNMLVRVKNGELSTDKGLTFLEMKYQMLLSYLINLTYIVL 521
+K+MNV+ + +D +NG+L KG T L + + ++ YLI L +I++
Sbjct: 3 IKDMNVDETFHPRTIDLYKACCENGDLGVRKGCTPL-LPHVAIMFYLIPLLHIIM 56
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 501 NLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPIDSKLKYQIDKLVKS 653
N + I+ + R E++ ++ +LIE+ T K R + +LK +IDKL ++
Sbjct: 274 NRSPIIAEEAKKRRNEAE-AVRKLIEVETQNAKKRAVIQELKDRIDKLTQA 323
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 501 NLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPIDSKLKYQIDKLVKS 653
N + I+ + R E++ ++ +LIE+ T K R + +LK +IDKL ++
Sbjct: 272 NRSPIIAEEAKKRRNEAE-AVRKLIEVETQNAKKRAVIQELKDRIDKLTQA 321
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 501 NLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPIDSKLKYQIDKLVKS 653
N + I+ + R E++ ++ +LIE+ T K R + +LK +IDKL ++
Sbjct: 274 NRSPIIAEEAKKRRNEAE-AVRKLIEVETQNAKKRAVIQELKDRIDKLTQA 323
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 501 NLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIRPIDSKLKYQIDKLVKS 653
N + I+ + R E++ ++ +LIE+ T K R + +LK +IDKL ++
Sbjct: 272 NRSPIIAEEAKKRRNEAE-AVRKLIEVETQNAKKRAVIQELKDRIDKLTQA 321
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 27.5 bits (58), Expect = 8.8
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +3
Query: 330 PNIPQAMKLLKEMNVNVQQVSQ---LVDNMLVRVKNGELSTDKG-LTFLEMKYQMLLSYL 497
PN+ K N +++Q+S+ V N +V + G + KG L K Q ++
Sbjct: 5 PNLLTPYKNTGAANASLRQISEDAFYVVNEVVMKRLGHVPILKGDFHLLPAKVQRFIAEK 64
Query: 498 INLTYIV-LRKCSGERIESDPSIDRLIEIRTVLEKIRPIDS 617
L + C G + E+D ID+LIE R +L K+ ++
Sbjct: 65 AELMRPRGIFICDGSQHEADELIDKLIE-RGMLSKLEAYEN 104
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 27.5 bits (58), Expect = 8.8
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +3
Query: 330 PNIPQAMKLLKEMNVNVQQVSQ---LVDNMLVRVKNGELSTDKG-LTFLEMKYQMLLSYL 497
PN+ K N +++Q+S+ V N +V + G + KG L K Q ++
Sbjct: 5 PNLLTPYKNTGAANASLRQISEDAFYVVNEVVMKRLGHVPILKGDFHLLPAKVQRFIAEK 64
Query: 498 INLTYIV-LRKCSGERIESDPSIDRLIEIRTVLEKIRPIDS 617
L + C G + E+D ID+LIE R +L K+ ++
Sbjct: 65 AELMRPRGIFICDGSQHEADELIDKLIE-RGMLSKLEAYEN 104
>L23647-2|AAK29995.1| 773|Caenorhabditis elegans Hypothetical
protein ZC262.3a protein.
Length = 773
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 483 LLSYLINLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIR 605
L+S+L+N+T+I+ RK + I+ + R+ ++ +EK R
Sbjct: 507 LISFLLNITWILTRKSALWWIQRAERLSRVRKMVEAMEKYR 547
>L23647-1|AAL11102.1| 624|Caenorhabditis elegans Hypothetical
protein ZC262.3b protein.
Length = 624
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 483 LLSYLINLTYIVLRKCSGERIESDPSIDRLIEIRTVLEKIR 605
L+S+L+N+T+I+ RK + I+ + R+ ++ +EK R
Sbjct: 507 LISFLLNITWILTRKSALWWIQRAERLSRVRKMVEAMEKYR 547
>AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical
protein K09H9.1 protein.
Length = 374
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 339 PQAMKLLKEMNVNVQQVSQLVDNM 410
PQ+M +L+E+ +NVQ L+D +
Sbjct: 176 PQSMYILEEVQINVQFAKTLIDEL 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,196,836
Number of Sequences: 27780
Number of extensions: 253141
Number of successful extensions: 634
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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