Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C13
(652 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 244 1e-63
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 225 5e-58
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 198 9e-50
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 171 1e-41
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 163 3e-39
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 140 3e-32
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 135 1e-30
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 134 2e-30
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 133 3e-30
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 128 1e-28
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 126 5e-28
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 100 3e-20
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 89 9e-17
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 86 8e-16
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 84 2e-15
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 78 2e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 68 2e-10
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 58 2e-07
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 57 3e-07
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 55 2e-06
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 54 4e-06
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 54 4e-06
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 52 1e-05
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 50 4e-05
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 48 3e-04
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 48 3e-04
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 46 8e-04
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 44 0.002
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 44 0.003
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 44 0.003
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 44 0.004
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 42 0.017
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 40 0.068
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 39 0.090
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 37 0.36
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 36 0.84
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_Q4UBI9 Cluster: Putative uncharacterized protein; n=3; ... 35 1.9
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 3.4
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 4.5
UniRef50_O50954 Cluster: Putative uncharacterized protein; n=3; ... 33 5.9
UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR fam... 33 7.8
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 7.8
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 244 bits (597), Expect = 1e-63
Identities = 124/205 (60%), Positives = 150/205 (73%)
Frame = +3
Query: 27 MAVGKNKGPVEGXXXXXXXXXLSTHSLAKIGTMSRLRLCSARGKSAPRLSTVPXATKIAS 206
MAVGKNKG +G + + + + R + L TKIAS
Sbjct: 1 MAVGKNKGVSKGGKKGSKKKVVDPFTRKDWYDVKAPNMFKNR-QVGKTLVNRTQGTKIAS 59
Query: 207 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 386
+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKK
Sbjct: 60 DGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKK 119
Query: 387 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDV 566
WQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ I KM II R++
Sbjct: 120 WQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREI 179
Query: 567 TNSELREVVNKLIPDSIAKDIEKAC 641
T+++L+ VV KL+PDSIAKDIEKAC
Sbjct: 180 TSTDLKGVVEKLLPDSIAKDIEKAC 204
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 225 bits (551), Expect = 5e-58
Identities = 121/208 (58%), Positives = 143/208 (68%)
Frame = +3
Query: 27 MAVGKNKGPVEGXXXXXXXXXLSTHSLAKIGTMSRLRLCSARGKSAPRLSTVPXATKIAS 206
MAVGKNK +G + S + + + R L T TKIAS
Sbjct: 1 MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRN-IGKTLVTRTQGTKIAS 59
Query: 207 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 386
+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKK
Sbjct: 60 DGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKK 116
Query: 387 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDV 566
WQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I KKM EI+TR+V
Sbjct: 117 WQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREV 176
Query: 567 TNSELREVVNKLIPDSIAKDIEKACHGI 650
++L+EVVNKLIPDSI KDIEKAC I
Sbjct: 177 QTNDLKEVVNKLIPDSIGKDIEKACQSI 204
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 198 bits (483), Expect = 9e-50
Identities = 98/153 (64%), Positives = 119/153 (77%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 551
+V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R I +KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 552 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
+T T+ +L+E+V K IP+SI ++IEKA I
Sbjct: 567 MTNMATSCDLKELVKKFIPESIGREIEKATSSI 599
Score = 59.7 bits (138), Expect = 6e-08
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 68 KKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQ 187
KK KK DPF +KDWYD+KAPS+F R VG TLV+RTQ
Sbjct: 408 KKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQ 447
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 171 bits (416), Expect = 1e-41
Identities = 83/152 (54%), Positives = 111/152 (73%)
Frame = +3
Query: 195 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 374
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 375 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEII 554
+V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAI +KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 555 TRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
R+ + L+++ NKLIP+ I ++IEKA GI
Sbjct: 173 QREASTCTLQQLTNKLIPEVIGREIEKATQGI 204
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +2
Query: 68 KKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 229
KK L KK DPF RKDWY +KAP+ F+ R VG TLVNR+ +N ++G+ F
Sbjct: 13 KKGLKKKTQDPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIF 66
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 163 bits (396), Expect = 3e-39
Identities = 81/142 (57%), Positives = 109/142 (76%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 551
++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+AI KKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 552 ITRDVTNSELREVVNKLIPDSI 617
+T V++++L+ VV+ LI S+
Sbjct: 171 LTETVSSNDLKTVVDYLIGVSL 192
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Frame = +2
Query: 86 KIVDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQXNENCFGRIEGKSF 229
K VDPFTRK+WY V+AP+ F K +VG T VNRTQ + ++G+ +
Sbjct: 14 KKVDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 140 bits (338), Expect = 3e-32
Identities = 72/163 (44%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Frame = +3
Query: 171 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 350
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 351 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 521
+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 522 RAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
RAI +K+ IT + + E LI + K IEK I
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNI 210
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 68 KKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSFRS 235
KK K+ +DP +RK+WYD +AP FS + G TLV ++ N I+G+ S
Sbjct: 15 KKGAKKRTIDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVES 70
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 135 bits (326), Expect = 1e-30
Identities = 70/146 (47%), Positives = 98/146 (67%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 551
+VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ I K M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 552 ITRDVTNSELREVVNKLIPDSIAKDI 629
IT++ + EL + V+ L + K +
Sbjct: 174 ITKEAASRELTQFVDYLKKTNFQKKL 199
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2
Query: 65 VKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGK 223
VKK +KI +PF++K+WY+VK P F +R VG +VN+T +++G+
Sbjct: 14 VKKGSKRKIAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGR 66
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 134 bits (324), Expect = 2e-30
Identities = 65/153 (42%), Positives = 101/153 (66%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 551
M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++ I KK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 552 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
+ ++V+ + +++ +S+AK+I KA I
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLAKEIGKATRTI 203
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 68 KKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGK 223
KK KK +DP RK+W+++ AP F+ G T +N++ I+G+
Sbjct: 11 KKKGQKKTIDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGR 62
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 133 bits (322), Expect = 3e-30
Identities = 64/116 (55%), Positives = 82/116 (70%)
Frame = +3
Query: 279 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 458
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 459 GFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKD 626
FT K Q+ YAQ T+++ + ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQD 121
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 128 bits (309), Expect = 1e-28
Identities = 56/153 (36%), Positives = 98/153 (64%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 551
+++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+ + ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 552 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
I R ++ +++E V+ L + ++ + + C+ I
Sbjct: 175 IKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPI 207
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 86 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSFRS 235
K + RK+WYDV AP+ F KRQ T+ N+TQ + G+ F +
Sbjct: 20 KAQETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEA 69
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 126 bits (304), Expect = 5e-28
Identities = 73/154 (47%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Frame = +3
Query: 192 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 371
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 372 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGF-TNKDSLSQRKTCYAQHTQVRAIXKKMCE 548
V KWQ ++EA+ DVKT D Y+L +FC+G+ TN + R+ AQ+ QV I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 549 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
I+ D ++L+EV+NKL+PD++ KD+EKAC I
Sbjct: 156 IM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFI 187
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 107 RKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSFRS 235
+KD YDVKA +MF+ R +G T V R Q + + G F +
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEA 54
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 100 bits (239), Expect = 3e-20
Identities = 50/139 (35%), Positives = 83/139 (59%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 578
IEA D+ DG V RVF +G T + +KTCY +H+ + I K M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 579 LREVVNKLIPDSIAKDIEK 635
+++++ KL +++ K IE+
Sbjct: 133 VQKIMKKLANETVGKRIEE 151
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 89.0 bits (211), Expect = 9e-17
Identities = 45/149 (30%), Positives = 81/149 (54%)
Frame = +3
Query: 204 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 383
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 384 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRD 563
KW TLIE ++ KT DGY L++F I + K + KT Y +Q RA+ +++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 564 VTNSELREVVNKLIPDSIAKDIEKACHGI 650
N ++++ ++++ I + IE C I
Sbjct: 172 GINMDIKDFIHRIYSLKIYEKIEINCSKI 200
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 85.8 bits (203), Expect = 8e-16
Identities = 45/142 (31%), Positives = 74/142 (52%)
Frame = +3
Query: 177 TVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLT 356
T ++A++ + RV+EV+L DL + KF L + V L NFHGMD+T
Sbjct: 47 TKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDIT 106
Query: 357 TDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXK 536
K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +
Sbjct: 107 RHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRA 166
Query: 537 KMCEIITRDVTNSELREVVNKL 602
+ E + ++ + +V KL
Sbjct: 167 GIYETLHNELGKVSIPVLVTKL 188
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 68 KKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRT 184
KK+ +K DP+ +K+WY V AP+ F R +G T V +T
Sbjct: 11 KKITQRKNPDPYLKKEWYPVIAPAHFKSRHIGQTPVTKT 49
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 84.2 bits (199), Expect = 2e-15
Identities = 47/152 (30%), Positives = 81/152 (53%)
Frame = +3
Query: 195 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 374
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 375 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEII 554
+++K++T+I+A++D KT DG++LR+F IGFT K + S + YA + R + M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 555 TRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
T + + ++ + + I +I + C I
Sbjct: 169 TDACEANGVEQLCKDFVDEKIENEIVEKCKQI 200
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 77.8 bits (183), Expect = 2e-13
Identities = 47/87 (54%), Positives = 58/87 (66%)
Frame = +3
Query: 171 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 350
L T TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 351 LTTDKLRWMVKKWQTLIEANIDVKTTD 431
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 62.9 bits (146), Expect = 6e-09
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +2
Query: 38 EK*RACRRAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQ 187
+K + + KK KK+VDPF++KDWYDV AP+MF+ R +G TLV RTQ
Sbjct: 4 DKNKRLTKGGKKGAKKKVVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQ 53
Score = 62.5 bits (145), Expect = 8e-09
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +3
Query: 528 IXKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 650
I KKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC I
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSI 151
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +3
Query: 171 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 350
L T TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 351 LTTD 362
L+ D
Sbjct: 105 LSCD 108
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 59 RAVKKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 229
R+ KK KK VD ++KDWYD+KAP+MF+ R +G TLV RTQ + ++G F
Sbjct: 11 RSSKKGAKKKAVDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVF 67
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 58.0 bits (134), Expect = 2e-07
Identities = 40/139 (28%), Positives = 70/139 (50%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 578
I+AN+ V T DG+ +RV I T K A+ +Q+ +I + M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 579 LREVVNKLIPDSIAKDIEK 635
E +N+++ +A +I K
Sbjct: 153 FTEFINEVVTGKVASEIYK 171
Score = 34.7 bits (76), Expect = 1.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 86 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVN 178
K VD F K+WY V AP+ F++ +G TL +
Sbjct: 7 KKVDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 57.2 bits (132), Expect = 3e-07
Identities = 38/136 (27%), Positives = 68/136 (50%)
Frame = +3
Query: 222 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 401
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 402 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSEL 581
A +VKT DG V+R+ +G T + +K+ A+ KKM E + + +
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDS 163
Query: 582 REVVNKLIPDSIAKDI 629
+ + +++ ++A D+
Sbjct: 164 GQFLKEILEGTLAADL 179
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 54.8 bits (126), Expect = 2e-06
Identities = 41/139 (29%), Positives = 66/139 (47%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 578
I+ +V+T+DGY +RV + ++ S KT I KK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 579 LREVVNKLIPDSIAKDIEK 635
E V +I D +++ K
Sbjct: 158 FSEYVKYIISDDAPRELSK 176
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 53.6 bits (123), Expect = 4e-06
Identities = 39/131 (29%), Positives = 68/131 (51%)
Frame = +3
Query: 213 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 392
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 393 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTN 572
+ I+AN+DV+T DG+V+RV FT K A+ +Q++AI + M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 573 SELREVVNKLI 605
++ + + I
Sbjct: 152 TDFETFMQEAI 162
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 53.6 bits (123), Expect = 4e-06
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Frame = +3
Query: 207 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 386
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 387 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDV 566
+ I+ IDV T DGY +RV + FT T A+ +Q RAI K+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 567 TNSELREVVNKLI----PDSIAKDIEKA 638
+ E + + + +SI + I++A
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEA 170
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 52.0 bits (119), Expect = 1e-05
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 578
IE +DV T DGY LRV + FT + + KT +Q RAI M +I+ ++
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 579 ----LREVVNKLIPDSIAKDIEK 635
L+E V +P I K+ +K
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKK 179
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 50.4 bits (115), Expect = 4e-05
Identities = 38/131 (29%), Positives = 62/131 (47%)
Frame = +3
Query: 213 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 392
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 393 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTN 572
+ + +V T DGY LRV + FT R+ C + +Q AI K M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 573 SELREVVNKLI 605
S L E++ ++
Sbjct: 149 STLDELIQLMV 159
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 68 KKVLTKKIVDPFTRKDWYDVKAPSMFSKRQVGTT 169
KK KK++D F++KDWYDVKA +MF+ R +G T
Sbjct: 14 KKGAKKKVIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/95 (30%), Positives = 49/95 (51%)
Frame = +3
Query: 213 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 392
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 393 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 497
+ I A ++V+T DG+ +RV + T + KT
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 46.0 bits (104), Expect = 8e-04
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIXKKMCEIITRDVTNS 575
I +D+ T DG+ LRV + T Y H Q I K M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 576 ELREVVNKLIPDSIAKDI 629
E V ++I ++A +I
Sbjct: 158 TFDEFVQEMIFGNLANNI 175
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/91 (28%), Positives = 50/91 (54%)
Frame = +3
Query: 201 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 380
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 381 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 473
++++ I+ IDV T DGY++R+ + T K
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 44.0 bits (99), Expect = 0.003
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 494
+EA+I V TTD Y +RV + T K + SQ K
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/93 (26%), Positives = 49/93 (52%)
Frame = +3
Query: 216 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 395
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 396 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 494
+ +DVKT+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 43.6 bits (98), Expect = 0.004
Identities = 31/137 (22%), Positives = 62/137 (45%)
Frame = +3
Query: 219 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 398
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 578
+EA I V TTD Y +++ + T K A +Q +AI + M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 579 LREVVNKLIPDSIAKDI 629
++++ ++ ++ I
Sbjct: 151 FEQLIDSVVEGRLSSAI 167
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 41.5 bits (93), Expect = 0.017
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 207 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 386
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 387 WQTLIEANIDVKTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRD 563
+ +++ I V L+V FT +A+ +QV+ + KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 564 VTNSELREVVNKLIPDSIAKDIEKACHGI 650
++ V+ ++ ++K + C I
Sbjct: 152 AKEADFESFVSAMLKGELSKKMFAECKPI 180
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 39.5 bits (88), Expect = 0.068
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +3
Query: 213 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 392
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 393 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 494
+ I+A+ VKT D +++ + T + + S ++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQ 135
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 39.1 bits (87), Expect = 0.090
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = +3
Query: 222 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 398
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 399 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 578
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 579 LREVVNKLIPDSIAKDIEK 635
+ + D I I++
Sbjct: 178 IDFIYKICCSDVIGNSIKR 196
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 37.1 bits (82), Expect = 0.36
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 594 NKLIPDSIAKDIEKACHGI 650
NKLIPDSI KDIEKAC I
Sbjct: 1 NKLIPDSIGKDIEKACQSI 19
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 35.9 bits (79), Expect = 0.84
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = -1
Query: 412 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 233
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 232 SKTLPFNPSEAIFVALG-TVDKRGADLPLAE-HRRSLDIVPIF 110
++ + E +A G T+D+ A + L H+ + D + +F
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNLPRLHQYNDDKITLF 202
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 35.1 bits (77), Expect = 1.5
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = -1
Query: 463 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 290
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 289 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVALG 182
L + + SV + S R S L F P EA+++A+G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
>UniRef50_Q4UBI9 Cluster: Putative uncharacterized protein; n=3;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 3913
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = -2
Query: 159 TCL-LLNIDGALTSYQSLRVN-GSTIFFVNTFFTALRQALY 43
+CL + IDG LT ++ L N G I FVN FF+ ++QA+Y
Sbjct: 3099 SCLNVFLIDGVLTIFRCLDKNLGHCIDFVNLFFSKIKQAIY 3139
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 34.3 bits (75), Expect = 2.6
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +3
Query: 312 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 491
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 492 KTCYAQHTQVRAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 629
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -1
Query: 415 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 251
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 489 RKTCYAQHTQVRAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 635
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
>UniRef50_O50954 Cluster: Putative uncharacterized protein; n=3;
Borrelia burgdorferi group|Rep: Putative uncharacterized
protein - Borrelia burgdorferi (Lyme disease spirochete)
Length = 282
Score = 33.1 bits (72), Expect = 5.9
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +3
Query: 381 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR-KTCYAQHTQVRAIXKKMCEIIT 557
+K QT I + +K + +L V+ I TN L ++ + A+ ++R T
Sbjct: 87 EKLQTEIPSQFGLKNSMFELLNVYKIDSTNGTRLQEKMNSSLAESQKMRRQFYSSLSYNT 146
Query: 558 RDVTNSELREVVNKLIPDSIAKD-IEKACHGI 650
D+ N L E+VNKL D A D I+K GI
Sbjct: 147 TDIFN--LAEIVNKLYKDPKAHDTIKKISGGI 176
>UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR
family; n=4; Corynebacterium|Rep: Bacterial regulatory
proteins, tetR family - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 191
Score = 32.7 bits (71), Expect = 7.8
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +3
Query: 345 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR-VFCIGFTNKDSLSQRKTCYAQHTQV 521
+++ L W K Q LI+A T Y+L V + S+S ++TC A+ +
Sbjct: 37 LNVAPGALYWHFKNKQELIDA------TSRYLLAPVLGRNDEQRASISAQETC-AEMRSL 89
Query: 522 RAIXKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 632
K E+I+ ++N +LR+ + LI DS+ + E
Sbjct: 90 MMQTKDGAEVISAALSNQQLRQELESLISDSLKEPNE 126
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 346 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 471
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,583,946
Number of Sequences: 1657284
Number of extensions: 13431253
Number of successful extensions: 38104
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 36890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38082
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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