Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_C13
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   244   2e-66
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           28   0.29 
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        27   0.68 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    24   3.6  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  244 bits (597), Expect = 2e-66
 Identities = 124/205 (60%), Positives = 150/205 (73%)
 Frame = +3

Query: 27  MAVGKNKGPVEGXXXXXXXXXLSTHSLAKIGTMSRLRLCSARGKSAPRLSTVPXATKIAS 206
           MAVGKNKG  +G         +   +      +    +   R +S   L      TKIAS
Sbjct: 1   MAVGKNKGVSKGGKKGSKKKVVDPFTRKDWYDVKAPNMFKNR-QSGKTLVNRTQGTKIAS 59

Query: 207 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 386
           +GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV K
Sbjct: 60  DGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNK 119

Query: 387 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDV 566
           WQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ I  KM  II R++
Sbjct: 120 WQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREI 179

Query: 567 TNSELREVVNKLIPDSIAKDIEKAC 641
           T+++L+ VV KL+PDSIAKDIEKAC
Sbjct: 180 TSTDLKGVVEKLLPDSIAKDIEKAC 204


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 234 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 395
           V+LA+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 234 VSLADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 395
           V+LA+L A +D  E    ++  + + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 193 RKLLRKD*REEFSKFPWLIYKLTLTRKGLSAN 288
           ++ + +D R E+ +FPW++    L  +    N
Sbjct: 332 QRTINEDFRAEYGEFPWMVALFQLPEQRYCCN 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,993
Number of Sequences: 2352
Number of extensions: 14588
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)