Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C12
(510 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 198 2e-51
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 198 2e-51
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 191 3e-49
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 57 9e-09
10_05_0003 - 7715935-7716336,7716360-7716890 31 0.54
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 31 0.71
03_05_0291 - 22837412-22838128 29 1.6
01_01_0098 + 744582-745380,746107-746130,746500-747569 29 2.2
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 2.9
02_02_0500 - 10993675-10994067,10994434-10995738 29 2.9
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 28 3.8
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 28 5.0
11_06_0538 + 24759030-24759379,24759380-24759488,24759604-247596... 27 6.6
12_02_0915 - 24252495-24253079,24253560-24254759,24255234-242553... 27 8.8
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 27 8.8
03_05_0446 - 24414351-24414427,24414491-24414881 27 8.8
02_04_0290 - 21627733-21628353,21628424-21628663,21628874-216292... 27 8.8
02_02_0607 - 12088810-12089105,12089200-12090208 27 8.8
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 198 bits (484), Expect = 2e-51
Identities = 94/132 (71%), Positives = 112/132 (84%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGSAG KFR+SLGLP ++ A+ + + S+ K IKGRLNRLP+A GD
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITG
Sbjct: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITG 119
Query: 398 PVAKECADLWPR 433
P+ KECADLWPR
Sbjct: 120 PIGKECADLWPR 131
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 198 bits (484), Expect = 2e-51
Identities = 94/132 (71%), Positives = 112/132 (84%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGSAG KFR+SLGLP ++ A+ + + S+ K IKGRLNRLP+A GD
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITG
Sbjct: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITG 119
Query: 398 PVAKECADLWPR 433
P+ KECADLWPR
Sbjct: 120 PIGKECADLWPR 131
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 191 bits (465), Expect = 3e-49
Identities = 90/128 (70%), Positives = 108/128 (84%)
Frame = +2
Query: 50 GRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGDMIVA 229
GRGGSAG KFR+SLGLP ++ A+ + + S+ K IKGRLNRLP+A GDM++A
Sbjct: 22 GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISV-KGIKGRLNRLPSACVGDMVMA 80
Query: 230 TVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAK 409
TVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ K
Sbjct: 81 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGK 140
Query: 410 ECADLWPR 433
ECADLWPR
Sbjct: 141 ECADLWPR 148
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 56.8 bits (131), Expect = 9e-09
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +2
Query: 212 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKG 382
GD I+ +VK+ +P + K V+ VV+R R DG I F+DNA V+VNNKGE+ G
Sbjct: 84 GDTIIGSVKEAQPRGKVKKGDVVYGVVVRAAMKRGRNDGSEIQFDDNAIVLVNNKGELIG 143
Query: 383 SAITGPVAKE 412
+ + GPV E
Sbjct: 144 TRVFGPVPHE 153
>10_05_0003 - 7715935-7716336,7716360-7716890
Length = 310
Score = 31.1 bits (67), Expect = 0.54
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Frame = +2
Query: 47 RGRGGSAGAKFRISLGLPA---GSSNQLRRQHRAQRICM*SLSKAIKGRLNRL-PAAGSG 214
R RGG G++ + +LGL A SS Q R +L A+ GR +L +A
Sbjct: 93 RPRGGGGGSRIKNALGLKARRLSSSAVAATQPMMVRTLSQTLGPALPGRGRQLMTSAEIM 152
Query: 215 DMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDG 319
+ ++ LR+ +M A+V Q KP DG
Sbjct: 153 RQQIRVTEQNNARLRRTLMRAIV-GQLKPVEFPDG 186
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 30.7 bits (66), Expect = 0.71
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 64 RGSEIPYLPGSPSWEQ*STAPTTQGAKN 147
RG+ +P L +PSWE+ S APT + K+
Sbjct: 569 RGAAVPTLKMNPSWEKPSVAPTLELRKS 596
>03_05_0291 - 22837412-22838128
Length = 238
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -1
Query: 447 AFEAIRGHRSAHSLATGPVMAEPFI--SPLLLTMTPALSS 334
+++A+ GH+++H T P MA + P T +PA SS
Sbjct: 100 SYQALGGHKTSHRPRTPPTMAAVVVVDEPAATTASPAASS 139
>01_01_0098 + 744582-745380,746107-746130,746500-747569
Length = 630
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 227 PQSCPRNRPPAVCSGDL**PWTAITYRFFAPCVVGAVDY 111
P SC + +CSG T + + F PC V A+DY
Sbjct: 60 PSSCGSSHAKLICSGQD----TILHHPFLGPCKVTAIDY 94
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 352 DTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEFRFTLFDCGHNHV 215
+ I+++ Y+ T +R P P D + +F F L+DC +N V
Sbjct: 101 EINIIIEAYR---TLRDRGPYPADQVVRDINGKFAFVLYDCSNNSV 143
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 396 PVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTT---AGITFFR-SSGLPFLTV 229
P EP I+ + ++PA+ +T S + NG+ +M+T G+ F + SSG + V
Sbjct: 225 PAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAV 284
Query: 228 ATIMSPEPAA 199
+ EP A
Sbjct: 285 FKPIDEEPMA 294
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 335 EDNAGVIV--NNKGEMKGSAITGPVAKECAD 421
ED +I+ N+KG +GS ITG + + CA+
Sbjct: 715 EDGDKIIMSSNDKGSNQGSFITGKIVESCAE 745
>06_03_0025 -
15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 307 SERFPLPDDHCRHYLFPEFRFTLFDCGHNHVPGTGRRQS 191
S R PLP+D C Y+ ++R + H+ G R S
Sbjct: 25 SSRVPLPEDTCDSYVEQKYRCYIRTLKGCHISGRNRLDS 63
>11_06_0538 +
24759030-24759379,24759380-24759488,24759604-24759692,
24760179-24760287,24760370-24760471,24760564-24760628,
24760830-24760936,24761023-24761087,24761163-24761217,
24761305-24761465
Length = 403
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -1
Query: 363 LLTMTPALSSKY-INTPSRLLNGFRCLMTT--AGITFFRSSGLPFLTVATIMSPEPAAGS 193
LLT P + + SRL R L AG+ FF S+ + + I+ P P++
Sbjct: 37 LLTQRPCVEGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYYYAPLLILPPPPSSFP 96
Query: 192 LFR 184
LF+
Sbjct: 97 LFQ 99
>12_02_0915 -
24252495-24253079,24253560-24254759,24255234-24255303,
24257127-24257188
Length = 638
Score = 27.1 bits (57), Expect = 8.8
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +3
Query: 45 REDVVVPRERNSVSPWVSQLGAVINCADNTGRKESV 152
++ ++V + S+ PW L + +C D+ K S+
Sbjct: 138 KDSIIVLQTTKSLLPWSENLKVINHCVDSIATKASI 173
>05_01_0029 +
187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 296 KPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKEC-ADLWP 430
KP D V + DN GV+V+ G GS+ +C A+++P
Sbjct: 214 KPLSGGDEVMLLV-DNVGVVVDRSGHPVGSSFVFNTTPDCIAEVYP 258
>03_05_0446 - 24414351-24414427,24414491-24414881
Length = 155
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 85 DTEFRSRGTTTSSLRHFVVSKILKEIIG 2
D FR+RG T++SLR V+ ++ I+G
Sbjct: 66 DRGFRARGFTSASLRSNVIEGEVRSILG 93
>02_04_0290 -
21627733-21628353,21628424-21628663,21628874-21629214,
21630934-21631612,21631893-21631962,21632063-21632190
Length = 692
Score = 27.1 bits (57), Expect = 8.8
Identities = 23/88 (26%), Positives = 35/88 (39%)
Frame = +3
Query: 45 REDVVVPRERNSVSPWVSQLGAVINCADNTGRKESVCDRCPRLSKVA*TDCRRPVPGT*L 224
R+ + V + ++SPW L V C+++ K C PR + A T G
Sbjct: 169 RDSIAVLKSCEALSPWAENLQIVRRCSESIAWK--ACAN-PRGVRWAYTGAGAGSGGARG 225
Query: 225 WPQSKRVNLNSGKR*CRQWSSGSGNRSE 308
P + R SG +W+ G G E
Sbjct: 226 GPAAIRGGGGSGGTASPRWNVGGGGGGE 253
>02_02_0607 - 12088810-12089105,12089200-12090208
Length = 434
Score = 27.1 bits (57), Expect = 8.8
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 432 RGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYIN---TPSRLL-NGFRCLMTTAGIT 265
RG +A + V A+ F + + L + P +S + PS+L NG+R L A +
Sbjct: 150 RGGGAAAAAVPICVYAQAFAAGMRLPLHPFVSDALAHFGIAPSQLAPNGWRVLAGFAVLC 209
Query: 264 FFRSSGLPFLTV 229
FR G P L V
Sbjct: 210 HFRGVGAPSLPV 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,332,498
Number of Sequences: 37544
Number of extensions: 326489
Number of successful extensions: 1011
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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