Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C12
(510 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 211 1e-54
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 210 2e-54
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 210 2e-54
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 210 2e-54
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 210 2e-54
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 210 2e-54
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 210 2e-54
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 198 7e-51
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 101 2e-21
BC103925-1|AAI03926.1| 523|Homo sapiens UDP glycosyltransferase... 35 0.19
BC103924-1|AAI03925.1| 523|Homo sapiens UDP glycosyltransferase... 35 0.19
AY358416-1|AAQ88782.1| 523|Homo sapiens glucuronosyltransferase... 35 0.19
AK075383-1|BAC11583.1| 523|Homo sapiens protein ( Homo sapiens ... 35 0.19
AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1... 29 7.1
AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein pr... 29 7.1
AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr... 29 7.1
AK131400-1|BAD18547.1| 852|Homo sapiens protein ( Homo sapiens ... 29 7.1
AK128850-1|BAC87646.1| 673|Homo sapiens protein ( Homo sapiens ... 29 7.1
AJ313524-1|CAC86408.1| 852|Homo sapiens putative binding protei... 29 7.1
AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein. 29 7.1
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 211 bits (515), Expect = 1e-54
Identities = 103/132 (78%), Positives = 114/132 (86%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGS+GAKFRISLGLP G+ A+ + + S+ K IKGRLNRLPAAG GD
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITG
Sbjct: 60 MVMATVKKGKPELRKKVRPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITG 119
Query: 398 PVAKECADLWPR 433
PVAKECADLWPR
Sbjct: 120 PVAKECADLWPR 131
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 210 bits (514), Expect = 2e-54
Identities = 103/132 (78%), Positives = 114/132 (86%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGS+GAKFRISLGLP G+ A+ + + S+ K IKGRLNRLPAAG GD
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITG
Sbjct: 60 MVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITG 119
Query: 398 PVAKECADLWPR 433
PVAKECADLWPR
Sbjct: 120 PVAKECADLWPR 131
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 210 bits (514), Expect = 2e-54
Identities = 103/132 (78%), Positives = 114/132 (86%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGS+GAKFRISLGLP G+ A+ + + S+ K IKGRLNRLPAAG GD
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITG
Sbjct: 60 MVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITG 119
Query: 398 PVAKECADLWPR 433
PVAKECADLWPR
Sbjct: 120 PVAKECADLWPR 131
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 210 bits (514), Expect = 2e-54
Identities = 103/132 (78%), Positives = 114/132 (86%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGS+GAKFRISLGLP G+ A+ + + S+ K IKGRLNRLPAAG GD
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITG
Sbjct: 60 MVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITG 119
Query: 398 PVAKECADLWPR 433
PVAKECADLWPR
Sbjct: 120 PVAKECADLWPR 131
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 210 bits (514), Expect = 2e-54
Identities = 103/132 (78%), Positives = 114/132 (86%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGS+GAKFRISLGLP G+ A+ + + S+ K IKGRLNRLPAAG GD
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITG
Sbjct: 60 MVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITG 119
Query: 398 PVAKECADLWPR 433
PVAKECADLWPR
Sbjct: 120 PVAKECADLWPR 131
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 210 bits (514), Expect = 2e-54
Identities = 103/132 (78%), Positives = 114/132 (86%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGS+GAKFRISLGLP G+ A+ + + S+ K IKGRLNRLPAAG GD
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITG
Sbjct: 60 MVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITG 119
Query: 398 PVAKECADLWPR 433
PVAKECADLWPR
Sbjct: 120 PVAKECADLWPR 131
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 210 bits (514), Expect = 2e-54
Identities = 103/132 (78%), Positives = 114/132 (86%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGS+GAKFRISLGLP G+ A+ + + S+ K IKGRLNRLPAAG GD
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGD 59
Query: 218 MIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITG 397
M++ATVKKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITG
Sbjct: 60 MVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITG 119
Query: 398 PVAKECADLWPR 433
PVAKECADLWPR
Sbjct: 120 PVAKECADLWPR 131
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 198 bits (484), Expect = 7e-51
Identities = 97/126 (76%), Positives = 108/126 (85%)
Frame = +2
Query: 56 GGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGDMIVATV 235
GGS+GAKFRISLGLP G+ A+ + + S+ K IKGRLNRLPAAG GDM++ATV
Sbjct: 1 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGDMVMATV 59
Query: 236 KKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKEC 415
KKGKPELRKKV PAVVIRQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKEC
Sbjct: 60 KKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKEC 119
Query: 416 ADLWPR 433
ADLWPR
Sbjct: 120 ADLWPR 125
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 101 bits (241), Expect = 2e-21
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = +2
Query: 38 MSKRGRGGSAGAKFRISLGLPAGSSNQLRRQHRAQRICM*SLSKAIKGRLNRLPAAGSGD 217
MSKRGRGGS+GAKFRISLGLP G+ A+ + + S+ K IKGRLNRLPAAG GD
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISV-KGIKGRLNRLPAAGVGD 59
Query: 218 MIVATVKKGKPELRKK 265
M++ATVKKGKPELRKK
Sbjct: 60 MVMATVKKGKPELRKK 75
>BC103925-1|AAI03926.1| 523|Homo sapiens UDP glycosyltransferase 3
family, polypeptide A2 protein.
Length = 523
Score = 34.7 bits (76), Expect = 0.19
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 202 RRQSVQATFDSLGQRSHTDSLRPVLSAQLITAPSWETQGDTEF 74
R+Q +Q+TFD+ + T+ RPVLS L+ A W D F
Sbjct: 213 RQQHMQSTFDNTIKEHFTEGSRPVLSHLLLKAELWFINSDFAF 255
>BC103924-1|AAI03925.1| 523|Homo sapiens UDP glycosyltransferase 3
family, polypeptide A2 protein.
Length = 523
Score = 34.7 bits (76), Expect = 0.19
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 202 RRQSVQATFDSLGQRSHTDSLRPVLSAQLITAPSWETQGDTEF 74
R+Q +Q+TFD+ + T+ RPVLS L+ A W D F
Sbjct: 213 RQQHMQSTFDNTIKEHFTEGSRPVLSHLLLKAELWFINSDFAF 255
>AY358416-1|AAQ88782.1| 523|Homo sapiens glucuronosyltransferase
protein.
Length = 523
Score = 34.7 bits (76), Expect = 0.19
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 202 RRQSVQATFDSLGQRSHTDSLRPVLSAQLITAPSWETQGDTEF 74
R+Q +Q+TFD+ + T+ RPVLS L+ A W D F
Sbjct: 213 RQQHMQSTFDNTIKEHFTEGSRPVLSHLLLKAELWFINSDFAF 255
>AK075383-1|BAC11583.1| 523|Homo sapiens protein ( Homo sapiens
cDNA PSEC0073 fis, clone NT2RP2002934, weakly similar to
UDP-GLUCURONOSYLTRANSFERASE 2C1 MICROSOMAL (EC
2.4.1.17). ).
Length = 523
Score = 34.7 bits (76), Expect = 0.19
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 202 RRQSVQATFDSLGQRSHTDSLRPVLSAQLITAPSWETQGDTEF 74
R+Q +Q+TFD+ + T+ RPVLS L+ A W D F
Sbjct: 213 RQQHMQSTFDNTIKEHFTEGSRPVLSHLLLKAELWFINSDFAF 255
>AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1
protein.
Length = 1906
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 432 RGHRSAHSLATGPVMAEPFISPLLLTMTP 346
+G AH L+ GP+ P++ P LL +TP
Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477
>AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein
protein.
Length = 568
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 432 RGHRSAHSLATGPVMAEPFISPLLLTMTP 346
+G AH L+ GP+ P++ P LL +TP
Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139
>AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein
protein.
Length = 1285
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 432 RGHRSAHSLATGPVMAEPFISPLLLTMTP 346
+G AH L+ GP+ P++ P LL +TP
Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856
>AK131400-1|BAD18547.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ16493 fis, clone CTONG3004550, weakly similar
to Homo sapiens SH3-domain binding protein 4 (SH3BP4).
).
Length = 852
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 268 YLFPEFRFTLFDCGHNHVPG 209
Y+ P F L CGHN++PG
Sbjct: 379 YIHPNFTVVLTVCGHNYMPG 398
>AK128850-1|BAC87646.1| 673|Homo sapiens protein ( Homo sapiens
cDNA FLJ46632 fis, clone TRACH2024730, weakly similar
to Homo sapiens SH3-domain binding protein 4 (SH3BP4).
).
Length = 673
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 268 YLFPEFRFTLFDCGHNHVPG 209
Y+ P F L CGHN++PG
Sbjct: 200 YIHPSFTVVLTVCGHNYMPG 219
>AJ313524-1|CAC86408.1| 852|Homo sapiens putative binding protein
7a5 protein.
Length = 852
Score = 29.5 bits (63), Expect = 7.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 268 YLFPEFRFTLFDCGHNHVPG 209
Y+ P F L CGHN++PG
Sbjct: 379 YIHPSFTVVLTVCGHNYMPG 398
>AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.
Length = 1644
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 432 RGHRSAHSLATGPVMAEPFISPLLLTMTP 346
+G AH L+ GP+ P++ P LL +TP
Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,550,631
Number of Sequences: 237096
Number of extensions: 1676043
Number of successful extensions: 5194
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5167
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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