Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_C10
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    27   0.18 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.7  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.9  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 358 RCVPNRRSMGEKRHRPSSQHTVCPRS*DLQTRGMER 465
           +C P+   +  KRH P + HT C +  + Q  G ++
Sbjct: 55  KCTPDGAEL--KRHLPDALHTECSKCSETQKNGSKK 88


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +2

Query: 203 MSSRHGTVLCQLINKLKPGSVPK---INTTGGQFKMM 304
           M++ +  ++  L+N +KP  VP    + T  GQ  M+
Sbjct: 312 MNTTNHAIVQSLVNSMKPKEVPGPCCVPTQLGQMSML 348


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 167 RGRPQSTLGLPSPSQGCAWK 108
           +G P + L L  P+ G AWK
Sbjct: 278 KGAPNNKLILGIPAYGRAWK 297


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 86  VPETCCVSCVSAFS 45
           VP  CC  CV+A S
Sbjct: 724 VPGECCAICVNATS 737


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 87  RSRDMLCELCECFFRV 40
           RS D LC++C+   R+
Sbjct: 518 RSHDKLCDVCDSVNRI 533


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 427 GKQCADYLGDVFFL 386
           GK C  Y+ D+F+L
Sbjct: 196 GKNCVTYVFDLFYL 209


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 577 HSIRTEPWRRPQDLDRQVNTTPA 645
           H  R EP R   ++DR   T PA
Sbjct: 323 HQRRNEPKRPRPNIDRHEVTRPA 345


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 515 DEVLKAGQTVIGLQAGSNK 571
           DE+   GQT++G+     K
Sbjct: 280 DEICNEGQTILGISYSLEK 298


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 515 DEVLKAGQTVIGLQAGSNK 571
           DE+   GQT++G+     K
Sbjct: 280 DEICNEGQTILGISYSLEK 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,752
Number of Sequences: 336
Number of extensions: 3724
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)