Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C10
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 120 9e-28
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 120 9e-28
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 87 1e-17
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 66 2e-11
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 62 4e-10
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 36 0.025
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 30 1.2
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 30 1.2
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 30 1.2
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 30 1.2
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 30 1.2
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 30 1.2
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 30 1.2
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 30 1.2
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 30 1.6
U58754-4|AAX22292.1| 332|Caenorhabditis elegans Serpentine rece... 29 2.2
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z83219-8|CAD57688.1| 455|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z80217-11|CAD57698.1| 455|Caenorhabditis elegans Hypothetical p... 28 5.0
Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical p... 28 5.0
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 28 5.0
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 28 5.0
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 120 bits (289), Expect = 9e-28
Identities = 74/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Frame = +2
Query: 56 SHNSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLAS*IPPW--LNYLRMSSRHGTVL 229
S + + + + KI K + E +W++ V + L + G++L
Sbjct: 7 SDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLL 66
Query: 230 CQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 409
C L N LKPGSV K+NT+ FK MENI+ F + Y V ++FQTVDL+E +D V
Sbjct: 67 CTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAV 125
Query: 410 VSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSG 589
+ L +L R++ ++ SG LGPK A +R+++DE LKAG VIGLQ GSNKGAT SG
Sbjct: 126 LICLASLARKSEKNFGRSG--LGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASG 183
Query: 590 QNLGAGR 610
N+G R
Sbjct: 184 LNMGNTR 190
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 120 bits (289), Expect = 9e-28
Identities = 74/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Frame = +2
Query: 56 SHNSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLAS*IPPW--LNYLRMSSRHGTVL 229
S + + + + KI K + E +W++ V + L + G++L
Sbjct: 7 SDRAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLL 66
Query: 230 CQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 409
C L N LKPGSV K+NT+ FK MENI+ F + Y V ++FQTVDL+E +D V
Sbjct: 67 CTLANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAV 125
Query: 410 VSTLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSG 589
+ L +L R++ ++ SG LGPK A +R+++DE LKAG VIGLQ GSNKGAT SG
Sbjct: 126 LICLASLARKSEKNFGRSG--LGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASG 183
Query: 590 QNLGAGR 610
N+G R
Sbjct: 184 LNMGNTR 190
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 86.6 bits (205), Expect = 1e-17
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 9/196 (4%)
Frame = +2
Query: 56 SHNSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLAS*IPPWLNYLRMSS------RH 217
+++ + L R+++ K ++ E+ E +WIE V + S+ +
Sbjct: 2 ANHGPSYGLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKD 61
Query: 218 GTVLCQLINKLKPGSVPKINTTGGQ-FKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKK 394
G +LC+LI KL P N F MMENI+NF +A K +GV +I FQTVDL+E K
Sbjct: 62 GVMLCKLIEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENK 121
Query: 395 DIAQVVSTLFALGRETY-RHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNK 571
+V+ L L R + P K A R F + V++ G+ VI LQ G+NK
Sbjct: 122 QCYKVIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNK 181
Query: 572 GATQSGQN-LGAGRKI 616
A+Q G + G R+I
Sbjct: 182 CASQKGMSPYGLPRQI 197
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 66.1 bits (154), Expect = 2e-11
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Frame = +2
Query: 59 HNSHNMSLERQVRAKIASKRNPEKEKEAQEWIEGVLAS*IP--PWLNYLRMSSRHGTVLC 232
H + + K ASK N + EWI + + R + G LC
Sbjct: 6 HRPRPAGMAGAILDKQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLC 65
Query: 233 QLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVV 412
+L+N +K GSV KI F +ENI F +A ++ GV D + FQ+VDL++ +D+ V
Sbjct: 66 KLVNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVT 125
Query: 413 STLFALGRE 439
TL +L R+
Sbjct: 126 VTLQSLARK 134
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +2
Query: 212 RHGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEK 391
+ GT+LC+ N ++ GS+ K+ F MENI F K GVP+ + FQ+V+L E
Sbjct: 56 KDGTLLCKAANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEG 115
Query: 392 KDIAQVVSTLFALGR 436
+D+ V TL +LGR
Sbjct: 116 RDLFSVCVTLLSLGR 130
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 218 GTVLCQLINKLKPGSVPKINTTGGQF---KMMENITNFQSAIKAYGVPDIDVFQTVDLWE 388
G LC+ INKL P S+ ++T + N+ F + GVP+ + +D+
Sbjct: 551 GQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMDIIS 610
Query: 389 KKDIAQVVSTLFALGR 436
K++ +V T+ + +
Sbjct: 611 KRNPQKVARTVLTVAK 626
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 416 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 592
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 93 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 146
Query: 593 NLGAGRK 613
G GR+
Sbjct: 147 GFGTGRR 153
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 518 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 616
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 300 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 333
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 416 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 592
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 301 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 354
Query: 593 NLGAGRK 613
G GR+
Sbjct: 355 GFGTGRR 361
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 518 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 616
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 508 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 541
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 416 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 592
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 110 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 163
Query: 593 NLGAGRK 613
G GR+
Sbjct: 164 GFGTGRR 170
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 518 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 616
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 317 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 416 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 592
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 93 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 146
Query: 593 NLGAGRK 613
G GR+
Sbjct: 147 GFGTGRR 153
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 518 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 616
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 300 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 333
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 416 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 592
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 110 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 163
Query: 593 NLGAGRK 613
G GR+
Sbjct: 164 GFGTGRR 170
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 518 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 616
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 317 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 416 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 592
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 280 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 333
Query: 593 NLGAGRK 613
G GR+
Sbjct: 334 GFGTGRR 340
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 518 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 616
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 487 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 520
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 416 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 592
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 301 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 354
Query: 593 NLGAGRK 613
G GR+
Sbjct: 355 GFGTGRR 361
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 518 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 616
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 508 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 541
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 416 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 592
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 110 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 163
Query: 593 NLGAGRK 613
G GR+
Sbjct: 164 GFGTGRR 170
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 518 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 616
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 317 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
protein F09C3.1 protein.
Length = 1391
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Frame = +2
Query: 197 LRMSSRHGTVLCQLINKLKPGSVP------------KINTTGGQFKMMENITNFQSAIKA 340
L + R+G +L +L N P VP + N ++ +NI ++ A+++
Sbjct: 70 LEENLRNGVLLARLGNSFAPEVVPEKGIFDIRQEKYRQNDATPVYRHSDNIMQWRRAMES 129
Query: 341 YGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYR 448
+P+I + +T D++E +++ + V LFAL +R
Sbjct: 130 VRLPEIFIPETADVFEGRNM-KTVFCLFALATLLHR 164
>U58754-4|AAX22292.1| 332|Caenorhabditis elegans Serpentine
receptor, class sx protein15 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 409 YLGDVFFLP*IYGLEHIDVGYTICFNCRLEVCD 311
YL +FFLP IYG+ + G+ N L +C+
Sbjct: 129 YLSILFFLPVIYGVISVIFGFIFLDNAVLSMCN 161
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 518 EVLKAGQTVIGLQAGSNKGATQSG 589
E LK G T + QAG+NK TQ G
Sbjct: 20 EQLKGGNTFLSQQAGTNKFETQKG 43
>Z83219-8|CAD57688.1| 455|Caenorhabditis elegans Hypothetical
protein C31C9.1b protein.
Length = 455
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 408 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 322
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 408 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 322
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 95 RAKIASKRNPEKEKEAQEWIE 157
RAK+ K+ PEKEKEA +I+
Sbjct: 103 RAKMVYKKKPEKEKEAVPFID 123
>Z80217-11|CAD57698.1| 455|Caenorhabditis elegans Hypothetical
protein C31C9.1b protein.
Length = 455
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 408 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 322
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical
protein C31C9.1a protein.
Length = 473
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -1
Query: 408 TWAMSFFSHRSTVWNTSMSGTPYAL---IADW 322
++AM + + VW +S +GT Y L IADW
Sbjct: 378 SFAMQSYDGKKLVWGSSRNGTMYELNLFIADW 409
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 230 KEQCRALRTSSNSSAR--GEFSSRGRPQSTLGLPSPSQG-CAWKR 105
KE+ LR S++R GE+ +RGRP++ G G W R
Sbjct: 672 KEKLAVLRQRGRSASREAGEWRARGRPRAVFGRKGAKDGELNWPR 716
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 230 KEQCRALRTSSNSSAR--GEFSSRGRPQSTLGLPSPSQG-CAWKR 105
KE+ LR S++R GE+ +RGRP++ G G W R
Sbjct: 672 KEKLAVLRQRGRSASREAGEWRARGRPRAVFGRKGAKDGELNWPR 716
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,801,504
Number of Sequences: 27780
Number of extensions: 364111
Number of successful extensions: 1131
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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