Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C08
(555 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 200 1e-50
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 167 2e-40
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 139 3e-32
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 130 3e-29
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 126 5e-28
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 117 2e-25
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 116 3e-25
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 116 4e-25
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 113 2e-24
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 111 1e-23
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 108 7e-23
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 95 1e-18
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 95 1e-18
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 93 4e-18
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 91 1e-17
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 89 6e-17
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 86 5e-16
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 84 2e-15
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 79 5e-14
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 75 1e-12
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 74 2e-12
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 73 3e-12
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 73 3e-12
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 72 8e-12
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 72 1e-11
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 69 1e-10
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 68 1e-10
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 66 4e-10
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 65 9e-10
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 63 4e-09
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 57 2e-07
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 57 3e-07
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 56 6e-07
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 54 3e-06
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 49 8e-05
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 40 0.029
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.12
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 37 0.27
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.27
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.48
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 36 0.48
UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat pr... 35 1.1
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 35 1.5
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.5
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 34 1.9
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 1.9
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 34 2.6
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 33 3.4
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 3.4
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 4.5
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 5.9
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 5.9
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 33 5.9
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 7.8
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 200 bits (489), Expect = 1e-50
Identities = 94/112 (83%), Positives = 102/112 (91%)
Frame = +3
Query: 213 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 392
KVEKWFG+KKELAAVRTVCSH+ NMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 393 NFLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
NFLG KYI RV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTV
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTV 165
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 208
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRT 52
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 167 bits (406), Expect = 2e-40
Identities = 78/112 (69%), Positives = 93/112 (83%)
Frame = +3
Query: 213 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 392
+V+KW+G++KELA VRT+CSHV NMIKGVT GF+YKMR+VYAHFPIN V E S++EIR
Sbjct: 56 RVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIR 115
Query: 393 NFLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
NFLG KYI RV+M PGV S QKDELI+EGN +E VS+SAALIQQ+TTV
Sbjct: 116 NFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTV 167
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR 205
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ +
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK 51
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 139 bits (337), Expect = 3e-32
Identities = 64/112 (57%), Positives = 83/112 (74%)
Frame = +3
Query: 213 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 392
+V+ WFG+++ +AA+RT SHV N+I GVTKG++YKMR VYAHFPIN T N+ IEIR
Sbjct: 55 QVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIR 114
Query: 393 NFLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
NFLG K + +V M GVT++ S K KDEL+++GN +E VS SAALI Q V
Sbjct: 115 NFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHV 166
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 196
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL 48
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 130 bits (313), Expect = 3e-29
Identities = 54/111 (48%), Positives = 80/111 (72%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
V+ WFG++K++A ++T+ S + NMI GVTKG++YKMR VYAHFPIN T+G ++EIRN
Sbjct: 73 VDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRN 132
Query: 396 FLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
F G K + R+++ G+T + K KDE+++ GNSLE +S S A IQ + +
Sbjct: 133 FFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAI 183
Score = 41.1 bits (92), Expect = 0.017
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 98 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR 205
+TV VK R V V GPRG L ++F H +VDI +V +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKK 69
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 126 bits (303), Expect = 5e-28
Identities = 62/108 (57%), Positives = 77/108 (71%)
Frame = +3
Query: 225 WFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 404
W GS+K A +R+V S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLG
Sbjct: 58 WHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLG 117
Query: 405 XKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
+ +K PGVTV S KDE+I+EGNSLE+VS SAA I+Q V
Sbjct: 118 ERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNV 165
Score = 48.8 bits (111), Expect = 8e-05
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = +2
Query: 56 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIR 190
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMK 47
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 117 bits (282), Expect = 2e-25
Identities = 57/111 (51%), Positives = 69/111 (62%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
V WF K A RT+CSH+ NM KGVT GF+YKMR YAHFPI + N IEIRN
Sbjct: 53 VAVWFPRGKRNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRN 112
Query: 396 FLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
F+ R++ PGVT+ S KDELI+ G S+EDVS +AA I +S V
Sbjct: 113 FMHQIKTRRIECLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLKV 163
Score = 39.9 bits (89), Expect = 0.039
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 62 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVN 199
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAN 48
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 116 bits (280), Expect = 3e-25
Identities = 55/108 (50%), Positives = 70/108 (64%)
Frame = +3
Query: 225 WFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 404
W +K A +RT + V NMIKGVT GFQYKMRAVYAHFPIN + EIRNFLG
Sbjct: 120 WHAGRKHAACLRTAQACVANMIKGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLG 179
Query: 405 XKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
K + + M GVT+ QKD++++EGN ++ VS SAAL+ +T V
Sbjct: 180 EKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDIDLVSQSAALLHGATLV 227
Score = 33.9 bits (74), Expect = 2.6
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 163
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 116 bits (279), Expect = 4e-25
Identities = 61/110 (55%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Frame = +3
Query: 213 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINC--VTTEGNSIIE 386
KV G +K +AA+RTV S V NMI GVTKG++YKMR VYAHFPIN V +G IE
Sbjct: 54 KVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIE 113
Query: 387 IRNFLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 536
+RNFLG K I V + GVT+ S KDE+++ GNS+EDVS +AA +QQ
Sbjct: 114 VRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQ 163
Score = 56.8 bits (131), Expect = 3e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVN 199
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVN 49
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 113 bits (273), Expect = 2e-24
Identities = 52/111 (46%), Positives = 73/111 (65%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
++ W+G++++ A VRT+ SH+ NMI GVTKG+QYKMR VYAHFP+ V + I+++N
Sbjct: 65 IDMWYGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQN 124
Query: 396 FLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
FLG K ++M GV V KDE+ +EGN +E VS SAA I + V
Sbjct: 125 FLGEKRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLV 173
Score = 39.1 bits (87), Expect = 0.068
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 74 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 187
+ V IP+G+ + + + + V GPRG L R F+H VDI
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDI 46
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 111 bits (266), Expect = 1e-23
Identities = 47/73 (64%), Positives = 58/73 (79%)
Frame = +3
Query: 213 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 392
+V KWFG +KE+AA+RTVCSH+ NMIKGVTKGF+YKMR+VYAHFPIN +G +EIR
Sbjct: 54 RVRKWFGVRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIR 113
Query: 393 NFLGXKYIXRVKM 431
NFLG K + V +
Sbjct: 114 NFLGEKIVRPVPL 126
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 196
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERV 48
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 108 bits (260), Expect = 7e-23
Identities = 50/105 (47%), Positives = 70/105 (66%)
Frame = +3
Query: 225 WFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 404
W KK+LA + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLG
Sbjct: 59 WMAGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLG 118
Query: 405 XKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQS 539
K I ++ M GV + + +KDE+ + G+ L VS +AA IQQS
Sbjct: 119 EKRIRKIYMGQGVKIKKNEAKKDEISVFGSDLNLVSLNAASIQQS 163
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 95.1 bits (226), Expect = 1e-18
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
V W +K+ V +V S + NMI+GVT G+++KM YAHFPI +EI+N
Sbjct: 64 VRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKN 123
Query: 396 FLGXKYIXRVKMAPGVTVV-NSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
FLG K I +K PGVT+ N ++K+ L ++GN L +VS + ALI Q+ V
Sbjct: 124 FLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAV 175
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 193
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQV 47
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 95.1 bits (226), Expect = 1e-18
Identities = 50/111 (45%), Positives = 73/111 (65%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
+ K F +K++A RT +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I N
Sbjct: 55 IYKDFPRRKDVAIARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IEN 112
Query: 396 FLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
FLG K + K+ PGVTV + E+I+EG E V +AA I+Q+T +
Sbjct: 113 FLGEKAPRKAKILPGVTV---KVRGQEIIVEGIDKEAVGQTAANIEQATRI 160
Score = 35.1 bits (77), Expect = 1.1
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 74 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 166
++V+IP+G+ V V+ V VKGP+G L+R F
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREF 39
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 93.1 bits (221), Expect = 4e-18
Identities = 49/111 (44%), Positives = 73/111 (65%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
+ K F KK++A VRT +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I N
Sbjct: 55 IYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IEN 112
Query: 396 FLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
FLG K R K+ PGVTV + E+ +EG E V +AA I+Q+T +
Sbjct: 113 FLGEKNPRRAKILPGVTV---KVKGSEIEVEGIDKEAVGQTAANIEQATRI 160
Score = 38.3 bits (85), Expect = 0.12
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 74 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 187
++++IP+G+ V V+ V VKGP+G L+R K+ V I
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQI 46
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 91.5 bits (217), Expect = 1e-17
Identities = 54/103 (52%), Positives = 65/103 (63%)
Frame = +3
Query: 240 KELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYIX 419
KELA VRT+CSHV NMIKGV+ GF+YK+R+VYAHFP+N
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNV--------------------- 68
Query: 420 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
V+M GV S QKDELI+EGN E VS+SAALIQ++T V
Sbjct: 69 -VQMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAV 110
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 89.0 bits (211), Expect = 6e-17
Identities = 47/106 (44%), Positives = 62/106 (58%)
Frame = +3
Query: 213 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 392
++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 393 NFLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALI 530
NFLG K + R +M G V ++KD ++IEG SL DVS SA I
Sbjct: 133 NFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTI 177
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 86.2 bits (204), Expect = 5e-16
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
VE WFG K A +RTVCSH+ NMI GV + +QYK+R VYAHFPIN T S IEIRN
Sbjct: 118 VEMWFGLTKNKACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRN 177
Query: 396 FL 401
FL
Sbjct: 178 FL 179
Score = 40.7 bits (91), Expect = 0.022
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +2
Query: 53 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMV 196
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLV 110
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 83.8 bits (198), Expect = 2e-15
Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +3
Query: 225 WFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLG 404
WFG++K LA + T+ V NMI GVT G++YKM VY+HFPI +E + F+G
Sbjct: 66 WFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMG 125
Query: 405 XKYIXRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
K V GV + N KDE+ IEG +LEDVS I Q T +
Sbjct: 126 HKEHKIVTAPEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKI 174
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 79.4 bits (187), Expect = 5e-14
Identities = 46/109 (42%), Positives = 69/109 (63%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
VE + +KK+ A V T+ S + NMI GVTKG++YK++ VYAHFP++ + E + II I N
Sbjct: 55 VETFHATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IEN 112
Query: 396 FLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQST 542
FLG + + PG V +KD++I+EG L+ V+ +AA I +T
Sbjct: 113 FLGERGKRIAGIMPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLAT 158
Score = 38.7 bits (86), Expect = 0.090
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 172
M+ + + V IP+G+ VHV + V V+GP G ++++F H
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSH 40
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 74.9 bits (176), Expect = 1e-12
Identities = 40/104 (38%), Positives = 61/104 (58%)
Frame = +3
Query: 237 KKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYI 416
KK A V T H+ N+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+G K+
Sbjct: 80 KKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHP 137
Query: 417 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
R K+ V S + ++ + G +E+ +AA ++Q+T +
Sbjct: 138 RRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKI 178
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 74.1 bits (174), Expect = 2e-12
Identities = 43/104 (41%), Positives = 62/104 (59%)
Frame = +3
Query: 237 KKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYI 416
K+ LA T+ +H NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLG K
Sbjct: 58 KRILAMTGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQP 115
Query: 417 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
K+ GVTV DE+ I G E V ++AA I+ +T +
Sbjct: 116 RIAKIIEGVTVKIG---NDEVTITGIDKEKVGNTAANIEHATRI 156
Score = 32.7 bits (71), Expect = 5.9
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 74 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 187
++V+IP G+ V + ++TV GP+G L R+ + +D+
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL 42
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 73.3 bits (172), Expect = 3e-12
Identities = 37/111 (33%), Positives = 60/111 (54%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
V ++ +K A VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N
Sbjct: 57 VRCYYNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITN 116
Query: 396 FLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
G K I + V V + K E+I+ +E + ++LIQ ++
Sbjct: 117 LFGLKRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGILSSLIQNKCSI 167
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 73.3 bits (172), Expect = 3e-12
Identities = 34/111 (30%), Positives = 68/111 (61%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
+E F +++ A + ++ +H+ NMI G G++Y ++ + HFPI+ V G+ +++ N
Sbjct: 58 LETTFADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSN 115
Query: 396 FLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
+G K I R K+ PGV V + +++++EG+ + +V+ +AA I+ ST +
Sbjct: 116 LIGEKNIRRAKILPGVKVT---VKGEDIVVEGSDIYNVAQTAANIESSTKI 163
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 72.1 bits (169), Expect = 8e-12
Identities = 41/109 (37%), Positives = 65/109 (59%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
+E + K+E A + T + NM GVT+G++YK++ +Y HFP+ V +GN ++ I N
Sbjct: 59 MEVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IEN 116
Query: 396 FLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQST 542
FLG K + + GV V K K++++IEG E VS+ AA +Q +T
Sbjct: 117 FLGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAAT 163
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 71.7 bits (168), Expect = 1e-11
Identities = 43/104 (41%), Positives = 63/104 (60%)
Frame = +3
Query: 237 KKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYI 416
K++ A V T SH+ N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLG K
Sbjct: 60 KEQKAMVGTFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKK- 116
Query: 417 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
R+ G T V +E+++ G + EDV +AA I+Q T +
Sbjct: 117 PRIAKILGETKVK--VSGNEIVVSGINKEDVGQTAANIEQKTKI 158
Score = 33.9 bits (74), Expect = 2.6
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 80 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 193
++IP+G++V + + T KGP+G ++R F + + I +
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEV 46
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRN 395
+E +F +++E + T SH+ NM++GV F Y+++ Y HFP+ V EGN +I + N
Sbjct: 54 LETYFATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VEN 111
Query: 396 FLGXK--YIXRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQST 542
FLG K I + V V + K + E+++E E A++I+QST
Sbjct: 112 FLGEKAPIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQST 163
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/104 (36%), Positives = 64/104 (61%)
Frame = +3
Query: 237 KKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYI 416
K++LA + T S V N+ +GV G+ K++ VYAHFPI + +G ++I + NF G +
Sbjct: 46 KRDLAILNTARSIVRNLCEGVGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSA 103
Query: 417 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
+ K+ G VV+ + +++I+ G+ L DVS +AA ++Q T V
Sbjct: 104 RKAKIVGGTKVVS---KGEDVIVTGHVLTDVSQTAANLEQGTKV 144
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 66.5 bits (155), Expect = 4e-10
Identities = 39/112 (34%), Positives = 65/112 (58%)
Frame = +3
Query: 213 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 392
K+ K + +E V T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I
Sbjct: 53 KIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IE 110
Query: 393 NFLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
NF G + R G T V+ + D L + G S +DV +AA I+++T +
Sbjct: 111 NFFGER-SPRTAEIVGETQVS--VKGDRLFLNGPSKKDVGETAANIERATII 159
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 65.3 bits (152), Expect = 9e-10
Identities = 39/103 (37%), Positives = 58/103 (56%)
Frame = +3
Query: 240 KELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYIX 419
K ++ + T SH+ NM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLG K
Sbjct: 58 KTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPR 115
Query: 420 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
R + G T V +EL + G +E V +AA I+Q T +
Sbjct: 116 RTTI-HGDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRI 155
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 63.3 bits (147), Expect = 4e-09
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +3
Query: 237 KKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYI 416
KKE A T +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N G K +
Sbjct: 62 KKEKALAGTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-V 118
Query: 417 XRVKMAP--GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
RV P V + K ++ + G E V +AA I++S +
Sbjct: 119 PRVAALPWSPAEVEVKVQNKTDVTVSGADREKVGQTAANIERSCRI 164
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/105 (28%), Positives = 57/105 (54%)
Frame = +3
Query: 234 SKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKY 413
++++ A + + +++ NM KGVT+G +YK++ VY+HFP + + I NF+G +
Sbjct: 78 NRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMG-EN 136
Query: 414 IXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
+ RV Q ++I+ G E V +AA ++Q+T +
Sbjct: 137 VPRVAEIVDPENTEVIVQGQDIIVRGIDKEAVGQTAANLEQATYI 181
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 56.8 bits (131), Expect = 3e-07
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +3
Query: 306 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYIXRVKMAPGVTVVNSPKQKDELI 482
GF Y+MR+VYA FP N + E S+IE + +G KYI RV++ V S QK+EL+
Sbjct: 33 GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAFYASQAQKNELM 91
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 56.0 bits (129), Expect = 6e-07
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +3
Query: 237 KKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYI 416
K++ A + T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF G +
Sbjct: 64 KRDYAILHTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAP 121
Query: 417 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
+ V+ PK +D +++ G D++ +AA I+ +T V
Sbjct: 122 RSTHIMGNTKVI--PKGED-VLLTGEVWTDITQTAANIELTTKV 162
Score = 33.5 bits (73), Expect = 3.4
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 77 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVN 199
+V+IP+G+TV ++ +GP G +NF+++ V I + +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIAD 52
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/98 (33%), Positives = 52/98 (53%)
Frame = +3
Query: 255 VRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYIXRVKMA 434
V T S +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLG K K+
Sbjct: 67 VGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIV 124
Query: 435 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
G V + D + I G + +AA I+++T +
Sbjct: 125 DGCKV---SVKGDRITINGIDKRKIGETAANIERATYI 159
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 48.8 bits (111), Expect = 8e-05
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR 205
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKK 51
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 216 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKG 308
V+KW+G++KELA V T+CS V N IK VT G
Sbjct: 57 VDKWWGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 42.7 bits (96), Expect = 0.006
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = -2
Query: 548 DCSRLLDESSRARDIFQGVAFND*FILLFGRVNDSHTRCHLYPXDVFXPQEVTYLNN*IT 369
D + LL+ SS R+ FQGV N+ FILL R T + F QE++ N +T
Sbjct: 42 DTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISNFNVILT 101
Query: 368 L--SGDTVNGEVSIHSTHLVLEAFSYSFNHV 282
+ + VN E+ I+ +HLV FS + + V
Sbjct: 102 IFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 40.3 bits (90), Expect = 0.029
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +2
Query: 53 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAV 181
MK+++ +KV+IP+G +V + R++TV+G R R+ H +
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVL 43
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.12
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 169
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 37.1 bits (82), Expect = 0.27
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +2
Query: 119 RLVTVKGPRGVLKRNFKHLAVDIRM 193
+L+ + GPRG+L RNFKH ++DI++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV 77
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.27
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 166
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.48
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 172
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 36.3 bits (80), Expect = 0.48
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 196
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIV 46
>UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
BspA-like leucine rich repeat protein - Entamoeba
histolytica HM-1:IMSS
Length = 651
Score = 35.1 bits (77), Expect = 1.1
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 20 FPGSCVKQSPNMKQIVANQKVK-IPDGLTVHVKSRLVTVKGPRGV 151
F C KQ N+K I K+K IPDG S L+TVK P+GV
Sbjct: 591 FSTDCFKQCTNLKSIAIPLKLKEIPDGCFAGCSS-LITVKIPKGV 634
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 34.7 bits (76), Expect = 1.5
Identities = 20/86 (23%), Positives = 42/86 (48%)
Frame = +3
Query: 276 VXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYIXRVKMAPGVTVVN 455
+ NMIKGV+ GF+ K+ + F N + N I+ + +G + +K+ +T+
Sbjct: 80 IYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIMIKLPQSITLEV 136
Query: 456 SPKQKDELIIEGNSLEDVSSSAALIQ 533
+ ++I++ + + AA I+
Sbjct: 137 KMDKNPQIILKSYDKQLLGIVAAKIR 162
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.5
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 157
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 34.3 bits (75), Expect = 1.9
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 216 VEKWFGSKKELAAVR-TVCSHVXNMIKGVTKGFQYKM 323
V K +K L A+R T SHV NMIKGVT+G++ ++
Sbjct: 60 VVKRSSDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 1.9
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 172
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 33.9 bits (74), Expect = 2.6
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 187
VA +KIP G+ V+V + +TVKG G L R H AV +
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKV 44
Score = 33.9 bits (74), Expect = 2.6
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = +3
Query: 249 AAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYIXRVK 428
A T + + NM++GV GFQ K+ V + EG ++ +G + ++
Sbjct: 64 ALAGTARAVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNIE 117
Query: 429 MAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 536
M G+T V +P Q E+I++G + VS AA I++
Sbjct: 118 MPEGIT-VETPSQ-TEIIVKGADKQRVSQVAANIRE 151
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 33.5 bits (73), Expect = 3.4
Identities = 26/100 (26%), Positives = 49/100 (49%)
Frame = +3
Query: 237 KKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGXKYI 416
K+E A T + + NM+KGVT+GF+ + V + +G + I N +G +
Sbjct: 60 KEERAMHGTTRAIIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKL--ILN-VGYSHP 113
Query: 417 XRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 536
++ PG+ ++ + + +I+ G E V AA I++
Sbjct: 114 VEIEEEPGIEII--VEGNNRIIVRGADKERVGQVAANIRR 151
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 3.4
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 80 VKIPDGLTVHVKSRLVTVKGPRGVLKR 160
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 4.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 160
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 5.9
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 193
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 5.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 160
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 32.7 bits (71), Expect = 5.9
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 65 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 160
V + V+IP+G+ + + + VTVKGP+G L R
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSR 35
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 7.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 80 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 166
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,332,252
Number of Sequences: 1657284
Number of extensions: 10216909
Number of successful extensions: 23585
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 22988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23576
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -