Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_C08
         (555 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0566 - 18583624-18583710,18584445-18584567,18584682-18585044    139   1e-33
02_01_0029 - 176002-176137,176495-176646,177166-177577,178010-17...   139   1e-33
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858...    29   1.9  
03_06_0712 - 35683814-35684065,35685296-35685466                       27   7.6  

>09_04_0566 - 18583624-18583710,18584445-18584567,18584682-18585044
          Length = 190

 Score =  139 bits (337), Expect = 1e-33
 Identities = 64/112 (57%), Positives = 83/112 (74%)
 Frame = +3

Query: 213 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 392
           +V+ WFG+++ +AA+RT  SHV N+I GVTKG++YKMR VYAHFPIN   T  N+ IEIR
Sbjct: 55  QVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIR 114

Query: 393 NFLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
           NFLG K + +V M  GVT++ S K KDEL+++GN +E VS SAALI Q   V
Sbjct: 115 NFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHV 166



 Score = 60.5 bits (140), Expect = 9e-10
 Identities = 25/48 (52%), Positives = 40/48 (83%)
 Frame = +2

Query: 53  MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 196
           MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL 48


>02_01_0029 -
           176002-176137,176495-176646,177166-177577,178010-178126,
           178260-178322,178964-179167,180605-180687,182394-182516,
           182987-183328
          Length = 543

 Score =  139 bits (337), Expect = 1e-33
 Identities = 64/112 (57%), Positives = 83/112 (74%)
 Frame = +3

Query: 213 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 392
           +V+ WFG+++ +AA+RT  SHV N+I GVTKG++YKMR VYAHFPIN   T  N+ IEIR
Sbjct: 48  QVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIR 107

Query: 393 NFLGXKYIXRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV 548
           NFLG K + +V M  GVT++ S K KDEL+++GN +E VS SAALI Q   V
Sbjct: 108 NFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHV 159



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 22/39 (56%), Positives = 33/39 (84%)
 Frame = +2

Query: 80  VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 196
           ++IP G+TVHV +++VTV+GPRG L RNFKHL +D +++
Sbjct: 1   MEIPSGVTVHVAAKVVTVEGPRGKLTRNFKHLNLDFQLL 39


>07_03_0446 -
           18285132-18285221,18285437-18285499,18285805-18285867,
           18286079-18286129,18286413-18286506,18286696-18286856,
           18287089-18287145,18287380-18287493,18287934-18287999,
           18288063-18288266,18289207-18289284,18289669-18289788,
           18290425-18290491,18290635-18290735,18290820-18290936,
           18292024-18292107,18292181-18292309,18292385-18292510,
           18292622-18292696,18292814-18292947,18293032-18293137,
           18293220-18293276,18294387-18294573,18295244-18295407,
           18296129-18296353,18296538-18296744,18297043-18297375,
           18297604-18297993
          Length = 1220

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -3

Query: 262 VLTAASSFLDPNHFSTFRRARVYHANVNSQVFKVPFENSAGPFNCHQTRFH 110
           ++   SS ++  HF     A +Y   +  + F+  F N   PFN H   F+
Sbjct: 688 IIETTSSSVEGCHFGKI--AVLYRRQITGKAFQASFRNRKIPFNIHGVAFY 736


>03_06_0712 - 35683814-35684065,35685296-35685466
          Length = 140

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +2

Query: 149 VLKRNF-KHLAVDIRMVNPRSPE 214
           VLKR+F +  AVD+R +NP+ P+
Sbjct: 5   VLKRHFSRKRAVDVRRINPKVPK 27


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,223,757
Number of Sequences: 37544
Number of extensions: 282247
Number of successful extensions: 582
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)