Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C04
(506 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38; Eukaryo... 92 8e-18
UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; ... 91 1e-17
UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2; Caenor... 49 7e-05
UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved ... 42 0.008
UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6; ... 37 0.23
UniRef50_A1YWC3 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 4.9
UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1; ... 32 6.5
UniRef50_UPI000051ACD2 Cluster: PREDICTED: similar to NAT9; n=1;... 32 8.6
>UniRef50_P61165 Cluster: UPF0197 protein C11orf10; n=38;
Eukaryota|Rep: UPF0197 protein C11orf10 - Homo sapiens
(Human)
Length = 79
Score = 91.9 bits (218), Expect = 8e-18
Identities = 43/79 (54%), Positives = 52/79 (65%)
Frame = -2
Query: 415 LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXXWFFVYEVTSTKASRDMFKELLLSLVA 236
+E+E+M RYTSP+NPAVFPH WFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1 MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60
Query: 235 AXXXXXXXXXXXLWVGIYV 179
+ LWVGIYV
Sbjct: 61 SLFMGFGVLFLLLWVGIYV 79
>UniRef50_Q32P84 Cluster: UPF0197 protein C11orf10 homolog; n=2; Bos
taurus|Rep: UPF0197 protein C11orf10 homolog - Bos
taurus (Bovine)
Length = 79
Score = 91.5 bits (217), Expect = 1e-17
Identities = 42/79 (53%), Positives = 52/79 (65%)
Frame = -2
Query: 415 LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXXWFFVYEVTSTKASRDMFKELLLSLVA 236
+E+E+M RYTSP+NPAVFPH WFFVYEVTSTK +RD++KELL+SLVA
Sbjct: 1 MELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVA 60
Query: 235 AXXXXXXXXXXXLWVGIYV 179
+ LWVGIY+
Sbjct: 61 SLFMGFGVLFLLLWVGIYI 79
>UniRef50_Q965T1 Cluster: UPF0197 protein Y57E12AM.1; n=2;
Caenorhabditis|Rep: UPF0197 protein Y57E12AM.1 -
Caenorhabditis elegans
Length = 79
Score = 48.8 bits (111), Expect = 7e-05
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = -2
Query: 415 LEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXXWFFVYEVTSTKASRDMFKELLLSLVA 236
++I M RYT+P+N A P F + +VTSTK +R++ KEL ++ +
Sbjct: 1 MDISKMNRYTAPVNFASLPLLTTFLCGVGLLLLATFTMIQVTSTKYNRNLLKELFIAATS 60
Query: 235 AXXXXXXXXXXXLWVGIYV 179
+ LWVGIYV
Sbjct: 61 SVFLGFGSVFLLLWVGIYV 79
>UniRef50_UPI0000E4641D Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to conserved
hypothetical protein - Strongylocentrotus purpuratus
Length = 148
Score = 41.9 bits (94), Expect = 0.008
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -2
Query: 418 SLEIESMIRYTSPINPAVFPHXXXXXXXXXXXXXXWFFV 302
S IESM RY SP+NPAV+PH WF V
Sbjct: 22 SAAIESMTRYVSPVNPAVYPHLTLILLTIGIFFMAWFLV 60
>UniRef50_Q8LCF2 Cluster: Putative uncharacterized protein; n=6;
Magnoliophyta|Rep: Putative uncharacterized protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 76
Score = 37.1 bits (82), Expect = 0.23
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -2
Query: 385 SPINPAVFPHXXXXXXXXXXXXXXWFFVYEVTSTKASRDMFKELLLSLVAAXXXXXXXXX 206
SPI A++P FF+YE TS++ +R + KEL S VA+
Sbjct: 8 SPIPVALYPTLSVFTLAIGLVITAIFFIYEATSSRKNRSVGKELATSAVASVFLGFGSLF 67
Query: 205 XXLWVGIYV 179
L G+YV
Sbjct: 68 LLLASGVYV 76
>UniRef50_A1YWC3 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=1; Cephalothrix rufifrons|Rep: NADH-ubiquinone
oxidoreductase chain 2 - Cephalothrix rufifrons
Length = 345
Score = 32.7 bits (71), Expect = 4.9
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 291 QVLKPQEICSKSYFYHWWPPYFLVSVFCSCCYG*GFMCDINVRYNLSYE*CNTIPLLM 118
Q L P IC +F W+ +SVFCS G G + + +R ++Y N + +M
Sbjct: 135 QKLAPLFICFWFFFDSWFFVVLFLSVFCSIIGGLGGINQVQIRVLMAYSSINHLGWMM 192
>UniRef50_A2FDS4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 489
Score = 32.3 bits (70), Expect = 6.5
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 138 YIIHNLNYTLH*YHT*IPTHSNKNKIPKPENKAATNDKSNSLNISLE 278
++ H+ +H + +P H +N+IPKP N N + LN+ +
Sbjct: 51 HVYHSYPILMHQIYDGLPEHEQQNQIPKPNNPEFKNIFLHKLNLGCQ 97
>UniRef50_UPI000051ACD2 Cluster: PREDICTED: similar to NAT9; n=1;
Apis mellifera|Rep: PREDICTED: similar to NAT9 - Apis
mellifera
Length = 267
Score = 31.9 bits (69), Expect = 8.6
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 371 GSFSTSNLFVARNRN-IXHGLVLRLRSYKY*SLKRYVQRVTFIIGGRLIFWFRYFVLVAM 195
GSF T F + N + ++L SY + LKRY FI G L W+++ +
Sbjct: 172 GSFYTGAEFTQQTYNRMFKNNTMQLESYNWAQLKRYAIYGCFIAGPLLHGWYKWLDMFYK 231
Query: 194 GRDLCVI 174
G+ + I
Sbjct: 232 GKTMKTI 238
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,860,412
Number of Sequences: 1657284
Number of extensions: 6893315
Number of successful extensions: 16070
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16059
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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