Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C03
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 182 9e-45
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 174 1e-42
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 166 5e-40
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 123 3e-27
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 106 5e-22
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 106 5e-22
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 101 1e-20
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 97 3e-19
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 91 2e-17
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 87 5e-16
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 72 1e-11
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 69 1e-10
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 64 2e-09
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 63 6e-09
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 54 4e-06
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 46 6e-04
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 45 0.001
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 37 0.48
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 35 1.5
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 34 3.4
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 7.9
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 7.9
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 182 bits (442), Expect = 9e-45
Identities = 96/208 (46%), Positives = 130/208 (62%), Gaps = 4/208 (1%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILS---TV 193
MGISRD+WHKRR TG + + ++ R A ++ R +H V +
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVRVRGGNKKY 55
Query: 194 RCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYES 370
R + V + + + ++ + + + N V+ + L KN IV++D+TP+RQWYES
Sbjct: 56 RALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYES 115
Query: 371 HYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACV 550
HY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+
Sbjct: 116 HYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175
Query: 551 ASRPGQCGRXDGYILQXKELEFYLTKIK 634
ASRPGQCGR DGY+L+ KELEFYL KIK
Sbjct: 176 ASRPGQCGRADGYVLEGKELEFYLRKIK 203
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 174 bits (424), Expect = 1e-42
Identities = 99/205 (48%), Positives = 127/205 (61%), Gaps = 1/205 (0%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILSTVRCV 202
MGISRD+WHKRR TG + + ++ R A ++ R +H V VR
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVR----VRGG 51
Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYESHYT 379
T T + D + + + N V+ + L KN IV++D+TP+RQWYESHY
Sbjct: 52 CTRKTRIID-------------VVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYA 98
Query: 380 LPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASR 559
LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+ASR
Sbjct: 99 LPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASR 158
Query: 560 PGQCGRXDGYILQXKELEFYLTKIK 634
PGQCGR DGY+L+ KELEFYL KIK
Sbjct: 159 PGQCGRADGYVLEGKELEFYLRKIK 183
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +1
Query: 178 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQEC 324
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNC 80
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 158
GKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 166 bits (403), Expect = 5e-40
Identities = 90/207 (43%), Positives = 128/207 (61%), Gaps = 3/207 (1%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILSTVRCV 202
MGISRD HKRRATG + + ++ + R + + + V + +R +
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKF--ELGRPAANTKLGSGRVHKVRTRGGNTKLRAL 58
Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYESHYT 379
+ + +A+ + + + + N V+ + L KN+IVV+DATPFRQWYE+HY
Sbjct: 59 RLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYV 118
Query: 380 LPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVA 553
LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE AL +QF +GR+LAC++
Sbjct: 119 LPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACIS 178
Query: 554 SRPGQCGRXDGYILQXKELEFYLTKIK 634
SRPGQCGR DGYIL+ KELEFYL KIK
Sbjct: 179 SRPGQCGRSDGYILEGKELEFYLKKIK 205
Score = 89.8 bits (213), Expect = 5e-17
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 318
R+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTLV+
Sbjct: 47 RTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVK 98
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIH 155
GKR +RKKRK+ELGRPAANT+LG R+H
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVH 44
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 123 bits (297), Expect = 3e-27
Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 9/213 (4%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILSTVRCV 202
MGISRD HKRRATG + A ++ + + + + SS +R V V R +
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYEL-GRQPANTKLSSNKTVRRVRVRGGNVKWRAL 59
Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYESHYT 379
+ + + + ++ + + + N V+ + L K+AIV VDA PF+QWY +HY
Sbjct: 60 RLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYG 119
Query: 380 LPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGR 535
+ +GRKK A+ E E A K+S RK R+ ++ + EQF +GR
Sbjct: 120 VDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGR 179
Query: 536 LLACVASRPGQCGRXDGYILQXKELEFYLTKIK 634
LLAC++SRPGQCGR DGYIL+ KELEFY+ K++
Sbjct: 180 LLACISSRPGQCGRADGYILEGKELEFYMKKLQ 212
Score = 94.7 bits (225), Expect = 2e-18
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 318
R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLV+
Sbjct: 48 RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVK 99
Score = 35.9 bits (79), Expect = 0.84
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQR 149
GK+ RKKRKYELGR ANT+L +
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNK 42
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 106 bits (254), Expect = 5e-22
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILS---TV 193
MGISRD+WHKRR TG + + ++ R A ++ R +H V +
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVRVRGGNKKY 55
Query: 194 RCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYES 370
R + V + + + ++ + + + N V+ + L KN IV++D+TP+RQWYES
Sbjct: 56 RALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYES 115
Query: 371 HYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 472
HY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 116 HYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Score = 106 bits (254), Expect = 5e-22
Identities = 55/86 (63%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +1
Query: 70 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 246
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 247 KTRIIDVVYNASNNELVRTKTLVQEC 324
KTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNC 100
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 106 bits (254), Expect = 5e-22
Identities = 57/119 (47%), Positives = 76/119 (63%), Gaps = 9/119 (7%)
Frame = +2
Query: 317 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 475
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 476 ARQRL--AKVEGALXEQFHTGRLLACVASRPGQCGRXDGYILQXKELEFYLTKIKFNRA 646
RQ L A VE +L E+F TGRLLAC++S+PGQ GR DGY+ + KELEF+ K+K +A
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKA 119
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 101 bits (243), Expect = 1e-20
Identities = 73/218 (33%), Positives = 106/218 (48%), Gaps = 14/218 (6%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILSTVRCV 202
MGI R HKR+ TG +T H + + R R A + V +R +
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKA--ELGRLPANTRLGARRVSPVRARGGNFKIRAL 58
Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYESHYT 379
+ + +A V L+ + + T N V+ + L KN IV VDA PF++WY HY
Sbjct: 59 RLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYG 118
Query: 380 LPLGR-KKGAKLTEAEE--------AIINK----KRSQKTARKYLARQRLAKVEGALXEQ 520
+ L KK K A E A +K K S K R++ R+R +VE A+ +Q
Sbjct: 119 IDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQ 178
Query: 521 FHTGRLLACVASRPGQCGRXDGYILQXKELEFYLTKIK 634
GR+LA + SRPGQ GR DG +L+ EL+FYL +++
Sbjct: 179 LREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLE 216
Score = 88.2 bits (209), Expect = 1e-16
Identities = 38/57 (66%), Positives = 47/57 (82%)
Frame = +1
Query: 154 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQEC 324
+P R+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTLV+ C
Sbjct: 44 SPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNC 100
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 97.1 bits (231), Expect = 3e-19
Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILSTVRCV 202
MGISRD HKRR TG H ++ + R + + +R V R +
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKY--ELGRPSSNTKLGSKLVRKVRCRGGNLKFRAL 58
Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYESHYT 379
+ + + + +M + + + N V+ + L KNAIV VD TPF+ W+++HY
Sbjct: 59 RLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYG 118
Query: 380 LPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASR 559
L LG K +E +A S+K A A V L +QF +GRLLAC++SR
Sbjct: 119 LELG-----KSSEDPQA------SEKVA---------ALVPRTLLDQFSSGRLLACISSR 158
Query: 560 PGQCGRXDGYILQXKELEFY 619
PGQCGR DGY+L+ +EL FY
Sbjct: 159 PGQCGRCDGYVLEGEELNFY 178
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 318
R RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLV+
Sbjct: 47 RCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVK 98
Score = 39.5 bits (88), Expect = 0.069
Identities = 17/29 (58%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = +3
Query: 69 GKRAPI-RKKRKYELGRPAANTRLGPQRI 152
G R P+ +KKRKYELGRP++NT+LG + +
Sbjct: 15 GGRYPVHKKKRKYELGRPSSNTKLGSKLV 43
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 91.5 bits (217), Expect = 2e-17
Identities = 56/141 (39%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = +2
Query: 215 TSLGDRNVQLAKPVSLMLCIMHLTMNWCVQRPLFKNAIVVVDATPFRQWYESHYTLPLGR 394
TS G N +P S M M TM+W R + ++ A L LG
Sbjct: 4 TSHGALNAAPERPGSSMWSTMPPTMSWLEPRHWSRTVSSLLTACLLDSGMRPIMPLLLGA 63
Query: 395 KKGAK-LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQC 571
++ T EE ++NKKRS+KT +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 572 GRXDGYILQXKELEFYLTKIK 634
GR DGYIL+ KELEFYL KIK
Sbjct: 124 GRADGYILEGKELEFYLRKIK 144
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 86.6 bits (205), Expect = 5e-16
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 318
R RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELVRT+TLV+
Sbjct: 145 RVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELVRTQTLVK 196
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 311 LFKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 427
L K+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 194 LVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQEC 324
R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLV+ C
Sbjct: 56 RCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGC 109
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 509 LXEQFHTGRLLACVASRPGQCGRXDGYILQXKELEFYLTKI 631
+ +Q +LA ++SRPGQ G DGYIL+ EL FY K+
Sbjct: 131 ILDQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKL 171
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +2
Query: 407 KLTEAEEAIIN-KKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRXD 583
++ E + A++N K QK K L + K + AL E F +GR+LAC++SRPGQ G +
Sbjct: 157 QIAETQVALMNPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVE 216
Query: 584 GYILQXKELEFYLTKI 631
GYIL+ KEL+FY KI
Sbjct: 217 GYILEGKELDFYSKKI 232
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 318
R R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLV+
Sbjct: 47 RCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVK 98
Score = 35.9 bits (79), Expect = 0.84
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIH 155
GK+ ++KK+K +GR ANTRLG R+H
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVH 44
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 392 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALXEQFHTGRLLACVASRPGQ 568
R + + E I K R +K AR KVE AL +QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 569 CGRXDGYILQXKELEFYLTKIK 634
GR DGYIL+ +EL FY I+
Sbjct: 119 SGRVDGYILEGEELAFYQRAIR 140
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 267
R+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 47 RTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 72 KRAPIRKKRKYELGRPAANTRLGPQRIH 155
KR+ RKKR +E GR ANTR+GP+RIH
Sbjct: 17 KRSHYRKKRAFEKGRQPANTRIGPKRIH 44
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 62.9 bits (146), Expect = 6e-09
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +1
Query: 154 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 318
TP R RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL +
Sbjct: 44 TPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTK 98
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +2
Query: 497 VEGALXEQFHTGRLLACVASRPGQCGRXDGYILQXKELEFYLTKIKFNR 643
V+ +L E F G L A + SRPGQ G G++LQ EL+FY KFN+
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYAD--KFNK 166
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 318
R RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL +
Sbjct: 47 RVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTK 98
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/42 (52%), Positives = 33/42 (78%)
Frame = +2
Query: 509 LXEQFHTGRLLACVASRPGQCGRXDGYILQXKELEFYLTKIK 634
L +Q +G++LA + SRPGQ GR DGYIL+ +EL+++L KI+
Sbjct: 135 LIDQILSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQ 176
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 46.4 bits (105), Expect = 6e-04
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 312
R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L
Sbjct: 41 RVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNL 90
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +2
Query: 356 QWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGR 535
Q Y HY L +G KK A T ++ +++ RK RQ+ K++ + EQF +GR
Sbjct: 45 QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRKLEKRQQDHKLDPHIEEQFGSGR 100
Query: 536 LLACVASRPG 565
LLA ++S PG
Sbjct: 101 LLAAISSYPG 110
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 36.7 bits (81), Expect = 0.48
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQ 318
R+ GGN K RALRL+ S + T+KT+I V N+++ VR K L +
Sbjct: 45 RTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLLTK 96
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 60 PPAGKRAPIRKKRKYELGRPAANTRLGPQR 149
P G+ P RKKRK+E+G P T +G +R
Sbjct: 12 PTGGRIRPHRKKRKFEMGNPPTETLVGEER 41
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 257 SLMLCIMHLTMNWCVQRPLFKNAIVVVD-ATPFRQWYESHYTLPLGRKKGAKLTEAE 424
S + + + W ++ P + D ATPF Q + +HY L RKKG K+ E E
Sbjct: 345 STQVSLQKILYLWAIRHPASGYVQGINDLATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 316
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 33 VGITGISEGPPAGKRAPIRKKRKYELGRPAANTRLGPQRIHSXSF-TWWKY 182
+G+TG G PA ++ ++K++ + P T L P+ +S SF T W +
Sbjct: 10 MGLTGSLAGTPAPEKKQVKKRKSWGQQLPEPKTNLPPRYFNSSSFITQWHW 60
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 60 PPAGKRAPIRKKRKYELGRPAANTRLGPQRI 152
P GK P KR+YELGR TRLG + +
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDREL 42
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 413 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQF 523
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 326 IVVVDATPFRQWYESHYTLPLGRKK 400
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,400,348
Number of Sequences: 1657284
Number of extensions: 12533411
Number of successful extensions: 34223
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 33179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34207
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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