Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C03
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 182 1e-45
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 182 1e-45
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 182 1e-45
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 182 1e-45
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 174 2e-43
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 105 1e-22
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 30 6.2
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 30 6.2
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 30 6.2
AL606804-1|CAI17145.1| 317|Homo sapiens olfactory receptor, fam... 30 6.2
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 30 6.2
BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein. 30 8.2
BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein. 30 8.2
AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein. 30 8.2
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 182 bits (442), Expect = 1e-45
Identities = 96/208 (46%), Positives = 130/208 (62%), Gaps = 4/208 (1%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILS---TV 193
MGISRD+WHKRR TG + + ++ R A ++ R +H V +
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVRVRGGNKKY 55
Query: 194 RCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYES 370
R + V + + + ++ + + + N V+ + L KN IV++D+TP+RQWYES
Sbjct: 56 RALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYES 115
Query: 371 HYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACV 550
HY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+
Sbjct: 116 HYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175
Query: 551 ASRPGQCGRXDGYILQXKELEFYLTKIK 634
ASRPGQCGR DGY+L+ KELEFYL KIK
Sbjct: 176 ASRPGQCGRADGYVLEGKELEFYLRKIK 203
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 182 bits (442), Expect = 1e-45
Identities = 96/208 (46%), Positives = 130/208 (62%), Gaps = 4/208 (1%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILS---TV 193
MGISRD+WHKRR TG + + ++ R A ++ R +H V +
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVRVRGGNKKY 55
Query: 194 RCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYES 370
R + V + + + ++ + + + N V+ + L KN IV++D+TP+RQWYES
Sbjct: 56 RALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYES 115
Query: 371 HYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACV 550
HY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+
Sbjct: 116 HYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175
Query: 551 ASRPGQCGRXDGYILQXKELEFYLTKIK 634
ASRPGQCGR DGY+L+ KELEFYL KIK
Sbjct: 176 ASRPGQCGRADGYVLEGKELEFYLRKIK 203
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 182 bits (442), Expect = 1e-45
Identities = 96/208 (46%), Positives = 130/208 (62%), Gaps = 4/208 (1%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILS---TV 193
MGISRD+WHKRR TG + + ++ R A ++ R +H V +
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVRVRGGNKKY 55
Query: 194 RCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYES 370
R + V + + + ++ + + + N V+ + L KN IV++D+TP+RQWYES
Sbjct: 56 RALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYES 115
Query: 371 HYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACV 550
HY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+
Sbjct: 116 HYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175
Query: 551 ASRPGQCGRXDGYILQXKELEFYLTKIK 634
ASRPGQCGR DGY+L+ KELEFYL KIK
Sbjct: 176 ASRPGQCGRADGYVLEGKELEFYLRKIK 203
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 182 bits (442), Expect = 1e-45
Identities = 96/208 (46%), Positives = 130/208 (62%), Gaps = 4/208 (1%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILS---TV 193
MGISRD+WHKRR TG + + ++ R A ++ R +H V +
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVRVRGGNKKY 55
Query: 194 RCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYES 370
R + V + + + ++ + + + N V+ + L KN IV++D+TP+RQWYES
Sbjct: 56 RALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYES 115
Query: 371 HYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACV 550
HY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+
Sbjct: 116 HYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175
Query: 551 ASRPGQCGRXDGYILQXKELEFYLTKIK 634
ASRPGQCGR DGY+L+ KELEFYL KIK
Sbjct: 176 ASRPGQCGRADGYVLEGKELEFYLRKIK 203
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 174 bits (424), Expect = 2e-43
Identities = 99/205 (48%), Positives = 127/205 (61%), Gaps = 1/205 (0%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARSSAYPLRFVHVVEILSTVRCV 202
MGISRD+WHKRR TG + + ++ R A ++ R +H V VR
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKK-----RKYELGRPAANTKIGPRRIHTVR----VRGG 51
Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLFKNAIVVVDATPFRQWYESHYT 379
T T + D + + + N V+ + L KN IV++D+TP+RQWYESHY
Sbjct: 52 CTRKTRIID-------------VVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYA 98
Query: 380 LPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASR 559
LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+ASR
Sbjct: 99 LPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASR 158
Query: 560 PGQCGRXDGYILQXKELEFYLTKIK 634
PGQCGR DGY+L+ KELEFYL KIK
Sbjct: 159 PGQCGRADGYVLEGKELEFYLRKIK 183
Score = 58.8 bits (136), Expect = 2e-08
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +1
Query: 178 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVQEC 324
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLV+ C
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNC 80
Score = 56.4 bits (130), Expect = 8e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 158
GKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 105 bits (253), Expect = 1e-22
Identities = 48/75 (64%), Positives = 58/75 (77%)
Frame = +2
Query: 410 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALXEQFHTGRLLACVASRPGQCGRXDGY 589
LT EE I+NKKRS+K +KY R++ AK+ L EQF G+LLAC+ASRPGQCGR DGY
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60
Query: 590 ILQXKELEFYLTKIK 634
+L+ KELEFYL KIK
Sbjct: 61 VLEGKELEFYLRKIK 75
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 389 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALXEQ 520
GRKK +++TE ++AI+ K+ + R+Y R Q+L + E AL Q
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLER-ERALARQ 50
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 389 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALXEQ 520
GRKK +++TE ++AI+ K+ + R+Y R Q+L + E AL Q
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLER-ERALARQ 50
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 389 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALXEQ 520
GRKK +++TE ++AI+ K+ + R+Y R Q+L + E AL Q
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLER-ERALARQ 50
>AL606804-1|CAI17145.1| 317|Homo sapiens olfactory receptor, family
2, subfamily B, memberd protein 1 protein.
Length = 317
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 329 QLHS*TRVFVRTNSLLDALYTTSMIRVLRVEHSDPQEKLPVSRRSARYLVF 177
QLHS +F+ S LD YTT+ + + V Q+ + + +Y VF
Sbjct: 58 QLHSPMYIFLSHLSFLDLCYTTTTVPQMLVNMGSSQKTISYGGCTVQYAVF 108
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 389 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALXEQ 520
GRKK +++TE ++AI+ K+ + R+Y R Q+L + E AL Q
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLER-ERALARQ 50
>BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein.
Length = 446
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 558 RLATQASKRPVWNCSXRAPSTL 493
R A AS+RP+W+ S RAPS L
Sbjct: 329 RSAPAASERPLWDTSLRAPSCL 350
>BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein.
Length = 391
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 558 RLATQASKRPVWNCSXRAPSTL 493
R A AS+RP+W+ S RAPS L
Sbjct: 69 RSAPAASERPLWDTSLRAPSCL 90
>AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein.
Length = 634
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 558 RLATQASKRPVWNCSXRAPSTL 493
R A AS+RP+W+ S RAPS L
Sbjct: 506 RSAPAASERPLWDTSLRAPSCL 527
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,994,511
Number of Sequences: 237096
Number of extensions: 2052481
Number of successful extensions: 4358
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4346
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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