Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_C02
(379 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31160.1 68414.m03812 zinc-binding protein, putative / protei... 68 2e-12
At3g56490.1 68416.m06282 zinc-binding protein, putative / protei... 60 5e-10
At5g48545.1 68418.m06002 histidine triad family protein / HIT fa... 46 1e-05
At4g16566.1 68417.m02507 histidine triad family protein / HIT fa... 42 2e-04
At5g58240.2 68418.m07291 bis(5'-adenosyl)-triphosphatase, putati... 32 0.11
At5g58240.1 68418.m07292 bis(5'-adenosyl)-triphosphatase, putati... 32 0.11
At3g03710.1 68416.m00375 polyribonucleotide nucleotidyltransfera... 30 0.44
At5g52620.1 68418.m06533 F-box family protein contains Pfam prof... 29 1.4
At2g26780.1 68415.m03212 expressed protein contains Pfam profile... 29 1.4
At2g46270.2 68415.m05754 G-box binding factor 3 (GBF3) identical... 28 1.8
At1g14590.1 68414.m01735 expressed protein similar to GI:4406788... 27 3.1
At3g02110.1 68416.m00177 serine carboxypeptidase S10 family prot... 27 5.5
At5g54450.1 68418.m06781 hypothetical protein contains Pfam prof... 26 9.6
At5g03020.1 68418.m00249 kelch repeat-containing F-box family pr... 26 9.6
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 26 9.6
At2g46270.1 68415.m05753 G-box binding factor 3 (GBF3) identical... 26 9.6
>At1g31160.1 68414.m03812 zinc-binding protein, putative / protein
kinase C inhibitor, putative similar to 14 kDa
zinc-binding protein (Protein kinase C inhibitor, PKCI)
[Zea mays] Swiss-Prot:P42856
Length = 187
Score = 68.1 bits (159), Expect = 2e-12
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +2
Query: 38 AQTAAPGGDTIFGKILRKEIPANFIYEDEQCVXFNDVNPQAPTHVLVIPR 187
A A G TIF KI+ KEIP++ +YEDE + F D+NPQAP HVLVIP+
Sbjct: 67 ASVADTGAPTIFDKIIAKEIPSDIVYEDENVLAFRDINPQAPVHVLVIPK 116
Score = 50.4 bits (115), Expect = 4e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +3
Query: 213 ADDTDEQLLGHLLIVARKVAAQLGLDKTGFRLVVTDGKNGAQSVYHLHIHILXGR 377
A+ ++LG LL ++ VA + G+ GFR+V+ +G QSVYHLH+H+L GR
Sbjct: 127 AEPRHVEVLGQLLHASKIVAEKEGI-LDGFRVVINNGVEACQSVYHLHLHVLGGR 180
>At3g56490.1 68416.m06282 zinc-binding protein, putative / protein
kinase C inhibitor, putative similar to 14 kDa
zinc-binding protein (Protein kinase C inhibitor, PKCI)
[Zea mays] Swiss-Prot:P42856
Length = 147
Score = 60.1 bits (139), Expect = 5e-10
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +3
Query: 213 ADDTDEQLLGHLLIVARKVAAQLGLDKTGFRLVVTDGKNGAQSVYHLHIHILXGR 377
A++ +LG LL A+ VA Q GL + GFR+V+ DG G QSVYH+H+H++ GR
Sbjct: 87 AEERHIDILGRLLYTAKLVAKQEGLAE-GFRIVINDGPQGCQSVYHIHVHLIGGR 140
Score = 56.8 bits (131), Expect = 4e-09
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 26 EVKLAQTAAPGGD-TIFGKILRKEIPANFIYEDEQCVXFNDVNPQAPTHVLVIPR 187
E + A A P TIF KI+ KEIP+ ++ED++ + F D+ PQ P H+L+IP+
Sbjct: 22 EKEAALAATPSDSPTIFDKIISKEIPSTVVFEDDKVLAFRDITPQGPVHILLIPK 76
>At5g48545.1 68418.m06002 histidine triad family protein / HIT
family protein contains Pfam profile PF01230:HIT domain;
contains Prosite motif PS00892: HIT family signature.
Length = 197
Score = 45.6 bits (103), Expect = 1e-05
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2
Query: 20 DGEVKLAQTAAPGGDTIFGKILRKEIPANFIYEDEQCVXFNDVNPQAPTHVLVIPRKPIP 199
DG+V +++ D +F KI+R E P +YED+ C+ D NP + H L+IP+ P
Sbjct: 38 DGKV---ESSTLQNDCVFCKIIRGESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYP 94
Query: 200 QL 205
L
Sbjct: 95 TL 96
Score = 29.5 bits (63), Expect = 0.78
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 252 IVARKVAAQLGLDKTGFRLVVTDGKNGAQSVYHLHIHIL 368
+++ + G D F L+V +G Q ++H HIHI+
Sbjct: 113 LISNAIVKATGSDS--FNLLVNNGAAAGQVIFHTHIHII 149
>At4g16566.1 68417.m02507 histidine triad family protein / HIT
family protein contains Pfam domain, PF01230: HIT family
(histidine triad protein family)
Length = 146
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 68 IFGKILRKEIPANFIYEDEQCVXFNDVNPQAPTHVLVIPRKPIPQLS 208
IF +I+R ++ DE+ + F D+ P A H LVIP++ IP ++
Sbjct: 9 IFCEIVRNPTTTRLLHTDEKVIAFQDIKPAAQRHYLVIPKEHIPTVN 55
>At5g58240.2 68418.m07291 bis(5'-adenosyl)-triphosphatase, putative
similar to bis(5'-adenosyl)-triphosphatase (Diadenosine
5',5'''- P1,P3-triphosphate hydrolase,
Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE,
Fragile histidine triad protein) [Homo sapiens]
Swiss-Prot:P49789
Length = 160
Score = 32.3 bits (70), Expect = 0.11
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 207 RLADDTDEQLLGHLLIVARKVAAQLGL--DKTGFRLVVTDGKNGAQSVYHLHIHIL 368
R D T ++ L + A+KV ++L + + L + DG Q+V H+HIHIL
Sbjct: 51 RFTDLTADET-SDLWLTAQKVGSKLETFHNASSLTLAIQDGPQAGQTVPHVHIHIL 105
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 98 PANFIYEDEQCVXFNDVNPQAPTHVLVIPRKPIPQLS 208
P Y ++ P P HVLV PR+ +P+ +
Sbjct: 17 PREVFYATPLSYAMVNLRPLLPAHVLVCPRRLVPRFT 53
>At5g58240.1 68418.m07292 bis(5'-adenosyl)-triphosphatase, putative
similar to bis(5'-adenosyl)-triphosphatase (Diadenosine
5',5'''- P1,P3-triphosphate hydrolase,
Dinucleosidetriphosphatase, AP3A hydrolase, AP3AASE,
Fragile histidine triad protein) [Homo sapiens]
Swiss-Prot:P49789
Length = 180
Score = 32.3 bits (70), Expect = 0.11
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 207 RLADDTDEQLLGHLLIVARKVAAQLGL--DKTGFRLVVTDGKNGAQSVYHLHIHIL 368
R D T ++ L + A+KV ++L + + L + DG Q+V H+HIHIL
Sbjct: 71 RFTDLTADET-SDLWLTAQKVGSKLETFHNASSLTLAIQDGPQAGQTVPHVHIHIL 125
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 98 PANFIYEDEQCVXFNDVNPQAPTHVLVIPRKPIPQLS 208
P Y ++ P P HVLV PR+ +P+ +
Sbjct: 37 PREVFYATPLSYAMVNLRPLLPAHVLVCPRRLVPRFT 73
>At3g03710.1 68416.m00375 polyribonucleotide nucleotidyltransferase,
putative similar to polynucleotide phosphorylase
GB:AAC50039 [Pisum sativum], identical to putative
polynucleotide phosphorylase GB:AAF00646 [Arabidopsis
thaliana]
Length = 922
Score = 30.3 bits (65), Expect = 0.44
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 116 EDEQCVXFNDVNPQAPTHVLVIPRKPIPQL 205
EDE+ V +V+ Q H+ IPRKPIP L
Sbjct: 391 EDEEVVPEGEVD-QGDVHIRPIPRKPIPLL 419
>At5g52620.1 68418.m06533 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 375
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 328 FFPSVTTRRKPVLSRPSWAATLRATIRRCPNNCSSV 221
+FP+ T PV+ PS R T R NN SS+
Sbjct: 115 YFPNTRTGEVPVICNPSTGQYARLTQRSSMNNLSSL 150
>At2g26780.1 68415.m03212 expressed protein contains Pfam profile TBP
(TATA-binding protein) -interacting protein 120 (TIP120);
contains TIGRFAM profile TIGR01612: reticulocyte binding
protein
Length = 1866
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 192 GFLGITNT*VGACGFTSLNXTHCSSS*MKFAGISLRNIFPKIVSPPGAAVCASFTSPSAM 13
G +G+ NT VG F SL S F G+ LR +FP +A +F+S +
Sbjct: 1387 GGVGL-NTRVGVASFISLLVQKVGSEIKPFTGMLLRLLFPVAKEEKSSAAKRAFSSACGI 1445
Query: 12 FRK 4
K
Sbjct: 1446 VLK 1448
>At2g46270.2 68415.m05754 G-box binding factor 3 (GBF3) identical to
G-box binding factor 3 (GBF3) SP:P42776 from
[Arabidopsis thaliana]; contains Pfam profile: PF00170
bZIP transcription factor
Length = 359
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 377 PSSEDMNVKVVNALGAILSIGN 312
PSS D VK++ GAILS GN
Sbjct: 212 PSSGDTGVKLIQGSGAILSPGN 233
>At1g14590.1 68414.m01735 expressed protein similar to GI:4406788,
GI:6063544, GI:2827651, GI:10764853 from [Arabidopsis
thaliana]
Length = 386
Score = 27.5 bits (58), Expect = 3.1
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 195 FHSSRLADDTDEQLLGHLLIVARKVAAQ---LGLDKTGFRLVVTDGKNGAQSVYHL 353
F S R+ ++T Q+L HL+IVA A L L K F L VT+G + ++ Y +
Sbjct: 119 FESFRIGEETS-QILDHLVIVALDAKAYSRCLELHKHCFSL-VTEGVDFSREAYFM 172
>At3g02110.1 68416.m00177 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase II (CP-MII)
GB:CAA70815 (SP:P08818) [Hordeum vulgare]
Length = 473
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 241 PNNCSSVSSARRELWNRLPWYHQYMSRSL--WVHIIE 137
P + S AR L +LPWY Y+ + + W + E
Sbjct: 399 PVTATRYSLARLSLSTKLPWYPWYVKKQVGGWTEVYE 435
>At5g54450.1 68418.m06781 hypothetical protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 368
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 46 CRSRR*YNLWENIT*RNPCKFHLR 117
CR R ++ W NI NPC F R
Sbjct: 166 CRPARSHSDWTNIRIENPCFFSSR 189
>At5g03020.1 68418.m00249 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 347
Score = 25.8 bits (54), Expect = 9.6
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 331 PFFPSVTTRRKP-VLSRPSWAATLRATIRRCPNNCSSVSSARRELWNRLPWYHQ 173
P+FP+ + P V+S S + +RR +N S+ R W RLP Q
Sbjct: 100 PWFPNQQYPQYPTVVSNGSQIYIIGGFVRRRRSNRVSIFDYRTYQWRRLPKMRQ 153
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 25.8 bits (54), Expect = 9.6
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -3
Query: 89 YVIFSQRLYHRLERQFVRVSPHR 21
+++FS +YH + Q+V ++P +
Sbjct: 406 HLMFSHEMYHTIRGQYVTINPRK 428
>At2g46270.1 68415.m05753 G-box binding factor 3 (GBF3) identical to
G-box binding factor 3 (GBF3) SP:P42776 from
[Arabidopsis thaliana]; contains Pfam profile: PF00170
bZIP transcription factor
Length = 382
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 377 PSSEDMNVKVVNALGAILSIG 315
PSS D VK++ GAILS G
Sbjct: 212 PSSGDTGVKLIQGSGAILSPG 232
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,516,078
Number of Sequences: 28952
Number of extensions: 156599
Number of successful extensions: 393
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 517767328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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