Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_B23
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   303   2e-84
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   1.5  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.6  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   2.6  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   7.9  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  303 bits (745), Expect = 2e-84
 Identities = 144/188 (76%), Positives = 164/188 (87%)
 Frame = +1

Query: 31  TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 210
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 211 PKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVY 390
           PK KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VY
Sbjct: 65  PKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVY 124

Query: 391 DAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGREVT 570
           DAIL DLVFPAE+VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF SVY KLTGR+VT
Sbjct: 125 DAILEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVT 184

Query: 571 FEFPEPYL 594
           FEFPE YL
Sbjct: 185 FEFPENYL 192


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 611 VIG*VYK*GSGNSKVTSRPVSXLYTDWKV 525
           VI  V K G G++  + RP+S L TD+K+
Sbjct: 503 VIVLVRKKGGGDAMSSIRPISLLNTDYKL 531


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +1

Query: 328 HKTRVANKQKRPRSXTLTSVYDAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 507
           H     N   +     L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T
Sbjct: 19  HGAVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 75


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +1

Query: 328 HKTRVANKQKRPRSXTLTSVYDAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 507
           H     N   +     L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T
Sbjct: 19  HGAVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 75


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 458 SNLTLMRLPTISAGKTKSSRIASYTEVNVXERGLFCLLATRVLWLGLGRIL 306
           +N  L+ +P  +   T SSR       +     L CLLAT V+W   G++L
Sbjct: 54  ANSRLVTVPAPAKELTDSSRSGGLPSSS-SSSSLSCLLATIVMWC-TGQVL 102


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 273 ELLFELTDKPDLDLLKGLQFRHRHIDDDR 187
           ELLFE    P LDLLK +     +I  D+
Sbjct: 96  ELLFEGVKDPLLDLLKTINSTSLNIPFDK 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,999
Number of Sequences: 2352
Number of extensions: 11272
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)