Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_B23
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   295   4e-80
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   295   4e-80
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   295   4e-80
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   295   4e-80
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   254   7e-68
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   254   7e-68
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    30   2.9  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  295 bits (723), Expect = 4e-80
 Identities = 143/190 (75%), Positives = 164/190 (86%)
 Frame = +1

Query: 25  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 204
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 205 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 384
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 385 VYDAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGRE 564
           VYDAIL DLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVY KLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 565 VTFEFPEPYL 594
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  295 bits (723), Expect = 4e-80
 Identities = 143/190 (75%), Positives = 164/190 (86%)
 Frame = +1

Query: 25  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 204
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 205 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 384
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 385 VYDAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGRE 564
           VYDAIL DLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVY KLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 565 VTFEFPEPYL 594
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  295 bits (723), Expect = 4e-80
 Identities = 143/190 (75%), Positives = 164/190 (86%)
 Frame = +1

Query: 25  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 204
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 205 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 384
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 385 VYDAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGRE 564
           VYDAIL DLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVY KLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 565 VTFEFPEPYL 594
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  295 bits (723), Expect = 4e-80
 Identities = 143/190 (75%), Positives = 164/190 (86%)
 Frame = +1

Query: 25  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 204
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 205 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 384
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 385 VYDAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYXKLTGRE 564
           VYDAIL DLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVY KLTGR+
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRD 182

Query: 565 VTFEFPEPYL 594
           VTFEFP+ YL
Sbjct: 183 VTFEFPDNYL 192


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  254 bits (622), Expect = 7e-68
 Identities = 124/166 (74%), Positives = 143/166 (86%)
 Frame = +1

Query: 25  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 204
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 205 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 384
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 385 VYDAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 522
           VYDAIL DLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  254 bits (622), Expect = 7e-68
 Identities = 124/166 (74%), Positives = 143/166 (86%)
 Frame = +1

Query: 25  MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 204
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 205 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTS 384
           P+P+ K FQKIQI LVRELEKKFSGKHVV + +RKILPKP+ K R   KQKRPRS TLT+
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTA 122

Query: 385 VYDAILXDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 522
           VYDAIL DLVFPAEIVGKRIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 123 VYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/66 (27%), Positives = 35/66 (53%)
 Frame = +1

Query: 178 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 357
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 358 RPRSXT 375
           +P + T
Sbjct: 625 QPVAQT 630


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,425,700
Number of Sequences: 53049
Number of extensions: 494530
Number of successful extensions: 1141
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)