Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_B20
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.0  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    25   2.7  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 12   QLPSVVIGGSLTNKMSSKVSR*HALRA 92
            Q PS+  GG++  K+ +K SR  AL+A
Sbjct: 1382 QQPSLTTGGAVPFKLLTKKSRDQALKA 1408


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 523 LMVPLTSSXLCVMDSWWERRPGNLPALFKPGPNKTGNLLDQ 401
           L + L    +  + + WE+R G+L A  K   +   +L+D+
Sbjct: 172 LQIALEKEAMLALINVWEQRDGSLRARVKLSRSDANHLIDK 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,327
Number of Sequences: 2352
Number of extensions: 11615
Number of successful extensions: 39
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)