Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_B18
(488 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate... 161 1e-38
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;... 155 4e-37
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/... 148 8e-35
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular... 146 2e-34
UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal ... 93 2e-18
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam... 93 2e-18
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar... 86 3e-16
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T... 79 7e-14
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:... 75 6e-13
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell... 75 1e-12
UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Meta... 73 3e-12
UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:... 71 2e-11
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha... 62 6e-09
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ... 62 9e-09
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa... 54 2e-06
UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 51 2e-05
UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;... 48 8e-05
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu... 48 1e-04
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar... 47 2e-04
UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal ... 46 5e-04
UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9; Euryar... 46 5e-04
UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:... 45 8e-04
UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13; Archa... 45 0.001
UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus... 44 0.001
UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Re... 44 0.002
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact... 42 0.010
UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 39 0.052
UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole gen... 32 6.0
UniRef50_Q6IGP2 Cluster: HDC05802; n=1; Drosophila melanogaster|... 32 6.0
>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
(Human)
Length = 84
Score = 161 bits (390), Expect = 1e-38
Identities = 70/84 (83%), Positives = 74/84 (88%)
Frame = +2
Query: 35 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 214
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 215 TILCQPTGGRAXLTEGCSFXRKQH 286
T+LCQPTGG+A LTEGCSF RKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
protein - Homo sapiens (Human)
Length = 84
Score = 155 bits (377), Expect = 4e-37
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +2
Query: 35 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 214
MPLA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 215 TILCQPTGGRAXLTEGCSFXRKQH 286
T+LCQPTGG+A LTEGCSF RKQH
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
Neurospora crassa
Length = 82
Score = 148 bits (358), Expect = 8e-35
Identities = 64/82 (78%), Positives = 72/82 (87%)
Frame = +2
Query: 35 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 214
M LA+DLL+PSPASE RKHKLK LVP P S+FMDVKCPGC+ ITTVFSHAQ VV+C GC+
Sbjct: 1 MVLAVDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCT 60
Query: 215 TILCQPTGGRAXLTEGCSFXRK 280
T+LCQPTGG+A LTEGCSF RK
Sbjct: 61 TVLCQPTGGKARLTEGCSFRRK 82
>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
Nasonia vitripennis
Length = 2064
Score = 146 bits (354), Expect = 2e-34
Identities = 64/83 (77%), Positives = 69/83 (83%)
Frame = +2
Query: 32 TMPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGC 211
+MPLA D LHPSPA E+RKHKLKRLV PNSYFMDVKCPGCY I T+FSHAQR V C GC
Sbjct: 1979 SMPLAKDFLHPSPAEEKRKHKLKRLVQKPNSYFMDVKCPGCYAIKTIFSHAQRPVECDGC 2038
Query: 212 STILCQPTGGRAXLTEGCSFXRK 280
TILC PTGG+A LTEGCSF +K
Sbjct: 2039 RTILCTPTGGKARLTEGCSFRKK 2061
>UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein S27 - Canis familiaris
Length = 115
Score = 93.5 bits (222), Expect = 2e-18
Identities = 45/64 (70%), Positives = 50/64 (78%)
Frame = +2
Query: 35 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 214
MPL DLLHPSP ++RKHK K LV PNSYFMD+KCPGCYKITTVFSHAQ VV+ A
Sbjct: 1 MPLVKDLLHPSP-EKKRKHKKKHLVQSPNSYFMDMKCPGCYKITTVFSHAQTVVLKA--Q 57
Query: 215 TILC 226
T+ C
Sbjct: 58 TLRC 61
>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
lamblia ATCC 50803
Length = 81
Score = 93.5 bits (222), Expect = 2e-18
Identities = 38/70 (54%), Positives = 49/70 (70%)
Frame = +2
Query: 47 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 226
+DLL+P P E+RKHKLKRLV PNSYF+++KC GC I V+SHA V C GC++ +
Sbjct: 3 VDLLYPDPVEEQRKHKLKRLVQGPNSYFLEIKCAGCQDIVVVYSHANTPVFCPGCTSQIS 62
Query: 227 QPTGGRAXLT 256
PTGG+ T
Sbjct: 63 IPTGGKCAFT 72
>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
theta|Rep: 40S ribosomal protein S27 - Guillardia theta
(Cryptomonas phi)
Length = 81
Score = 86.2 bits (204), Expect = 3e-16
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +2
Query: 77 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 256
E+ KHK KR++P+PNSYF+++ C C +FSH+Q +VC C+ LC PTGG+A L
Sbjct: 14 EKMKHKKKRIIPNPNSYFINIICKNCKNKNIIFSHSQTKIVCKNCALNLCYPTGGKARLI 73
Query: 257 EGCSFXR 277
+GC F R
Sbjct: 74 KGCKFSR 80
>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
putative - Trichomonas vaginalis G3
Length = 86
Score = 78.6 bits (185), Expect = 7e-14
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = +2
Query: 41 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 220
L +D+LHPS E +K K LVP+P S F+ ++CP C +TT FSH+ V C C T
Sbjct: 4 LDVDILHPSVEQEAHTNKKKTLVPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTP 63
Query: 221 LCQPTGGRAXLTE 259
L PTGGR L +
Sbjct: 64 LATPTGGRILLAD 76
>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
LRRGT00170 - Rattus norvegicus (Rat)
Length = 496
Score = 75.4 bits (177), Expect = 6e-13
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +2
Query: 77 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPT 235
E+RKHK K LV P+SYFMDVK GCYK+ +FS VV+ GCST+ CQPT
Sbjct: 202 EKRKHKKKHLVQSPSSYFMDVKYLGCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254
>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
natans|Rep: Ribosomal protein S27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 93
Score = 74.5 bits (175), Expect = 1e-12
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +2
Query: 47 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 226
+DL +PS +E +KHKLKRL+ PNS+++ KC C KI +FSH+ C CST+L
Sbjct: 8 LDLSNPSKKTEAKKHKLKRLIQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLT 67
Query: 227 QPTGGR 244
+P+GG+
Sbjct: 68 RPSGGK 73
>UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Metazoa
group|Rep: Ribosomal protein S27 - Homo sapiens (Human)
Length = 66
Score = 73.3 bits (172), Expect = 3e-12
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +2
Query: 35 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 151
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPG
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:
LRRGT00162 - Rattus norvegicus (Rat)
Length = 291
Score = 70.5 bits (165), Expect = 2e-11
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +2
Query: 32 TMPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 199
TM L L + E+RKHK +RLV PNSYFMDV+CPG Y+ITTVFS AQ VV+
Sbjct: 166 TMKLRRVCLQTAAKEEQRKHKKRRLVQSPNSYFMDVQCPGRYEITTVFSRAQTVVL 221
>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
- Encephalitozoon cuniculi
Length = 85
Score = 62.1 bits (144), Expect = 6e-09
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = +2
Query: 41 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 220
+A DL P+ +K RL N +FM V+C GC T +SH+Q + C GC I
Sbjct: 1 MASDLAFPTREKVGSTYKKDRLYREGNGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDI 60
Query: 221 LCQPTGGRAXLTEGCSFXR 277
+ +GGRA ++ C F +
Sbjct: 61 ILTSSGGRAVVSPNCEFKK 79
>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 217
Score = 61.7 bits (143), Expect = 9e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2
Query: 50 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 199
DLL+P E++K+K KRL+ PNSYFMDVKC C I +FS+AQ ++
Sbjct: 4 DLLNPIYEEEKQKNKFKRLIQAPNSYFMDVKCAQCQNIQMIFSNAQSTII 53
Score = 35.9 bits (79), Expect = 0.48
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 209 CSTILCQPTGGRAXLTEGCSFXRK 280
CS ILC+PTGG+ + GC+F K
Sbjct: 193 CSAILCKPTGGKVQIQAGCAFKIK 216
>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
aerophilum
Length = 67
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +2
Query: 98 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 253
K L+P P S F+ +CP C FSHA VV C C +L PTGG+A L
Sbjct: 7 KVLIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58
>UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4;
Thermoprotei|Rep: 30S ribosomal protein S27e - Aeropyrum
pernix
Length = 73
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +2
Query: 98 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 253
K L+P P S F+ V CP C VFSH+ C C +L +PTGG+A +
Sbjct: 13 KVLIPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKARI 64
>UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YKL156C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 38
Score = 48.4 bits (110), Expect = 8e-05
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -3
Query: 153 QPGHLTSMK*ELGCGTSRLSLCFLLSDAGEGCNKS 49
QPGHLTS K +LG T+ +LCFL S+A GCNKS
Sbjct: 4 QPGHLTSRKYDLGPWTNVFNLCFLASEAAVGCNKS 38
>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
symbiosum
Length = 224
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +2
Query: 107 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 253
VP P S F+ ++C C T V+S A+ V C C +L +P GG+A L
Sbjct: 8 VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL 56
>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Halobacterium salinarium (Halobacterium halobium)
Length = 57
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +2
Query: 128 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 253
F +V+CP C TVF A V CA C T L +PTGG A L
Sbjct: 5 FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46
>UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Homo sapiens|Rep: PREDICTED: similar
to ribosomal protein S27 - Homo sapiens
Length = 83
Score = 46.0 bits (104), Expect = 5e-04
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = +2
Query: 35 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGC 211
MPL DL HP +RR KRLV + Y MDVKC GC K V+ VV C C
Sbjct: 1 MPLTKDLPHPL---QRRSGNKKRLVQSQDCYVMDVKCSGCPKAAVVWEFC--VVDCPAC 54
>UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Pyrococcus furiosus
Length = 63
Score = 46.0 bits (104), Expect = 5e-04
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +2
Query: 98 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 244
K ++P P S F+ VKC C VFSH V C C L +PTGG+
Sbjct: 3 KPIIPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51
>UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:
LRRGT00168 - Rattus norvegicus (Rat)
Length = 109
Score = 45.2 bits (102), Expect = 8e-04
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 38 PLAIDLLHPSPASERRKHKLKRLVPHPNSYFMD 136
PLA DL HP P E+RK+K KRLV PNSYF++
Sbjct: 8 PLAKDL-HPCPEEEKRKYKKKRLVQSPNSYFVE 39
>UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13;
Archaea|Rep: 30S ribosomal protein S27e - Methanopyrus
kandleri
Length = 73
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 104 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 253
LVP P S F+ V+C C +F +A V C C L +PTGG+A +
Sbjct: 15 LVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKI 64
>UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S27E - Candidatus Nitrosopumilus maritimus SCM1
Length = 65
Score = 44.4 bits (100), Expect = 0.001
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 107 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 253
+P P+S F V C C ++ V+SHA V C C + + TG +A +
Sbjct: 8 IPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKAKI 56
>UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Rep:
Cxpwmw06 - Periplaneta americana (American cockroach)
Length = 54
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -2
Query: 286 MLFSXKRXXXXXXXXXXXXXTKDR*ASSADHHSLCVTKNCCNLVTARALNIHEI 125
MLFS KR T+DR S +++LC+T++ C+LV RAL++H++
Sbjct: 1 MLFSSKRATFSESRPATCWLTQDRRTSCTHYYTLCMTEHRCDLVATRALHVHKV 54
>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
Halobacteriaceae|Rep: Ribosomal protein S27.eR -
Haloquadratum walsbyi (strain DSM 16790)
Length = 75
Score = 41.5 bits (93), Expect = 0.010
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +2
Query: 128 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 247
F ++CP C +F A VV CA C T L PTGG A
Sbjct: 5 FYQLQCPDCNNEQVIFGKASTVVNCAVCGTTLATPTGGDA 44
>UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S27e -
Thermoplasma acidophilum
Length = 65
Score = 39.1 bits (87), Expect = 0.052
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 119 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 241
N +F+ +KC C + VF+ V C C + +PTGG
Sbjct: 13 NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53
>UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 302
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 119 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTG 238
N++ + CP C + + ++V CAGC I+ QP G
Sbjct: 239 NNFVIKGNCPACRR--QFIGYKNQIVRCAGCGNIVWQPKG 276
>UniRef50_Q6IGP2 Cluster: HDC05802; n=1; Drosophila
melanogaster|Rep: HDC05802 - Drosophila melanogaster
(Fruit fly)
Length = 184
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 3 PFPGCALKL*PCR-SQLICCILPLRRRGGNISLSG*CHIL--TLISWMLSAL 149
P PG CR SQ +CC+L ++ LS CH+L ++ W A+
Sbjct: 49 PHPGPTFARSSCRVSQFVCCLLTASLALSSVDLSHFCHLLFDSICMWFADAM 100
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,544,030
Number of Sequences: 1657284
Number of extensions: 6875090
Number of successful extensions: 15310
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 15025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15308
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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