Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_B17
(508 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137; Eukar... 223 1e-57
UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58; Eukary... 206 2e-52
UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal ... 140 2e-32
UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e cont... 121 1e-26
UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia... 107 1e-22
UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative; ... 99 5e-20
UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1; Encepha... 95 8e-19
UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9; Euryar... 92 8e-18
UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p... 90 2e-17
UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4; Euryar... 89 7e-17
UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4; Thermo... 87 2e-16
UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11; Archa... 86 4e-16
UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, wh... 82 6e-15
UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10; Archa... 82 8e-15
UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4; Methan... 81 1e-14
UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 75 1e-12
UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n... 73 5e-12
UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5; Haloba... 72 9e-12
UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiell... 68 1e-10
UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1; uncul... 66 4e-10
UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1; Nanoar... 62 5e-09
UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2; Thermo... 61 1e-08
UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory ... 58 1e-07
UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza ... 51 2e-05
UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole geno... 48 9e-05
UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14; Bacter... 47 3e-04
UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia... 46 5e-04
UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, wh... 35 0.92
UniRef50_Q24CF1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 33 2.8
UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4; Endopterygota|... 33 3.7
UniRef50_Q22HC8 Cluster: Kinesin motor domain containing protein... 33 3.7
UniRef50_Q4FQV4 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium lot... 32 6.5
UniRef50_A6LXE0 Cluster: Putative uncharacterized protein precur... 32 8.6
UniRef50_Q7RQE1 Cluster: Protein factor associated with neutral-... 32 8.6
UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, wh... 32 8.6
>UniRef50_P41094 Cluster: 40S ribosomal protein S18; n=137;
Eukaryota|Rep: 40S ribosomal protein S18 - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 223 bits (546), Expect = 1e-57
Identities = 103/131 (78%), Positives = 114/131 (87%)
Frame = +3
Query: 57 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 236
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 237 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAH 416
E EV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDS IR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 417 RGMRHYWGLRV 449
RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131
>UniRef50_P62269 Cluster: 40S ribosomal protein S18; n=58;
Eukaryota|Rep: 40S ribosomal protein S18 - Homo sapiens
(Human)
Length = 152
Score = 206 bits (504), Expect = 2e-52
Identities = 92/131 (70%), Positives = 111/131 (84%)
Frame = +3
Query: 57 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 236
MSLVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE T
Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELT 60
Query: 237 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAH 416
E EVE++ITIM NP QYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+ IRAH
Sbjct: 61 EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120
Query: 417 RGMRHYWGLRV 449
RG+RH+WGLRV
Sbjct: 121 RGLRHFWGLRV 131
>UniRef50_UPI00001C91B1 Cluster: PREDICTED: similar to ribosomal
protein S18; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S18 - Rattus norvegicus
Length = 170
Score = 140 bits (338), Expect = 2e-32
Identities = 68/131 (51%), Positives = 93/131 (70%)
Frame = +3
Query: 57 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 236
MSLVI +K QHIL+++NTNID +++ FA+TA KG +RY+++VL+KA IDL K AGE T
Sbjct: 1 MSLVISEKSQHILQVLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELT 60
Query: 237 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAH 416
E +VE++ITIM NP QY+IP QK + DG+ SQ+ ++ LD+ IRAH
Sbjct: 61 EDKVERVITIMQNPRQYEIP------QKGVRDGRCSQVPANGLDNKLREELERLKKIRAH 114
Query: 417 RGMRHYWGLRV 449
RG+RH+WGL V
Sbjct: 115 RGLRHFWGLHV 125
>UniRef50_UPI00006CC3CE Cluster: ribosomal protein S13p/S18e
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ribosomal protein S13p/S18e containing
protein - Tetrahymena thermophila SB210
Length = 155
Score = 121 bits (291), Expect = 1e-26
Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 2/133 (1%)
Frame = +3
Query: 57 MSLVIPDK--FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 230
MS VI + F++I RI+NTNIDGKR A+T I+G+GRR++ I+ K ID + RAG
Sbjct: 1 MSFVIEKESDFKYIHRILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGL 60
Query: 231 CTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIR 410
TE + KI ++++P + IP W LNR D DGK Q+ S+ LD+ I+
Sbjct: 61 LTEDQCNKITDLIADPEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIK 120
Query: 411 AHRGMRHYWGLRV 449
+HRG+RH+WGL+V
Sbjct: 121 SHRGLRHFWGLKV 133
>UniRef50_Q7QRY7 Cluster: GLP_549_8004_7540; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_8004_7540 - Giardia lamblia ATCC
50803
Length = 154
Score = 107 bits (258), Expect = 1e-22
Identities = 49/130 (37%), Positives = 77/130 (59%)
Frame = +3
Query: 60 SLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTE 239
++V P+ ++ +LR+ NTNI GK + A+ IKG+GRR++N+ LKKA+ID+ KRAGE T
Sbjct: 3 TIVQPNDYRDLLRMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTA 62
Query: 240 XEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHR 419
E + ++ ++ +P + IP W LNR D GK + + + S R R
Sbjct: 63 AEEDALMKVLEDPLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCER 122
Query: 420 GMRHYWGLRV 449
G+RH+ L+V
Sbjct: 123 GVRHHHNLKV 132
>UniRef50_A2E0E1 Cluster: Ribosomal protein S13p/S18e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S13p/S18e, putative - Trichomonas vaginalis G3
Length = 155
Score = 99.1 bits (236), Expect = 5e-20
Identities = 45/126 (35%), Positives = 79/126 (62%)
Frame = +3
Query: 72 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVE 251
P F+ ++R+++TN+DG+R + A+T I G+GRR++ V+++A +D +RAG T E E
Sbjct: 8 PAAFRDMVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEE 67
Query: 252 KIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRH 431
I++I+ NP +++IP W LNR+ D G+ + +++L + +R RG+RH
Sbjct: 68 LIVSIIQNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRH 127
Query: 432 YWGLRV 449
GL+V
Sbjct: 128 GLGLKV 133
>UniRef50_Q8SRP2 Cluster: 40S ribosomal protein S18; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S18
- Encephalitozoon cuniculi
Length = 153
Score = 95.1 bits (226), Expect = 8e-19
Identities = 43/100 (43%), Positives = 67/100 (67%)
Frame = +3
Query: 72 PDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVE 251
P + Q+I+RI NTNIDG +++ FA+T I+G+G R + + K+ IDL KRAGE E E++
Sbjct: 7 PAEVQYIVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMK 66
Query: 252 KIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDS 371
+I + +P IP+ ++N Q+DI+DG S L + LD+
Sbjct: 67 RISDAILDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDA 106
>UniRef50_P54019 Cluster: 30S ribosomal protein S13P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanococcus jannaschii
Length = 150
Score = 91.9 bits (218), Expect = 8e-18
Identities = 42/122 (34%), Positives = 73/122 (59%)
Frame = +3
Query: 78 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKI 257
+F++++R+ T++DG +K++ A+ I GVG + +++ A +D +K AG TE EV+KI
Sbjct: 5 EFKYLIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKI 64
Query: 258 ITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHYW 437
++++P ++ IP W NR+KD V G+ + S+L IR +RG+RH
Sbjct: 65 EEVLADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHEL 124
Query: 438 GL 443
GL
Sbjct: 125 GL 126
>UniRef50_Q4V607 Cluster: IP07925p; n=3; Sophophora|Rep: IP07925p -
Drosophila melanogaster (Fruit fly)
Length = 246
Score = 90.2 bits (214), Expect = 2e-17
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = +3
Query: 153 IKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSNPXQYKIP 296
IKGVGRRYSNIVLKKAD+DL KRAGECTE EV+K++TI+SNP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>UniRef50_Q8TRR2 Cluster: 30S ribosomal protein S13P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S13P -
Methanosarcina acetivorans
Length = 162
Score = 88.6 bits (210), Expect = 7e-17
Identities = 43/125 (34%), Positives = 71/125 (56%)
Frame = +3
Query: 75 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 254
++ +H++RIMNT++ G + V +A+T + GVGRR + ++ K A +D G E EV K
Sbjct: 18 EELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAK 77
Query: 255 IITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHY 434
+ T + + +P W LNRQKD+ G+ L +++ +RA+RG+RH
Sbjct: 78 LDTAIGK-FEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHE 136
Query: 435 WGLRV 449
GL+V
Sbjct: 137 RGLKV 141
>UniRef50_Q9HJD6 Cluster: 30S ribosomal protein S13P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S13P -
Thermoplasma acidophilum
Length = 171
Score = 87.0 bits (206), Expect = 2e-16
Identities = 39/123 (31%), Positives = 75/123 (60%)
Frame = +3
Query: 81 FQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKII 260
FQ+I+RI N +++G+R + A++ +KG+G R ++ ++ D+ +DK+ GE E ++EK+
Sbjct: 28 FQYIVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLR 87
Query: 261 TIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHYWG 440
+ +Y +P+W LN +++ V GK L S++L+ IR+++G+RH G
Sbjct: 88 EYV-EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKG 146
Query: 441 LRV 449
+V
Sbjct: 147 KKV 149
>UniRef50_Q0W1V6 Cluster: 30S ribosomal protein S13P; n=11;
Archaea|Rep: 30S ribosomal protein S13P - Uncultured
methanogenic archaeon RC-I
Length = 224
Score = 86.2 bits (204), Expect = 4e-16
Identities = 42/125 (33%), Positives = 71/125 (56%)
Frame = +3
Query: 75 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 254
D+ ++I+RI NT++DG + V FA+T IKG+G R S I+ ++A +D G +V+K
Sbjct: 67 DEIKYIVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDK 126
Query: 255 IITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHY 434
+ ++ N + +P W LNR++DI G+ L +L IR+++G+RH
Sbjct: 127 LRAVIDN-LEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHE 185
Query: 435 WGLRV 449
G +V
Sbjct: 186 RGQKV 190
>UniRef50_A0EBZ1 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 193
Score = 82.2 bits (194), Expect = 6e-15
Identities = 46/134 (34%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Frame = +3
Query: 57 MSLVIP--DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGE 230
MSLV+ D+F+ I+RI+NTN+DGK+++ + + +IKG+GRR++ + K ++L KRAGE
Sbjct: 1 MSLVLEKADQFRQIIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGE 60
Query: 231 CTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIR 410
T+ E KI ++ QY +D+ +GK ++T++ L++ I+
Sbjct: 61 LTDEEAHKITEVIKMVPQY---------IRDLKNGKNYEVTTNELETKLREDLERIKKIK 111
Query: 411 AHRG--MRHYWGLR 446
+ +RH+WGLR
Sbjct: 112 YSQWLCLRHHWGLR 125
>UniRef50_Q96YV7 Cluster: 30S ribosomal protein S13P; n=10;
Archaea|Rep: 30S ribosomal protein S13P - Sulfolobus
tokodaii
Length = 172
Score = 81.8 bits (193), Expect = 8e-15
Identities = 37/124 (29%), Positives = 71/124 (57%)
Frame = +3
Query: 78 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKI 257
+F++I+R+ ++DG KV +A+ +KG+G + ++ K +D D+R GE ++ +++KI
Sbjct: 6 QFKYIVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKI 65
Query: 258 ITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHYW 437
+++ ++P+W NR+KD G L +S+L I++ RG+RH
Sbjct: 66 ENYLTDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSL 125
Query: 438 GLRV 449
GL+V
Sbjct: 126 GLKV 129
>UniRef50_Q6LXN1 Cluster: 30S ribosomal protein S13P; n=4;
Methanococcus|Rep: 30S ribosomal protein S13P -
Methanococcus maripaludis
Length = 149
Score = 81.4 bits (192), Expect = 1e-14
Identities = 35/118 (29%), Positives = 67/118 (56%)
Frame = +3
Query: 78 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKI 257
+F+H +RI T+++GK + +A+ +KG+GR + V++ ++D ++AG + +V KI
Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKI 64
Query: 258 ITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRH 431
+++ +P + IP W NR+KD+ G L ++L IR ++G+RH
Sbjct: 65 ESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRH 122
>UniRef50_A0RY01 Cluster: 30S ribosomal protein S13P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S13P -
Cenarchaeum symbiosum
Length = 227
Score = 74.5 bits (175), Expect = 1e-12
Identities = 33/124 (26%), Positives = 67/124 (54%)
Frame = +3
Query: 78 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKI 257
+++HI+RI+ ++ G++K + + I+G+G ++ +L ID + G T+ +V I
Sbjct: 50 EYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASI 109
Query: 258 ITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHYW 437
++ +P P WFLNR+KD+ G+ + +S+++ + +G RH +
Sbjct: 110 EKLLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMF 169
Query: 438 GLRV 449
GL+V
Sbjct: 170 GLKV 173
>UniRef50_Q00VP7 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 272
Score = 72.5 bits (170), Expect = 5e-12
Identities = 41/135 (30%), Positives = 68/135 (50%)
Frame = -3
Query: 461 VLTTHTKAPVMSHPSVSANLXEPLQXFTEF*IQVGGGQLAVFTINNILLPI*EPVWYLIL 282
VLTT T APV+S SV +NL + L+ + +++ G L I I+L + EP+ L
Sbjct: 44 VLTTDTDAPVVSQTSVVSNLLQTLEVVAQLRVELVGHHLRELAILEIVLAVQEPIRNSEL 103
Query: 281 XRIRHDSDNFFNLXFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLSFAIDVRIH 102
R+ HD F L L +I++ F + VG A+ D H+L ++V +
Sbjct: 104 SRVGHDHHQRFQLRGGELPGALPEIDLSLFAHQVGEAAADPLDLGQGVHHLLTTVNVGVE 163
Query: 101 DTKNMLKFVWNDQRH 57
D ++L+ + +D+ H
Sbjct: 164 DADDVLEIITDDEAH 178
>UniRef50_Q00861 Cluster: 30S ribosomal protein S13P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 71.7 bits (168), Expect = 9e-12
Identities = 35/125 (28%), Positives = 66/125 (52%)
Frame = +3
Query: 75 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 254
+ ++ +RI T++DG + V A+T + G+G R + I+ +KAD+D G+ + +E+
Sbjct: 18 EDIRYFVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIER 77
Query: 255 IITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHY 434
++ + N +P+W N QKD G+ + T ++L I ++RG+RH
Sbjct: 78 VVERVENFAD-DVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHK 136
Query: 435 WGLRV 449
G +V
Sbjct: 137 RGQKV 141
>UniRef50_Q3LW54 Cluster: Ribosomal protein S18; n=1; Bigelowiella
natans|Rep: Ribosomal protein S18 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 159
Score = 68.1 bits (159), Expect = 1e-10
Identities = 33/119 (27%), Positives = 59/119 (49%)
Frame = +3
Query: 75 DKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEK 254
+K +RI + NI+G F + IKGVG R SN++ K D++ + + ++E+
Sbjct: 13 EKSMTFIRIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEE 72
Query: 255 IITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRH 431
++ I + P W +NR+ D + G + S+ LDS I+ ++G+RH
Sbjct: 73 VVNIFGKSSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRH 131
>UniRef50_A0SNY5 Cluster: SSU ribosomal protein S13AB; n=1;
uncultured euryarchaeote ARMAN-2|Rep: SSU ribosomal
protein S13AB - uncultured euryarchaeote ARMAN-2
Length = 177
Score = 66.1 bits (154), Expect = 4e-10
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Frame = +3
Query: 78 KFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN----IVLKKADIDLDKRAGECTEXE 245
K I+RI N +I+G + A+ +KG+G+ S+ ++ K +ID G E +
Sbjct: 15 KAMSIVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQ 74
Query: 246 VEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGM 425
V ++ ++ +P +Y +P + LNR+ D+ GK L ++L +R RG
Sbjct: 75 VTQVEELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGY 134
Query: 426 RHYWGLRV 449
RH +G +V
Sbjct: 135 RHQYGQKV 142
>UniRef50_Q74M95 Cluster: 30S ribosomal protein S13P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S13P -
Nanoarchaeum equitans
Length = 153
Score = 62.5 bits (145), Expect = 5e-09
Identities = 33/120 (27%), Positives = 57/120 (47%)
Frame = +3
Query: 90 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIM 269
I+ I + ++DG + + + + GV +++ V ID ++ G ++ E+EK+ +
Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72
Query: 270 SNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHYWGLRV 449
NP +Y IP W NR++D GK L ++ I + RG RH GL V
Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132
>UniRef50_A4WM28 Cluster: 30S ribosomal protein S13P; n=2;
Thermoproteaceae|Rep: 30S ribosomal protein S13P -
Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321)
Length = 152
Score = 61.3 bits (142), Expect = 1e-08
Identities = 34/120 (28%), Positives = 61/120 (50%)
Frame = +3
Query: 90 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIM 269
I+R+ +T+++G ++V +A+ I+G+G + + K ID G E ++ K+ +
Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67
Query: 270 SNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHYWGLRV 449
N + P WFLNR+KD G+ L S L +++ +G+RH GL+V
Sbjct: 68 RNLHEVA-PAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKV 126
>UniRef50_UPI0001555DA0 Cluster: PREDICTED: similar to olfactory
specific medium-chain acyl CoA synthetase; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
olfactory specific medium-chain acyl CoA synthetase -
Ornithorhynchus anatinus
Length = 176
Score = 58.0 bits (134), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 267 MSNPXQYKIPDWFLNRQKDIVDGKYSQL 350
M NP QYKIPDWFLNRQKD+ DGKYSQ+
Sbjct: 1 MQNPRQYKIPDWFLNRQKDVKDGKYSQV 28
>UniRef50_Q8H583 Cluster: Ribosomal protein S18-like; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Ribosomal protein
S18-like - Oryza sativa subsp. japonica (Rice)
Length = 145
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +3
Query: 312 RQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAHRGMRHYWGLRV 449
++KD DG++SQ+ S+ LD IR HRG+RHYWGLRV
Sbjct: 79 QKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 124
>UniRef50_A7PUB9 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 48
Score = 48.4 bits (110), Expect = 9e-05
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 47 LNQNVAGHSRQISTYSSYHEYEHRWQTKGYVCDDGYQRCWP 169
L+ +V G R IST++S ++E RW+T+ +VC D +QR WP
Sbjct: 5 LSMSVLGSERGISTHTSCAQHERRWETEDHVCSDLHQRYWP 45
>UniRef50_Q9X1I5 Cluster: 30S ribosomal protein S13; n=14;
Bacteria|Rep: 30S ribosomal protein S13 - Thermotoga
maritima
Length = 125
Score = 46.8 bits (106), Expect = 3e-04
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +3
Query: 96 RIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKI 257
RI+ + +KV A+T I G+GR S +LK ID +KR G+ T+ E+ KI
Sbjct: 3 RIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKI 56
>UniRef50_Q7QRY8 Cluster: GLP_549_7513_8304; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_549_7513_8304 - Giardia lamblia ATCC
50803
Length = 263
Score = 46.0 bits (104), Expect = 5e-04
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = -3
Query: 461 VLTTHTKAPVMSHPSVSANLXEPLQXFTEF*IQVGGG---QLAVFTINNILLPI*EPVWY 291
VL + + V++ +++A+ E LQ T + G G + VF I++ I P W
Sbjct: 29 VLPANLQVVVVADTALAASFTETLQVRT---VGRGYGIDQNVHVFARFKIIVTIKHPGWN 85
Query: 290 LILXRIRHDSDNFFNLXFCAFASTLVKINVGFFENNVGVPPANTFDSRHRKHNLSFAIDV 111
+ + D L C S V +NVGF E N+G N +S A+DV
Sbjct: 86 AVGEGVLKDLHESILLGRCELTSAFVNVNVGFLEGNIGKAAPNPLNSDKGTLKYDLALDV 145
Query: 110 RIHDTKNMLKFV-WNDQRH 57
+ T+ + V ND+ H
Sbjct: 146 CVKHTQEVPVVVGLNDRCH 164
>UniRef50_A0CSW0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_26,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 367
Score = 35.1 bits (77), Expect = 0.92
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 174 YSNIVLKKADIDLDKRAGECTEXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDG 335
Y N + D + DK + E + E E++IT++ KI DW +KD+ DG
Sbjct: 93 YQNAIDSAQD-EKDKYSRETLQKEKEELITLICEMKHSKIEDWLKTIKKDLPDG 145
>UniRef50_Q24CF1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 432
Score = 33.9 bits (74), Expect = 2.1
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 9 FPLLLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIV 188
+ LLL L +L L I ++ Q +I N K+KVM A+ I G + N V
Sbjct: 194 YSLLLNLNQNFSHLVLQILFILEQIQQRFKIQNRMKRNKKKVMKALVQILGFNDQIKNTV 253
Query: 189 LKKADIDLDK 218
L++ I++ K
Sbjct: 254 LEEDQINVKK 263
>UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Flavobacterium johnsoniae UW101|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Flavobacterium johnsoniae
UW101
Length = 216
Score = 33.5 bits (73), Expect = 2.8
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +3
Query: 72 PDKFQHILRIMNT--NIDGKRKVMFAMTAIKGVGRRYSNIVLKKAD 203
P K Q +L I +T N + M +TA+KG+GR+ +N++L++ +
Sbjct: 87 PTKAQWLLEIAHTIQNDNDIPLTMSGLTALKGIGRKSANVILRETE 132
>UniRef50_Q7PY55 Cluster: ENSANGP00000013280; n=4;
Endopterygota|Rep: ENSANGP00000013280 - Anopheles
gambiae str. PEST
Length = 183
Score = 33.1 bits (72), Expect = 3.7
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 114 IDGKRKVMFAMTAIKGVGRRYSNIVLK---KADI-DLDKRAGECTEXEVEK 254
+D K KV A G+GR +S +LK K I DLD AGE T E+EK
Sbjct: 1 MDLKNKVALVTGAATGLGRAFSEELLKHGAKVVICDLDSDAGELTVEELEK 51
>UniRef50_Q22HC8 Cluster: Kinesin motor domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Kinesin motor
domain containing protein - Tetrahymena thermophila
SB210
Length = 1633
Score = 33.1 bits (72), Expect = 3.7
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 18 LLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNI-VLK 194
LLCLG +R+L IP + + RI+N + V+ + G+ NI VLK
Sbjct: 414 LLCLGNCIRSLRNGDENIPYRESKLTRILNEYFVDQNNVLMIVHIHPGISYTEENINVLK 473
Query: 195 KADIDLDKR 221
A I L+ +
Sbjct: 474 YAAIGLEAK 482
>UniRef50_Q4FQV4 Cluster: Putative uncharacterized protein; n=2;
Psychrobacter|Rep: Putative uncharacterized protein -
Psychrobacter arcticum
Length = 720
Score = 32.7 bits (71), Expect = 4.9
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 12 PLLLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIV 188
PL TL+R +K S+V P + H + N +DG + F + A K + YSN++
Sbjct: 243 PLSAFAHTLLRIDSKASVVDPSQIHHAYAL-NDTVDGDTEDNFVLYATKSMTGGYSNLI 300
>UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium
loti|Rep: Mll1963 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 315
Score = 32.3 bits (70), Expect = 6.5
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 233 AFASTLVKINVGFFENNVG-VPPANTFDSRHRK-HNLSFAIDVRIHDTKNML 84
AFA T V+ VGF++ VG + +D +K H+ +F DV + DTK L
Sbjct: 23 AFAETPVEPTVGFYKYTVGDIEVTAIYDGIWKKPHDPAFIKDVSVEDTKAAL 74
>UniRef50_A6LXE0 Cluster: Putative uncharacterized protein
precursor; n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Putative uncharacterized protein precursor - Clostridium
beijerinckii NCIMB 8052
Length = 445
Score = 31.9 bits (69), Expect = 8.6
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +3
Query: 162 VGRRYSNIVLKKADIDLDKRAGECTEXEVE----KIITIMSNPXQYKIPDWFLNRQKDIV 329
V +RY+ I+LKK DID K E +++ K+ ++ P Q + LN+ +D +
Sbjct: 148 VTKRYNAIILKKIDIDKLKTGLEIKNNDLDALKIKVSVGLAIPNQLEDKQIELNKAQDEI 207
Query: 330 DGKYSQLTSSNLD 368
K + L +NLD
Sbjct: 208 KAKENSL-KNNLD 219
>UniRef50_Q7RQE1 Cluster: Protein factor associated with
neutral-sphingomyelinase activation; n=3; Plasmodium
(Vinckeia)|Rep: Protein factor associated with
neutral-sphingomyelinase activation - Plasmodium yoelii
yoelii
Length = 1490
Score = 31.9 bits (69), Expect = 8.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 206 NVGFFENNVGVPPANTFDSRHRKHNL 129
N+ F NN PP NTF+ ++K+N+
Sbjct: 1189 NLSQFSNNCATPPINTFEKENQKYNV 1214
>UniRef50_A0DZU7 Cluster: Chromosome undetermined scaffold_70, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_70,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 713
Score = 31.9 bits (69), Expect = 8.6
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 174 YSNIVLKKADIDLDKRAGECTEXEVEKIITIMSNPXQYKIPDWFLNRQK 320
Y + +K ++D K C + E+EK + SNP + W + +K
Sbjct: 533 YMKVQGQKNELDFHKLINSCLDKEIEKNLKNFSNPATIDLYPWMIKYRK 581
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,456,268
Number of Sequences: 1657284
Number of extensions: 9362974
Number of successful extensions: 23503
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 22960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23489
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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