Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_B17
         (508 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   223   8e-59
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   223   8e-59
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   223   8e-59
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   223   8e-59
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   220   8e-58
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    90   1e-18
BT016037-1|AAV36922.1|  447|Drosophila melanogaster LP23579p pro...    28   6.3  
AE014298-2418|AAF48619.1|  454|Drosophila melanogaster CG9903-PA...    28   6.3  

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  223 bits (546), Expect = 8e-59
 Identities = 103/131 (78%), Positives = 114/131 (87%)
 Frame = +3

Query: 57  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 236
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 237 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAH 416
           E EV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDS           IR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 417 RGMRHYWGLRV 449
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  223 bits (546), Expect = 8e-59
 Identities = 103/131 (78%), Positives = 114/131 (87%)
 Frame = +3

Query: 57  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 236
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 237 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAH 416
           E EV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDS           IR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 417 RGMRHYWGLRV 449
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  223 bits (546), Expect = 8e-59
 Identities = 103/131 (78%), Positives = 114/131 (87%)
 Frame = +3

Query: 57  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 236
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 237 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAH 416
           E EV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDS           IR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 417 RGMRHYWGLRV 449
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  223 bits (546), Expect = 8e-59
 Identities = 103/131 (78%), Positives = 114/131 (87%)
 Frame = +3

Query: 57  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 236
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 237 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAH 416
           E EV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDS           IR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 417 RGMRHYWGLRV 449
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  220 bits (538), Expect = 8e-58
 Identities = 102/131 (77%), Positives = 113/131 (86%)
 Frame = +3

Query: 57  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 236
           MSLVIP+KFQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 237 EXEVEKIITIMSNPXQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSXXXXXXXXXXXIRAH 416
           E EV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDS           IR+H
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 417 RGMRHYWGLRV 449
           RG+RHYWGLRV
Sbjct: 121 RGLRHYWGLRV 131


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 90.2 bits (214), Expect = 1e-18
 Identities = 39/48 (81%), Positives = 45/48 (93%)
 Frame = +3

Query: 153 IKGVGRRYSNIVLKKADIDLDKRAGECTEXEVEKIITIMSNPXQYKIP 296
           IKGVGRRYSNIVLKKAD+DL KRAGECTE EV+K++TI+SNP QYK+P
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48


>BT016037-1|AAV36922.1|  447|Drosophila melanogaster LP23579p
           protein.
          Length = 447

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 347 LAVFTINNILLPI*EPVWYLILXRIRHDSD 258
           +A  TIN++L     P+W L+L RI ++ D
Sbjct: 237 VATTTINSLLALALLPIWILVLGRILYEDD 266


>AE014298-2418|AAF48619.1|  454|Drosophila melanogaster CG9903-PA
           protein.
          Length = 454

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 347 LAVFTINNILLPI*EPVWYLILXRIRHDSD 258
           +A  TIN++L     P+W L+L RI ++ D
Sbjct: 244 VATTTINSLLALALLPIWILVLGRILYEDD 273


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,363,656
Number of Sequences: 53049
Number of extensions: 449729
Number of successful extensions: 1114
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)