Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_B07
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   6.4  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   8.4  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   8.4  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 1   RLHDLAAVRILLSSTSNQLILIXNHEAXYITD 96
           RLH+  +    LSS++   + +   E  YITD
Sbjct: 427 RLHETVSSHTCLSSSAEYELALILKELRYITD 458


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
 Frame = -3

Query: 457 CNKL--SAYKTTTSRDQCECVCEC 392
           CN++  S   T   R  C C C+C
Sbjct: 222 CNQITCSGISTEVCRRSCYCGCQC 245


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/22 (31%), Positives = 18/22 (81%)
 Frame = +1

Query: 166 NRRHKLPKQQKRREPQK*HRHL 231
           ++RH+ P+QQ++++ Q+  R++
Sbjct: 244 SQRHRQPQQQQQQQQQQGERYV 265


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,723
Number of Sequences: 2352
Number of extensions: 10167
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)