Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_B05
         (636 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7AK20 Cluster: Putative uncharacterized protein; n=1; ...    36   0.82 
UniRef50_UPI0000F1DD16 Cluster: PREDICTED: hypothetical protein;...    34   3.3  
UniRef50_O74851 Cluster: Protein adg3 precursor; n=1; Schizosacc...    33   7.6  

>UniRef50_A7AK20 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides merdae ATCC 43184|Rep: Putative
           uncharacterized protein - Parabacteroides merdae ATCC
           43184
          Length = 154

 Score = 35.9 bits (79), Expect = 0.82
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 178 VYISYFSKLNVFAMERNKIQFYFXRNKFXQNKS 276
           +Y+ YF K++ F  +R  ++FYF  N + + KS
Sbjct: 117 MYLDYFRKISSFKQDRENVRFYFGENSYLEYKS 149


>UniRef50_UPI0000F1DD16 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 270

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
 Frame = +2

Query: 245 LXETSLXRINLFKEALSSAXN-G-RVLYILHEELSQLP-TLSQDLNSVNRHFMKMISFLY 415
           L + ++ R  LF  A+++A + G +VL+        LP +L   +  +    +K + F+Y
Sbjct: 32  LGDVNISRSVLFLAAVTAATDLGLKVLFFTQGPFQSLPVSLRASVPGLKLESLKNVRFVY 91

Query: 416 VXTIEALIDSVSTL----PDWQNVPSTIILXDLSKFFSRNXXQ 532
             T+E L++ V++L     +  ++PS II+  L ++      Q
Sbjct: 92  AKTLEDLLEDVASLHQLASEAASLPSLIIVDALDQYLQAGPQQ 134


>UniRef50_O74851 Cluster: Protein adg3 precursor; n=1;
            Schizosaccharomyces pombe|Rep: Protein adg3 precursor -
            Schizosaccharomyces pombe (Fission yeast)
          Length = 1131

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
 Frame = +2

Query: 221  NVTKYNSTLXETSLXRINLFKEALSSAXNGRVLYILHEELSQLPTLSQDLNSVNRHFM-- 394
            N+T  +STL  +    ++     ++S+ +   L    +  S   TLS+ ++S+N + +  
Sbjct: 920  NITVTSSTLKPSLTSSVSTASSYIASSASSNTLSTEPKTFSSSSTLSESISSINTNSLTV 979

Query: 395  KMISFLYVXTIEALIDSVSTLP 460
            K  S L   T   L  S ST+P
Sbjct: 980  KPESSLSSSTTSGLTSSSSTIP 1001


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,641,169
Number of Sequences: 1657284
Number of extensions: 8367276
Number of successful extensions: 15997
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15993
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)