Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_B05
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   3.5  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   4.6  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   8.1  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 131  LISCYFCQIFR*RILMFILATSAN*MYLLWNVTKYNSTLXETSLXRINLF 280
            +IS  F ++FR   L+ +LA       LLW   K    L   +L  + LF
Sbjct: 1271 IISINFFRLFRVMRLVKLLARGEGIRTLLWTFIKSFQALPYVALLIVMLF 1320


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +2

Query: 116 NTFYLLISCYFCQIFR*RILMFILATSAN 202
           NT+++L++  FC ++R  + + IL+  AN
Sbjct: 556 NTWFVLLTIIFCSVYR-ILGVLILSALAN 583


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 240 ELYFVTFHSKYIQFAEVANINIKMRYLKIW 151
           E  F  + SK  ++    N+N+  R +KIW
Sbjct: 288 EFLFNAYVSKQKRWELARNLNLTERQVKIW 317


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,281
Number of Sequences: 2352
Number of extensions: 9828
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)