Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP02_F_B03
(518 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 194 1e-48
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 152 5e-36
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 143 2e-33
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 116 3e-25
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 109 3e-23
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 109 5e-23
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 104 1e-21
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 103 2e-21
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 101 7e-21
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 101 7e-21
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 101 1e-20
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 100 2e-20
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 100 4e-20
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 94 2e-18
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 93 5e-18
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 88 1e-16
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 85 9e-16
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 83 3e-15
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 63 3e-09
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 58 1e-07
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 55 1e-06
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 55 1e-06
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 55 1e-06
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 54 2e-06
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 54 2e-06
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 53 3e-06
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 53 5e-06
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 52 8e-06
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 50 4e-05
UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellul... 49 6e-05
UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10; Rickettsia... 49 7e-05
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 49 7e-05
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 48 1e-04
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 48 1e-04
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 48 1e-04
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 48 2e-04
UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19, pu... 48 2e-04
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 48 2e-04
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 47 2e-04
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 47 2e-04
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 47 3e-04
UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellul... 47 3e-04
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 46 4e-04
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 46 5e-04
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 46 5e-04
UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria r... 43 0.005
UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;... 42 0.008
UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|R... 42 0.011
UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum parv... 42 0.011
UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1; Pseudendocl... 40 0.026
UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2; Dictyosteli... 40 0.034
UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1; Oltmannsiel... 39 0.060
UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole gen... 39 0.060
UniRef50_Q06FM4 Cluster: Ribosomal protein S19; n=1; Pelargonium... 39 0.079
UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19; ... 39 0.079
UniRef50_A2DH24 Cluster: Putative uncharacterized protein; n=1; ... 36 0.56
UniRef50_Q6HT65 Cluster: ComE operon protein 1; n=22; Bacillus|R... 34 1.7
UniRef50_Q9G8T6 Cluster: Ribosomal protein S19; n=1; Rhodomonas ... 34 1.7
UniRef50_Q8IB15 Cluster: Putative uncharacterized protein MAL8P1... 33 3.0
UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Re... 33 3.9
UniRef50_Q8HIT4 Cluster: Ribosomal protein S19; n=1; Monosiga br... 33 5.2
UniRef50_Q7YN78 Cluster: Ribosomal protein S19; n=1; Eimeria ten... 33 5.2
UniRef50_Q9MTE4 Cluster: Ribosomal protein S19; n=1; Toxoplasma ... 32 6.8
UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces cere... 32 6.8
UniRef50_Q4UGR2 Cluster: Bromodomain protein, putative; n=1; The... 32 9.0
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 194 bits (473), Expect = 1e-48
Identities = 90/120 (75%), Positives = 102/120 (85%)
Frame = +3
Query: 108 LHMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMII 287
L M EQLM+L GL+RK +L+K+LR+AKKEAPP KPE+VKTHLR+MII
Sbjct: 26 LDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMII 85
Query: 288 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 86 LPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 26 MAEVDETLKKKRIFRKFTYRGVDLDQLL 109
MAEV++ KKKR FRKFTYRGVDLDQLL
Sbjct: 1 MAEVEQ--KKKRTFRKFTYRGVDLDQLL 26
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 152 bits (368), Expect = 5e-36
Identities = 78/140 (55%), Positives = 94/140 (67%)
Frame = +3
Query: 48 SRKSVFSGSSLTGELISISSLHMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK 227
++K VF S G + L M E ++L G+ KP +KKLR AK
Sbjct: 7 AKKRVFKTHSYRGVDLE-KLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKL 65
Query: 228 EAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKP 407
AP N KP V+TH+RNMIIVPEM+GS+VGIYNGK FNQVEI+PEM+GHYLGEFS+TY P
Sbjct: 66 AAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTP 125
Query: 408 VKHGRPGIGATHSSRFIPLK 467
V+HGR GAT +SRFIPLK
Sbjct: 126 VRHGR--AGAT-TSRFIPLK 142
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 143 bits (346), Expect = 2e-33
Identities = 76/146 (52%), Positives = 96/146 (65%), Gaps = 6/146 (4%)
Frame = +3
Query: 48 SRKSVFSGSSLTGELISISSLHMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK 227
++K F S G + + L M N L +L + GLK++P+ L+KKLRRAKK
Sbjct: 16 TKKRTFKKFSFRGFNVD-ALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKK 74
Query: 228 EAPPNXK--PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTY 401
EA K PE+VKTHLRNMIIVPEM+GS+VG++NGK FN++ IKPEMIGHYL EFS+T
Sbjct: 75 EASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTC 134
Query: 402 KPVKHGRPGIGA----THSSRFIPLK 467
K V H RP I S+RFIPL+
Sbjct: 135 KKVNHHRPRICGCCCFRRSTRFIPLR 160
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 116 bits (279), Expect = 3e-25
Identities = 54/98 (55%), Positives = 72/98 (73%)
Frame = +3
Query: 174 GLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 353
GL K + V KLR ++ A P+ KP+IV+THLR+MII PEM+G V +YNG+ F VEI
Sbjct: 49 GLSMKHLRFVNKLR-LRRAAQPSQKPKIVRTHLRDMIIFPEMIGMTVSVYNGRQFIPVEI 107
Query: 354 KPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
KP M+G L E+S++YK V HG+ GIGAT SS+F+PL+
Sbjct: 108 KPPMVGRALREYSMSYKIVSHGKVGIGATRSSKFVPLR 145
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 109 bits (263), Expect = 3e-23
Identities = 52/120 (43%), Positives = 78/120 (65%)
Frame = +3
Query: 108 LHMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMII 287
L+MP ++ ++L+ G K L++K+R+ +E + + +KTH+R+MII
Sbjct: 23 LNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVREGKYS---KTIKTHVRDMII 79
Query: 288 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
+PEMVG +YNGK F + ++ PEMIGHYLGEFS+T K V+HG PG+ AT SS F+ +K
Sbjct: 80 LPEMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSSLFLAMK 139
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 109 bits (261), Expect = 5e-23
Identities = 56/133 (42%), Positives = 79/133 (59%), Gaps = 4/133 (3%)
Frame = +3
Query: 42 KPSRKSVFSGSSLTGELISISS----LHMPNEQLMELMHXXXXXXXXXGLKRKPMALVKK 209
K +K F G L EL +++S + +++L L G+ K V K
Sbjct: 6 KSIKKFTFRGKGLE-ELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 210 LRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 389
+RR+K++ P KP VKTH R+MI++PE+VG IVG+YNGK F VE+K +MIG YL EF
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRSMIVIPELVGGIVGVYNGKEFVNVEVKFDMIGKYLAEF 124
Query: 390 SVTYKPVKHGRPG 428
++TYKP HG+ G
Sbjct: 125 AMTYKPTTHGKTG 137
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 104 bits (249), Expect = 1e-21
Identities = 69/157 (43%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Frame = +3
Query: 12 NKQETWLRSTKPSRKS--VFSGSS--LTGELISISSLH-MPNEQLMELMHXXXXXXXXXG 176
NKQ + + +RKS V SG + T + S+ L M E+L++++
Sbjct: 4 NKQGSVKSIKRKARKSKKVVSGRAKEFTYKGYSLEDLQKMSMEELIKILPARARRT---- 59
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
L R+P KKL K E+ E VKTH+R++II+P VG IV +YNG ++ + EIK
Sbjct: 60 LLREPNYEQKKLME-KLESDE----EDVKTHVRDVIILPNYVGKIVEVYNGNSYFKFEIK 114
Query: 357 PEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
PEMIGHYLGEF +T K VKH PG+GAT SS+F+PLK
Sbjct: 115 PEMIGHYLGEFVMTRKEVKHSGPGVGATRSSKFMPLK 151
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 103 bits (247), Expect = 2e-21
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +3
Query: 258 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA 437
+KTH+RN II P M+ + +YNG +++ +E++ M+G +LGEFS+TYKPVKHG PGIGA
Sbjct: 82 LKTHVRNCIITPSMINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHGNPGIGA 141
Query: 438 THSSRFIPLK 467
THSSRFIPL+
Sbjct: 142 THSSRFIPLR 151
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 101 bits (243), Expect = 7e-21
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Frame = +3
Query: 114 MPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK--EAPPNXKPEIVKTHLRNMII 287
M + +EL+ K + L++KL++A++ E +P +VKTHLR+M+I
Sbjct: 25 MELKDFVELLPTKRRRFISRSFDLKHVHLIEKLKKARQAVEGQAGVRPPVVKTHLRHMVI 84
Query: 288 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
+PE V +++GIY+G F +V+IKPEMIGH L +F+ + K VKH + G+GAT SS LK
Sbjct: 85 LPEFVDNVIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSKAGVGATRSSSATSLK 144
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 101 bits (243), Expect = 7e-21
Identities = 49/118 (41%), Positives = 71/118 (60%)
Frame = +3
Query: 114 MPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVP 293
M E + EL+ GL + ++ + R + E N ++THLR+M ++P
Sbjct: 26 MSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP---IRTHLRDMPVLP 82
Query: 294 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
E VG +Y G+ F +VE++PEMIGHYLGEF +T V+HG+ GIGAT SS+F+PLK
Sbjct: 83 EFVGLTFAVYTGQEFERVEVQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 101 bits (242), Expect = 1e-20
Identities = 52/120 (43%), Positives = 76/120 (63%)
Frame = +3
Query: 108 LHMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMII 287
L+M ++ ++L+ GLK + L++K+R+AK+ A K +++TH R+MII
Sbjct: 40 LNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKV-VIRTHCRDMII 98
Query: 288 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
+PEMVG + +YNG T+ V I P IGHYLGEF++T K V+HG PG+ AT SS I K
Sbjct: 99 LPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 158
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 100 bits (240), Expect = 2e-20
Identities = 43/118 (36%), Positives = 70/118 (59%)
Frame = +3
Query: 114 MPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVP 293
MP ++ ME++ G+ K LV K+++A++ +++TH R+ +I P
Sbjct: 44 MPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDARVIRTHCRDFVITP 103
Query: 294 EMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
EM+G GIYNGK F ++++ E +G +LGE + T V+HG PG+GAT S F+P+K
Sbjct: 104 EMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSPGMGATRGSMFVPIK 161
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 99.5 bits (237), Expect = 4e-20
Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = +3
Query: 114 MPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA-PPNXKPEIVKTHLRNMIIV 290
MP ++ +L GL + + L+K AK + KPE+V+TH R+ II
Sbjct: 31 MPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIAAKAACVSSSSKPEMVRTHARSAIIW 90
Query: 291 PEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
P M+G++VG++ G + VEIKPEM+G L +F+ T KHGRPGIGA+ SS+F+PLK
Sbjct: 91 PAMIGALVGVHVGNGYLPVEIKPEMVGFVLSDFAPTRVTPKHGRPGIGASSSSKFVPLK 149
Score = 33.9 bits (74), Expect = 2.2
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 38 DETLKKKRIFRKFTYRGVDLDQL 106
+E KKKR FR++TYRGV +++L
Sbjct: 6 NEVSKKKRTFRRYTYRGVPVEEL 28
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 93.9 bits (223), Expect = 2e-18
Identities = 51/90 (56%), Positives = 59/90 (65%)
Frame = +3
Query: 198 LVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 377
L KK+ AK+ KP +KTH RN II+P MVG V +YNGK + V+IKPEMIGHY
Sbjct: 55 LFKKILLAKEGK--YKKP--IKTHARNTIILPFMVGVTVHVYNGKEYVPVQIKPEMIGHY 110
Query: 378 LGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
LGEFS T K KH PGIGAT SS + K
Sbjct: 111 LGEFSFTTKRPKHSAPGIGATRSSAHVSKK 140
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 92.7 bits (220), Expect = 5e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +3
Query: 258 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA 437
++TH R+MII+PEM+G + ++NGK F VE++PEMIGH GEF+ T V HG G+GA
Sbjct: 67 IRTHHRDMIILPEMIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGA 126
Query: 438 THSSRFIPLK 467
T SS+F+PLK
Sbjct: 127 TRSSKFVPLK 136
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 88.2 bits (209), Expect = 1e-16
Identities = 37/70 (52%), Positives = 52/70 (74%)
Frame = +3
Query: 258 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA 437
+KTH R++ I+PEMVG +G+++G+ F VEI PEMIGH LGE++ T + V H PG+GA
Sbjct: 104 IKTHCRSLYILPEMVGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHTGPGVGA 163
Query: 438 THSSRFIPLK 467
T SS+ + LK
Sbjct: 164 TRSSKHVALK 173
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 85.0 bits (201), Expect = 9e-16
Identities = 37/60 (61%), Positives = 50/60 (83%)
Frame = +3
Query: 174 GLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 353
GL RK +L+K+LR+AKK APP KPE+VKTH R+++++P MVGS VG+Y+GKTF QVE+
Sbjct: 67 GLWRKQRSLLKRLRKAKKGAPPTEKPEVVKTHPRDVLLLPAMVGSTVGVYDGKTFKQVEM 126
Score = 35.5 bits (78), Expect = 0.73
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2
Query: 29 AEVDETLKKKRIFRKFTYRGVDLDQLL 109
AEV + +KK+ FR FT RGVDLDQLL
Sbjct: 15 AEVQQ--QKKQTFRNFTQRGVDLDQLL 39
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 83.4 bits (197), Expect = 3e-15
Identities = 51/89 (57%), Positives = 54/89 (60%)
Frame = -2
Query: 469 YLSGMNLELCVAPIPGLPCFTGLYVTENSPR*WPIISGLISTWLKVFPL*MPTIEPTISG 290
YLSGMNLE P PC TG YV SPR PIISGLIST L PL PT EPTISG
Sbjct: 11 YLSGMNLE---PERPARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPTISG 67
Query: 289 TMIMFLK*VFTISGXSFGGASFLARRSFL 203
M M + V T+SG S + LA RSFL
Sbjct: 68 MMGMLRRCVRTVSGFSIPTTAALALRSFL 96
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 63.3 bits (147), Expect = 3e-09
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +3
Query: 210 LRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI-KPEMIGHYLGE 386
L+ + + P+ P+ + HL NMIIV EM+G IVG+YNGKT NQV I KP+ I HYL
Sbjct: 11 LKTKTRGSIPSENPKQTRIHLYNMIIVLEMIGYIVGVYNGKTLNQVGILKPKKICHYLTS 70
Query: 387 FS 392
S
Sbjct: 71 LS 72
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +3
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
+K+ P + K L + + + K ++KT+ R+ I+PEMV + +YNGKTF + I
Sbjct: 5 IKKGPF-IEKSLYQKVLSSFGSEKRVVIKTYSRSSTIIPEMVSLTISVYNGKTFIPIYIT 63
Query: 357 PEMIGHYLGEFSVT 398
+++GH LGEFS T
Sbjct: 64 EDLVGHKLGEFSPT 77
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = +3
Query: 261 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 422
KT RN I+P+M+G + ++NGK FN+V I EMIG+ LGEFS T H +
Sbjct: 25 KTWSRNSTIIPKMIGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 54.8 bits (126), Expect = 1e-06
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +3
Query: 186 KPMALVKKLRR--AKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 359
+PM +L+R + ++A + K R I+P+ VG+IV +YNGK F ++I
Sbjct: 23 RPMGEDTRLKREGSTEQAFVTKSSSLQKIWSRRSCILPQFVGNIVSVYNGKNFVNLKITD 82
Query: 360 EMIGHYLGEFSVTYKPVK 413
EM+GH GEF+ T K K
Sbjct: 83 EMVGHKYGEFASTRKIAK 100
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 54.8 bits (126), Expect = 1e-06
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +3
Query: 252 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 398
++V+T+ R I+PE VG + ++NGKTF V I +M+GH LGEF+ T
Sbjct: 154 KVVRTYSRATTIIPEFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPT 202
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +3
Query: 237 PNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 404
P + ++T R+ I+P VG I+NGK +N+V I +M+GH LGEFS T K
Sbjct: 28 PGVRTLPIRTQARSATILPNFVGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 54.0 bits (124), Expect = 2e-06
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +3
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
LK+ P + L + + A + KP +KT R +I+PEMVG + ++NGK V +
Sbjct: 5 LKKGPF-VDHHLAKKVESAAGSKKP--IKTWSRRSMILPEMVGITIAVHNGKNHIPVLVN 61
Query: 357 PEMIGHYLGEFSVTYKPVKHG 419
M+GH LGEF+VT HG
Sbjct: 62 ENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 53.2 bits (122), Expect = 3e-06
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = +3
Query: 252 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 398
++VKT+ R+ ++ + V + ++NGKTF + I PEM+GH LGEF+ T
Sbjct: 88 KVVKTYSRDSQVISDFVNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 52.8 bits (121), Expect = 5e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +3
Query: 234 PPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 392
PP P I KT R+ I+P VG ++NGKT+N+V I EM+G LGEFS
Sbjct: 3 PPPGTPAI-KTQARSATILPNFVGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 52.0 bits (119), Expect = 8e-06
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +3
Query: 258 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 404
+KT +R+ I+P MVG+ ++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 50 IKTAVRSATILPRMVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 49.6 bits (113), Expect = 4e-05
Identities = 28/74 (37%), Positives = 39/74 (52%)
Frame = +3
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
LK+ P LR+ +K + EI+ T R I+P M+G + I+NG+ V I
Sbjct: 5 LKKNPFVAKHLLRKIEK-LNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYII 63
Query: 357 PEMIGHYLGEFSVT 398
M+GH LGEFS T
Sbjct: 64 DLMVGHKLGEFSPT 77
>UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellular
organisms|Rep: 30S ribosomal protein S19 -
Wigglesworthia glossinidia brevipalpis
Length = 92
Score = 49.2 bits (112), Expect = 6e-05
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
LK+ P L++ + E K ++++T R I P+M+G + ++NGK + I
Sbjct: 5 LKKGPFIDFHLLKKIE-EIKQTGKKKLIRTWSRRSTIFPDMIGMTISVHNGKQHIPIFIG 63
Query: 357 PEMIGHYLGEFSVT 398
EM+GH LGEF T
Sbjct: 64 DEMVGHKLGEFVPT 77
>UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10;
Rickettsiales|Rep: Ribosomal protein S19 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 94
Score = 48.8 bits (111), Expect = 7e-05
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 195 ALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPE-MIG 371
++++ + RA K+ N +++K H R +I+P +G +YNGK + V + + MIG
Sbjct: 14 SVLRLVNRALKQGSIN---KVIKIHSRASVILPNCLGLKFAVYNGKDYIPVSVNDQNMIG 70
Query: 372 HYLGEFSVTYKPVKH 416
H GEFS T K H
Sbjct: 71 HKFGEFSPTRKFAGH 85
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 48.8 bits (111), Expect = 7e-05
Identities = 23/74 (31%), Positives = 42/74 (56%)
Frame = +3
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
LK+ P +++ + +A + K +++KT R I P +G + +Y+G+ V I+
Sbjct: 5 LKKGPFVDEHLMKKVEAQAN-DEKKKVIKTWSRRSTIFPSFIGYTIAVYDGRKHVPVYIQ 63
Query: 357 PEMIGHYLGEFSVT 398
+M+GH LGEF+ T
Sbjct: 64 EDMVGHKLGEFAPT 77
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 48.4 bits (110), Expect = 1e-04
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +3
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
L K + KL+R KK ++KT R+ IVP M+G I+ ++NG+ V I
Sbjct: 27 LTSKKQEKLVKLQRKKKII------SVIKTWSRSSTIVPLMIGEIIAVHNGREHIPVYIT 80
Query: 357 PEMIGHYLGEFSVT 398
EM+G LGEF+ T
Sbjct: 81 EEMVGFKLGEFATT 94
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +3
Query: 237 PNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 392
P + ++T R+ I+P VG ++NGK ++ V I EM+GH LGEFS
Sbjct: 71 PGKRVAPIRTQARSATILPNFVGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 258 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 404
++T+ R I+P+ VG I+NGK + +EI +M+GH LGEF+ T K
Sbjct: 33 IRTNARAATILPQFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +3
Query: 261 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 416
K + R ++ P+ +G V IYNG + ++IK +MIGH GEF+ T K H
Sbjct: 27 KIYSRRSVVSPKFIGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 252 EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 398
+I+K + R +I P+ + V IYNG F ++I MIGH GEFS+T
Sbjct: 22 KIIKIYSRRSVIYPQYLNKKVKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19,
putative; n=2; Pezizomycotina|Rep: Mitochondrial
ribosomal protein S19, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 89
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = +3
Query: 222 KKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTY 401
+K PP P I KT R I+P VG ++NGKT+ V I +M+G LGE+ T
Sbjct: 20 RKLPPPPGTPPI-KTQKRGATILPNFVGLRFAVHNGKTYQDVLITEDMVGRKLGEYVPTR 78
Query: 402 K 404
K
Sbjct: 79 K 79
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +3
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
LK+ P + L++ +K K + +T R I P M+G + ++NG+ V +
Sbjct: 5 LKKGPFIDLHLLKKVEKAVESGDKKPL-RTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVT 63
Query: 357 PEMIGHYLGEFSVT 398
EM+GH LGEF+ T
Sbjct: 64 DEMVGHKLGEFAPT 77
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +3
Query: 273 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 422
R I+PE V S V IYNGKT + +I +GH GEF+ T K KH +
Sbjct: 161 RRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +3
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
+K+ P+ L + +K+ K ++++T R+ I P VG + +YNG+ V I
Sbjct: 5 VKKGPIVASHLLAKIEKQKNLKNK-KVIQTWSRSSTITPIFVGHKIAVYNGREHIPVYIT 63
Query: 357 PEMIGHYLGEFSVT 398
M+GH LGEFS T
Sbjct: 64 ENMVGHKLGEFSPT 77
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = +3
Query: 264 THLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 404
T R I P VG + IYNGK +IKPEM+GH LGEF T K
Sbjct: 28 TWSRRSTIYPAAVGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTRK 74
>UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellular
organisms|Rep: 30S ribosomal protein S19 -
Propionibacterium acnes
Length = 93
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +3
Query: 177 LKRKPMA---LVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQV 347
LK+ P L KK+ A+ EA + ++KT R ++ P+M+G +G+++G+ V
Sbjct: 5 LKKGPFVDEHLAKKVT-AQNEAGTH---NVIKTWSRRSMVTPDMIGHTIGVHDGRKHVPV 60
Query: 348 EIKPEMIGHYLGEFSVT 398
+ M+GH LGEF+ T
Sbjct: 61 FVTESMVGHKLGEFAPT 77
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 46.4 bits (105), Expect = 4e-04
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +3
Query: 273 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 422
R I+P+ VG IYNGK F ++I EM+GH GEF+ T K G+
Sbjct: 28 RRSCILPQFVGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = +3
Query: 273 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 416
R I+P+ VG ++NGK F V I EMIGH GEF+ T K H
Sbjct: 76 RRSTILPDFVGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +3
Query: 234 PPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVK 413
P K + ++T R I+P+ VG ++NGK + V + +M+G LGE++ T KP +
Sbjct: 24 PWATKKQPIQTDKRAATIIPQFVGVTFHVHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFR 83
Query: 414 H 416
+
Sbjct: 84 Y 84
>UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 152
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/67 (38%), Positives = 36/67 (53%)
Frame = +3
Query: 189 PMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMI 368
P+ L +KL A PN P +KT R+ I+P VG ++NGK + V I EM+
Sbjct: 20 PLPLPRKLPPA-----PNTPP--IKTQKRSATILPNFVGLRFSVHNGKNYQDVLITEEMV 72
Query: 369 GHYLGEF 389
G LGE+
Sbjct: 73 GRKLGEY 79
>UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein S19 - Cafeteria
roenbergensis
Length = 84
Score = 42.7 bits (96), Expect = 0.005
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 240 NXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 419
N K I KT R I+P ++ VG+++G TF ++ M+G+ LGEF T + ++G
Sbjct: 23 NDKNVIYKTQARGSTILPLIMNINVGVHDGYTFFKLTPNASMVGYKLGEFVRTRQAFRYG 82
Query: 420 R 422
+
Sbjct: 83 K 83
>UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S19 -
Astasia longa (Euglenophycean alga)
Length = 118
Score = 41.9 bits (94), Expect = 0.008
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 180 KRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 359
K+ P + K N K ++V T R+ + P MVG + +YNGK + I
Sbjct: 6 KKSPFISYRLFNTIDKMNLKNLK-QLVFTKSRSSTVFPSMVGHNISVYNGKNYVPFLILN 64
Query: 360 EMIGHYLGEFSVT 398
+MI LGEFS T
Sbjct: 65 QMISSKLGEFSRT 77
>UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|Rep:
Ribosomal protein S19 - Saprolegnia ferax
Length = 82
Score = 41.5 bits (93), Expect = 0.011
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +3
Query: 240 NXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 404
N + + +K +N++I+P+ + +YNG+ F +++I +M+G+ GEF T K
Sbjct: 17 NNQKKWIKIFNKNLVIMPQDIDLTFNVYNGQNFIKLKIVKDMLGYKFGEFINTRK 71
>UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum
parvifolium|Rep: Ribosomal protein S19 - Gnetum
parvifolium
Length = 115
Score = 41.5 bits (93), Expect = 0.011
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +3
Query: 198 LVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHY 377
L+ K+ + K+ N K +I+ T R IVPEMVG ++NGK V I M+
Sbjct: 31 LLTKIEKLKR----NKKQKIIITWSRASTIVPEMVGYTFAVHNGKEHLPVYITENMLYQK 86
Query: 378 LGEFSVT 398
LG+F+ T
Sbjct: 87 LGDFAPT 93
>UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S19 -
Pseudendoclonium akinetum (Green alga)
Length = 116
Score = 40.3 bits (90), Expect = 0.026
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 258 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 404
++ + R+ IVP M+G+ V I+ G F ++ I +G+ LGEF+ T K
Sbjct: 58 IQVYQRSSTIVPGMIGNTVKIHTGHKFVKLSITEHTVGYKLGEFAPTKK 106
>UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2;
Dictyosteliida|Rep: Ribosomal protein S19 -
Dictyostelium discoideum (Slime mold)
Length = 87
Score = 39.9 bits (89), Expect = 0.034
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = +3
Query: 249 PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 428
P IV T R+ +IVP + + +YNG+ + V+I + +G LGE+ +T K K+ G
Sbjct: 24 PTIVTTE-RSSVIVPYYLTKTIYVYNGRKYVGVKITEKSLGRKLGEYVLTKKVEKYKASG 82
>UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 78
Score = 39.1 bits (87), Expect = 0.060
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 273 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 404
R+ I+P +V I+NGK F + + E IGH GEF+ T K
Sbjct: 28 RDSTILPSLVNKQYKIFNGKRFIRFRVTEETIGHKFGEFASTRK 71
>UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_74, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 101
Score = 39.1 bits (87), Expect = 0.060
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +3
Query: 174 GLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEI 353
G K+ P + K L R + EI+ T R I++P M+G + I+NG + I
Sbjct: 13 GEKKGPF-IAKNLLRKIVMLNTMWEKEIIVTWSRTSIVIPTMIGHTITIHNGNEHLLIYI 71
Query: 354 KPEMIGHYLGEFSVT 398
M+ H L +FS T
Sbjct: 72 TDCMVDHKLAKFSST 86
>UniRef50_Q06FM4 Cluster: Ribosomal protein S19; n=1; Pelargonium x
hortorum|Rep: Ribosomal protein S19 - Pelargonium
hortorum (Common geranium)
Length = 124
Score = 38.7 bits (86), Expect = 0.079
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +3
Query: 177 LKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIK 356
+KR P L++ +K + + +KT R I+P M+G + I+NG+ + I
Sbjct: 16 VKRNPFVANPLLKKIEK-LNAKAQKDFLKTWSRASTIIPAMIGYTIYIHNGREHVPIPIT 74
Query: 357 PEMIGHYLGEFSVT 398
M+ + LG+F T
Sbjct: 75 KYMVNYKLGDFVPT 88
>UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19;
n=54; Eukaryota|Rep: Chloroplast 30S ribosomal protein
S19 - Oryza sativa (Rice)
Length = 93
Score = 38.7 bits (86), Expect = 0.079
Identities = 26/73 (35%), Positives = 33/73 (45%)
Frame = +3
Query: 180 KRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKP 359
K P L + +K K IV T R I+P MVG + I+NGK + I
Sbjct: 5 KTNPFVAHHLLAKIEKVNMKEEKETIV-TWSRASSILPAMVGHTIAIHNGKEHIPIYITN 63
Query: 360 EMIGHYLGEFSVT 398
M+G LGEF T
Sbjct: 64 PMVGRKLGEFVPT 76
>UniRef50_A2DH24 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 89
Score = 35.9 bits (79), Expect = 0.56
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -1
Query: 389 ELSEVMADHLRLDFNLVKSFSVVNADN*TDHLGNDDHVSQVSLHDLWLXIRRSL--FLGA 216
++S+ +A+H LD N ++ + ++AD + D+H+++V L + W+ + +L
Sbjct: 17 DISKNVANHFWLDLNFEENVANIDADIYINKFWKDNHIAEVCLDNWWMNVCLALNSLTSL 76
Query: 215 TQLLDQ 198
QLLD+
Sbjct: 77 LQLLDK 82
>UniRef50_Q6HT65 Cluster: ComE operon protein 1; n=22; Bacillus|Rep:
ComE operon protein 1 - Bacillus anthracis
Length = 199
Score = 34.3 bits (75), Expect = 1.7
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 225 KEAPPNXKPEIVKTHLRNMIIVPEMVGSIV--GIYNGKTFNQVEIKPEMIGHYLGE 386
KE KP+I T L+ IIV +M G++V G+Y K ++V+ E G +L E
Sbjct: 43 KEIEKKSKPKISDTKLQKKIIVIDMKGAVVKEGVYEMKEGDRVKDAIEKAGGFLPE 98
>UniRef50_Q9G8T6 Cluster: Ribosomal protein S19; n=1; Rhodomonas
salina|Rep: Ribosomal protein S19 - Rhodomonas salina
(Cryptomonas salina)
Length = 72
Score = 34.3 bits (75), Expect = 1.7
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 240 NXKPEIVKTHLRNMIIVPEMVGSIVGIYNGK-TFNQVEIKPEMIGHYLGEFSVTYK 404
N + +K RN I P +G + NG+ + +++I +M+G +GEF +T K
Sbjct: 15 NSAEKELKIISRNTTIFPSFIGKYFLVKNGENSLRKIQISVDMVGLKIGEFVITKK 70
>UniRef50_Q8IB15 Cluster: Putative uncharacterized protein
MAL8P1.71; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL8P1.71 - Plasmodium
falciparum (isolate 3D7)
Length = 372
Score = 33.5 bits (73), Expect = 3.0
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = +2
Query: 215 SRQERGSSE*XARDREDSLEKHDHRSRDGRFNCRHLQRKNF*PG*NQA*DDRPLPRRVLS 394
SR + R+R SLEKH HR RD + RH R+ DDR RR LS
Sbjct: 144 SRSRERNKHRSGRNRSRSLEKHRHRRRDSHRH-RHDDRRRSRSRDKYRHDDRHRSRRRLS 202
Query: 395 H 397
+
Sbjct: 203 Y 203
>UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Rep:
AAA ATPase - Bacillus sp. B14905
Length = 569
Score = 33.1 bits (72), Expect = 3.9
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 306 SIVGIYNGKT-----FNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFI 458
S+VG+ N K N ++I+ + H L F +TY V G PG G T +R I
Sbjct: 302 SLVGLPNAKKELHNLINFIKIQSLRVDHGLTSFPITYHLVFFGNPGTGKTTVARII 357
>UniRef50_Q8HIT4 Cluster: Ribosomal protein S19; n=1; Monosiga
brevicollis|Rep: Ribosomal protein S19 - Monosiga
brevicollis
Length = 77
Score = 32.7 bits (71), Expect = 5.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 273 RNMIIVPEMVGSIVGIYNGKTFNQVEIKPEM--IGHYLGEFSVTYKPVKHGR 422
RN+ I PE V + I G + V+I + IGH GEF+V+ P + R
Sbjct: 21 RNITITPEDVNKNINIETGNSKKSVKINVTIKHIGHKTGEFAVSKIPAVYKR 72
>UniRef50_Q7YN78 Cluster: Ribosomal protein S19; n=1; Eimeria
tenella|Rep: Ribosomal protein S19 - Eimeria tenella
Length = 88
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 261 KTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 389
KT+ + +I+P + I+ IYNGK + + I + IG L F
Sbjct: 27 KTNNNSTLILPLFLWKIIEIYNGKRYIPININKKKIGFILKNF 69
>UniRef50_Q9MTE4 Cluster: Ribosomal protein S19; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S19 - Toxoplasma gondii
Length = 70
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 258 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 389
+K + + +II P ++ ++ +Y GK+F + I + IG L F
Sbjct: 26 IKLYYKYLIITPFLIWKLMEVYTGKSFITINITKDKIGRSLQYF 69
>UniRef50_Q6FLN2 Cluster: Similar to sp|P18480 Saccharomyces
cerevisiae YBR289w SNF5; n=1; Candida glabrata|Rep:
Similar to sp|P18480 Saccharomyces cerevisiae YBR289w
SNF5 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1030
Score = 32.3 bits (70), Expect = 6.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -1
Query: 287 DDHVSQVSLHDLWLXIRRSLFLGATQLLDQCHW 189
++H+S++ D+ + I+ + +G TQL+DQ W
Sbjct: 493 EEHLSRIGGDDMRITIKLDIVVGQTQLIDQFEW 525
>UniRef50_Q4UGR2 Cluster: Bromodomain protein, putative; n=1;
Theileria annulata|Rep: Bromodomain protein, putative -
Theileria annulata
Length = 1904
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = -2
Query: 139 NSMSCSLGICKELIEINSPVSE--LPENTLFLEGFV 38
NS+ C++G C+ I INSP S+ L +N L L+ +V
Sbjct: 1027 NSLLCTVGQCEPKITINSPKSKNYLEDNKLLLKAWV 1062
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,666,691
Number of Sequences: 1657284
Number of extensions: 8481335
Number of successful extensions: 21021
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 20469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21000
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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