Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP02_F_B03
         (518 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p pro...   213   1e-55
AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB...   213   1e-55
AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA...   213   1e-55
AY058318-1|AAL13547.1|  872|Drosophila melanogaster GH08353p pro...    28   6.6  
AE014296-3271|AAF49077.2|  872|Drosophila melanogaster CG14183-P...    28   6.6  

>AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p
           protein.
          Length = 148

 Score =  213 bits (520), Expect = 1e-55
 Identities = 97/120 (80%), Positives = 105/120 (87%)
 Frame = +3

Query: 108 LHMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMII 287
           L MPN QL+ELMH         GLKRKPMAL+KKLR+AKKEAPPN KPEIVKTHLRNMII
Sbjct: 29  LDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKEAPPNEKPEIVKTHLRNMII 88

Query: 288 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
           VPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 89  VPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK 148



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +2

Query: 32  EVDETLKKKRIFRKFTYRGVDLDQLL 109
           +VDE LKKKR F+KFTYRGVDLDQLL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLL 29


>AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB,
           isoform B protein.
          Length = 147

 Score =  213 bits (520), Expect = 1e-55
 Identities = 97/120 (80%), Positives = 105/120 (87%)
 Frame = +3

Query: 108 LHMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMII 287
           L MPN QL+ELMH         GLKRKPMAL+KKLR+AKKEAPPN KPEIVKTHLRNMII
Sbjct: 28  LDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKEAPPNEKPEIVKTHLRNMII 87

Query: 288 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
           VPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 88  VPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK 147



 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +2

Query: 26  MAEVDETLKKKRIFRKFTYRGVDLDQLL 109
           M +VDE LKKKR F+KFTYRGVDLDQLL
Sbjct: 1   MQQVDENLKKKRTFKKFTYRGVDLDQLL 28


>AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA,
           isoform A protein.
          Length = 148

 Score =  213 bits (520), Expect = 1e-55
 Identities = 97/120 (80%), Positives = 105/120 (87%)
 Frame = +3

Query: 108 LHMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNXKPEIVKTHLRNMII 287
           L MPN QL+ELMH         GLKRKPMAL+KKLR+AKKEAPPN KPEIVKTHLRNMII
Sbjct: 29  LDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKLRKAKKEAPPNEKPEIVKTHLRNMII 88

Query: 288 VPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 467
           VPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 89  VPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSSRFIPLK 148



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +2

Query: 32  EVDETLKKKRIFRKFTYRGVDLDQLL 109
           +VDE LKKKR F+KFTYRGVDLDQLL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLL 29


>AY058318-1|AAL13547.1|  872|Drosophila melanogaster GH08353p
           protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 198 LVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYN 326
           L+KK  R KK  PP  K    K +    ++  E+V  +  IY+
Sbjct: 20  LIKKQNRLKKIEPPEEKAVSYKIYAELYVLYVELVNKLSFIYH 62


>AE014296-3271|AAF49077.2|  872|Drosophila melanogaster CG14183-PA
           protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 198 LVKKLRRAKKEAPPNXKPEIVKTHLRNMIIVPEMVGSIVGIYN 326
           L+KK  R KK  PP  K    K +    ++  E+V  +  IY+
Sbjct: 20  LIKKQNRLKKIEPPEEKAVSYKIYAELYVLYVELVNKLSFIYH 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,038,965
Number of Sequences: 53049
Number of extensions: 402115
Number of successful extensions: 1191
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)